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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000300_pilon:210996..217014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003866 ID=XLOC_003866|Name=XLOC_003866|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6019bp|location=Sequence derived from alignment at sc0000300_pilon:210996..217014- (Clytia hemisphaerica_ch_hm2_pilon)
TTAAGATGGAAACTTTTTGAGGTCTGGGACCAAGCACCTGATTGTAATAA
TGTTTATGTTCGAATCTGGATAGGGTAAGATATACAACTGCATTTCTTTT
TTGTAAACACGTAAGAACACAGGATCTACAACATACATACAACATATATT
ATTATCATTGAGTTTAAAGGCCCGAGGGCTAGAGAGAAACTTAGAAAACT
CCCACGCATGGTTTTTACACAAACGCCGAATTGAAAGTAAAATCTATCGT
TAGATTTCAGAAAATGCTCGAAAGCAAