|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:225548..229681+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004155 ID=XLOC_004155|Name=XLOC_004155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4134bp|location=Sequence derived from alignment at sc0000376_pilon:225548..229681+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCCAAATCAATACTCATCTTGAGCATTTCAATACTGGTTATGGT
CAATGTCCATCAATGTAAAGCAAATCTCAACTCTGGCACAGAGAACGAAA
TCGTATTGGGGATGTTTGCAAAGTGCGAGAAGGATACAGTCAAAGGCCCA
AATATCATTGCGACGGAATTAAGCAACCTGATGTCAAGATTCCAATTTTT
AATAAGCCGACCACCTTTTAGTTTCGTCTATCACAATGCTGATGTTTGTA
GCTATCAAGATTTATTGAATACCTTAATTGACTTGTTCACCACTAATGAG
TTTTCTACCAGTCAAGATACAAAGGTAATTCTATTCTTTGacacggaaag
tcatgtgacatctttttcaaccaataagatttaacccTAATCggcctaag
ggggggggggtgattctgtatttcgagggtaaaacagtcatatggtttaa
ctcactaaaagattatgtttactgaaaacacataattaatctttagtaag
tgttctgttctaccccagttctgacgtcatgccgtggcgAAGAATATCTA
ACTCTTtcaacacacccctgtctcagtcaACCAATGACGCTTAGTCTTAT
ATCAACTCTAACGTCCCGAATTATATggataattttcgaaaatctttcgG
ATCCCCTCCATCTTATAAGAACCCCTGTTaattaatttcatattttttgt
ttttgattttcatcatttcaagagtatttttgtgcattttcctAGGAACA
AATtgtgtgttttagagtccgtgaAACCCACCCTCGTGTTTCTTAGTAAT
ATTTCTAGTGTTTTTATTAATAGATTTTACtgcttgaaagatcaaaatta
gaTAGATtagataaaatttgataaaagcAAAAATCTTTCAGCCGCTCTTT
TCTTTATTAGGTCAAGCATATTGTGGTATACCTACCTGAAGAGATGCTTA
AACTTCTGTTATCCTTGGTTTCGCATACTGACATTATCATATGGCCTTTG
CAATTAATACAAGATTTGGTCTGGTTCCAAGGTCACCCAAACTATGAAAA
GCTTCATCGGAAGGGTGTCCGAAAGCCGGCCGAAATGATATCGGACATGA
TGTCAACCTATGAGTGGCGTAACGCCCATGTTGTGGATTTAtttgaaatg
aataaaaatccAGAAGTTGACGTCCATAAACTAATCACGAAACTTCCAAG
AAGCACTTGTTTAAGCTATACAAGTTTTGAAATAGGTGGATCAAGCGTAC
CAGATAACTTACTGAAAGTTTTGGAACAACTAAAAGCAGAAAAGGAAGCT
TCAGTGATTTTTGTTGTCGGAACTGTAGGagggaaattcaaaaaactaGC
AGTTGAGAATGGAGTCAGTGGTAAATACTGGGTAATTTTCAGTGAATATA
CTGACCTTGAATCTAAAGATGAGTATATTAGTATTAAAAACAGTGGCGAT
ATTATGTACTCTGGTTCCTTGGTATTCCATAACGATCGATGTGCACCTGG
TAAGAAAATGACTGACTGTCTGGAAGAGAACACAGAGATGAGGGACACGG
TTTACAGGTTAAAACGCAACCGAATTGTACAAGTACGATATATAAGTATC
AATACGTGGAAAGAAACCCGCAACTACCATCAAATGGAATATTTACAACT
TTACAATGGAAGTCataataaatttttgttgtcatTGGATCAAGTGAAGT
ATACAGAAACTTTCTTAGAAACAAGGGTGAAATCAAAATGCAGGAAATGT
CTTTATTGTCAAGATTTGTGTCCGGATGATACAGCTGTCCTAAATATAGA
ACCAGGTAAGGTAATTTTATACAAAGCCATTCTAAGCCTTCTAACATCTC
GGGTCGCCTCGTTGTCTTCAAAAGTGCAAAGACACAAACTCGCTAATGTT
CCCGaccaataattttcaaaattaacgaACAATAGCTTGGTGGCTAATGA
AGCGAAAGCAAATTAATAATATTCTtcaaatagtgctttttgaaattgat
ttaaTTTTCACATGGGGCTTTCGATATTTCAAATTAATATTTTAAAGGTa
taccttttcttttttccaaaaaaaagaagattccTTTGATAACAGGTGAC
GAAGCCCTACATACAATGTTTAATGATGTTGAAAACGCTGTATGCCAGGT
TTTGGGCCAATAGTCACAATGTCACAAGGGGATCTTTTAAATGGTGATGT
GACAACCTAAGATATATTCcagttttagaaaaatgaaatagaaatgtTGA
TGTTAATTTGGATGGGCAACATAAGATTCTAAAACCAATAGATAGTTACG
CTATATCATTTTTCTTGGCTTAAAAGTTCTAAAATGGGAGACAAGATTAG
TTTTTGATTAATTCATGATTATGTTCTGTCAAAGGTTATTATGACAAGAA
ATTTGGTTTGACTTGTCAAAAATGTCCGCTTACAAATCGAATTACAGAAT
ACGGACAGTGCTCATTGTGTGGCGATGGTTTGAAACTCAACAAAAACCAA
ACAGTATGCTATGACCCAGTCCACCAATTTGAAATTCATCCTTCATGTTA
TGTAATCTCAATATTGGGGATTGGAATTAGCCTTTTTATCTTGATTATTT
ATTGGATATACCGTGAAACCCCTGTCGTCAAATCAAGTAATTTCGAATTG
TCAATCATTCAGCTCATATTCTGCATCTTGTTGCATTCATCATTTTTCGT
GTTTGTGGTACACAAACCTACACAAATGATTTGCACAGTTCGTCCAGTCG
TTTTCTCTACACTCCTTGTAGCAGTCGTATCCATCGTGGTATGCAAAGCG
GAGAAGATTCTGATCATTTTTTACACGCGCCGACGAATGACACCTAAGGA
TATCAAGGTAAAACTTTTTACTTCGAAGCCatgtgtatctcacgtttatc
gtttcgtagtacactctgtgcgcattgtctgtttcataaaaaaattcccg
tacggagacctctgcgatgaagtatgattttataaacaaaaattctctcg
tcgtctcccctctctcaccatcACCAatactccatcgcagcggtcggttt
gaaaaatctcaaatgagaaaaacactgacaacagaccgggggggggggta
ggcaATTCCCTAAAACCAGGTTTCACCCCCCGGGCAACAGACCCTCtaca
gcaatgaattttgaaattagccgtagatactgggtctgtgcaCACACAAC
GAAGCCATGGACTTTTGCTACTATAGAGAAAGCATTAATTAGATTAGTTT
CCCCTGAAATTGGTTTCCACAAGATGGCaaataaaggagttcaaatttaa
agcgaatttttgaaattaaattttgaaattaaaaaattgagaatattctA
CTGTTTTTGTTGTTCTGTTCCTTATTATTCAAGGTTTATTATTATCTTGT
TGTTCATACTGATGGCTTTTCTGTGTTAAGCTTTTCGCAGGATATGCCAC
TGAGAAATTACAGAATACTCTTTGCTGAATCGACCTTTGgttaaaaaaat
acttcttaTAGCTAAAGTCTCTCGGTAATTTGAACAAGTAGAATTTCACG
TTCAAAAGTTCGAATTCTGGATAATCAATGGTAGGCTTTTCTTAATGTTT
TAGGACATCACTATGAGGCAATTGGTCATTTTCAGCTTTCTGATTAGCAT
TAACTTCATTTTGGTACCTGCTGTATTTACATTGCCAGCTTCAGTGGAAT
CGTCCCCTTTGGAGAATCAAGAAGGTTACGTGCAGGAGTTTTGTTCTTCC
GATTATGAATTCTACCTTCAAACCATATATGCCATTGTCATTCTGCTTCT
ATCAATTGTTCAAGGATATCGCGGTCGTAAACTTCCAGCTAATTACAATG
AGGGGAATTCGATTTGTTTGGCTTCAGCTACGACCTTATCAGCTCTGGCT
TTTTGCATCTGGATTTTACGCAGTAATCAAAAATCTTTGGACGTGTATAA
CAGGATTACCATGACGTGGGTCTCCCTTTCAACAGCCTTAATCTTTATTG
TGCTCTGTTTACACGGCGTTaaagtttttgtcattttgtttcAAGGACAT
AAAAACACCAAGACCTACCAACTTCATGCCATGCTTGCTGATACAATGAG
GGATATCGAGAAAGTAACTTTGAATCCGAGAAAA Coding sequence (CDS) from alignment at sc0000376_pilon:225548..229681+ >XLOC_004155 ID=XLOC_004155|Name=XLOC_004155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4446bp|location=Sequence derived from alignment at sc0000376_pilon:225548..229681+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCCAAATCAATACTCATCTTGAGCATTTCAATACTGGTTATGGT
CAATGTCCATCAATGTAAAGCAAATCTCAACTCTGGCACAGAGAACGAAA
TCGTATTGGGGATGTTTGCAAAGTGCGAGAAGGATACAGTCAAAGGCCCA
AATATCATTGCGACGGAATTAAGCAACCTGATGTCAAGATTCCAATTTTT
AATAAGCCGACCACCTTTTAGTTTCGTCTATCACAATGCTGATGTTTGTA
GCTATCAAGATTTATTGAATACCTTAATTGACTTGTTCACCACTAATGAG
TTTTCTACCAGTCAAGATACAAAGATGGCCTCCAAATCAATACTCATCTT
GAGCATTTCAATACTGGTTATGGTCAATGTCCATCAATGTAAAGCAAATC
TCAACTCTGGCACAGAGAACGAAATCGTATTGGGGATGTTTGCAAAGTGC
GAGAAGGATACAGTCAAAGGCCCAAATATCATTGCGACGGAATTAAGCAA
CCTGATGTCAAGATTCCAATTTTTAATAAGCCGACCACCTTTTAGTTTCG
TCTATCACAATGCTGATGTTTGTAGCTATCAAGATTTATTGAATACCTTA
ATTGACTTGTTCACCACTAATGAGTTTTCTACCAGTCAAGATACAAAGGT
CAAGCATATTGTGGTATACCTACCTGAAGAGATGCTTAAACTTCTGTTAT
CCTTGGTTTCGCATACTGACATTATCATATGGCCTTTGCAATTAATACAA
GATTTGGTCTGGTTCCAAGGTCACCCAAACTATGAAAAGCTTCATCGGAA
GGGTGTCCGAAAGCCGGCCGAAATGATATCGGACATGATGTCAACCTATG
AGTGGCGTAACGCCCATGTTGTGGATTTAtttgaaatgaataaaaatccA
GAAGTTGACGTCCATAAACTAATCACGAAACTTCCAAGAAGCACTTGTTT
AAGCTATACAAGTTTTGAAATAGGTGGATCAAGCGTACCAGATAACTTAC
TGAAAGTTTTGGAACAACTAAAAGCAGAAAAGGAAGCTTCAGTGATTTTT
GTTGTCGGAACTGTAGGagggaaattcaaaaaactaGCAGTTGAGAATGG
AGTCAGTGGTAAATACTGGGTAATTTTCAGTGAATATACTGACCTTGAAT
CTAAAGATGAGTATATTAGTATTAAAAACAGTGGCGATATTATGTACTCT
GGTTCCTTGGTATTCCATAACGATCGATGTGCACCTGGTAAGAAAATGAC
TGACTGTCTGGAAGAGAACACAGAGATGAGGGACACGGTTTACAGGTTAA
AACGCAACCGAATTGTACAAGTACGATATATAAGTATCAATACGTGGAAA
GAAACCCGCAACTACCATCAAATGGAATATTTACAACTTTACAATGGAAG
TCataataaatttttgttgtcatTGGATCAAGTGAAGTATACAGAAACTT
TCTTAGAAACAAGGGTGAAATCAAAATGCAGGAAATGTCTTTATTGTCAA
GATTTGTGTCCGGATGATACAGCTGTCCTAAATATAGAACCAGGTCAAGC
ATATTGTGGTATACCTACCTGAAGAGATGCTTAAACTTCTGTTATCCTTG
GTTTCGCATACTGACATTATCATATGGCCTTTGCAATTAATACAAGATTT
GGTCTGGTTCCAAGGTCACCCAAACTATGAAAAGCTTCATCGGAAGGGTG
TCCGAAAGCCGGCCGAAATGATATCGGACATGATGTCAACCTATGAGTGG
CGTAACGCCCATGTTGTGGATTTAtttgaaatgaataaaaatccAGAAGT
TGACGTCCATAAACTAATCACGAAACTTCCAAGAAGCACTTGTTTAAGCT
ATACAAGTTTTGAAATAGGTGGATCAAGCGTACCAGATAACTTACTGAAA
GTTTTGGAACAACTAAAAGCAGAAAAGGAAGCTTCAGTGATTTTTGTTGT
CGGAACTGTAGGagggaaattcaaaaaactaGCAGTTGAGAATGGAGTCA
GTGGTAAATACTGGGTAATTTTCAGTGAATATACTGACCTTGAATCTAAA
GATGAGTATATTAGTATTAAAAACAGTGGCGATATTATGTACTCTGGTTC
CTTGGTATTCCATAACGATCGATGTGCACCTGGTAAGAAAATGACTGACT
GTCTGGAAGAGAACACAGAGATGAGGGACACGGTTTACAGGTTAAAACGC
AACCGAATTGTACAAGTACGATATATAAGTATCAATACGTGGAAAGAAAC
CCGCAACTACCATCAAATGGAATATTTACAACTTTACAATGGAAGTCata
ataaatttttgttgtcatTGGATCAAGTGAAGTATACAGAAACTTTCTTA
GAAACAAGGGTGAAATCAAAATGCAGGAAATGTCTTTATTGTCAAGATTT
GTGTCCGGATGATACAGCTGTCCTAAATATAGAACCAGGTTATTATGACA
AGAAATTTGGTTTGACTTGTCAAAAATGTCCGCTTACAAATCGAATTACA
GAATACGGACAGTGCTCATTGTGTGGCGATGGTTTGAAACTCAACAAAAA
CCAAACAGTATGCTATGACCCAGTCCACCAATTTGAAATTCATCCTTCAT
GTTATGTAATCTCAATATTGGGGATTGGAATTAGCCTTTTTATCTTGATT
ATTTATTGGATATACCGTGAAACCCCTGTCGTCAAATCAAGTAATTTCGA
ATTGTCAATCATTCAGCTCATATTCTGCATCTTGTTGCATTCATCATTTT
TCGTGTTTGTGGTACACAAACCTACACAAATGATTTGCACAGTTCGTCCA
GTCGTTTTCTCTACACTCCTTGTAGCAGTCGTATCCATCGTGGTATGCAA
AGCGGAGAAGATTCTGATCATTTTTTACACGCGCCGACGAATGACACCTA
AGGATATCAAGGTTATTATGACAAGAAATTTGGTTTGACTTGTCAAAAAT
GTCCGCTTACAAATCGAATTACAGAATACGGACAGTGCTCATTGTGTGGC
GATGGTTTGAAACTCAACAAAAACCAAACAGTATGCTATGACCCAGTCCA
CCAATTTGAAATTCATCCTTCATGTTATGTAATCTCAATATTGGGGATTG
GAATTAGCCTTTTTATCTTGATTATTTATTGGATATACCGTGAAACCCCT
GTCGTCAAATCAAGTAATTTCGAATTGTCAATCATTCAGCTCATATTCTG
CATCTTGTTGCATTCATCATTTTTCGTGTTTGTGGTACACAAACCTACAC
AAATGATTTGCACAGTTCGTCCAGTCGTTTTCTCTACACTCCTTGTAGCA
GTCGTATCCATCGTGGTATGCAAAGCGGAGAAGATTCTGATCATTTTTTA
CACGCGCCGACGAATGACACCTAAGGATATCAAGGACATCACTATGAGGC
AATTGGTCATTTTCAGCTTTCTGATTAGCATTAACTTCATTTTGGTACCT
GCTGTATTTACATTGCCAGCTTCAGTGGAATCGTCCCCTTTGGAGAATCA
AGAAGGTTACGTGCAGGAGTTTTGTTCTTCCGATTATGAATTCTACCTTC
AAACCATATATGCCATTGTCATTCTGCTTCTATCAATTGTTCAAGGATAT
CGCGGTCGTAAACTTCCAGCTAATTACAATGAGGGGAATTCGATTTGTTT
GGCTTCAGCTACGACCTTATCAGCTCTGGCTTTTTGCATCTGGATTTTAC
GCAGTAATCAAAAATCTTTGGACGTGTATAACAGGATTACCATGACGTGG
GTCTCCCTTTCAACAGCCTTAATCTTTATTGTGCTCTGTTTACACGGCGT
TaaagtttttgtcattttgtttcAAGGACATAAAAACACCAAGACCTACC
AACTTCATGCCATGCTTGCTGATACAATGAGGGATATCGAGAAAGTAACT
TTGAATCCGAGAAAAGACATCACTATGAGGCAATTGGTCATTTTCAGCTT
TCTGATTAGCATTAACTTCATTTTGGTACCTGCTGTATTTACATTGCCAG
CTTCAGTGGAATCGTCCCCTTTGGAGAATCAAGAAGGTTACGTGCAGGAG
TTTTGTTCTTCCGATTATGAATTCTACCTTCAAACCATATATGCCATTGT
CATTCTGCTTCTATCAATTGTTCAAGGATATCGCGGTCGTAAACTTCCAG
CTAATTACAATGAGGGGAATTCGATTTGTTTGGCTTCAGCTACGACCTTA
TCAGCTCTGGCTTTTTGCATCTGGATTTTACGCAGTAATCAAAAATCTTT
GGACGTGTATAACAGGATTACCATGACGTGGGTCTCCCTTTCAACAGCCT
TAATCTTTATTGTGCTCTGTTTACACGGCGTTaaagtttttgtcattttg
tttcAAGGACATAAAAACACCAAGACCTACCAACTTCATGCCATGCTTGC
TGATACAATGAGGGATATCGAGAAAGTAACTTTGAATCCGAGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376_pilon | genome | sc0000376_pilon:225548..229681 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1693-2223:3604 |
| Aaloc | 1222-1692:2387 |
| Aaloc | 325-1218:911 |
| Aaloc | 1-324:1 |
|
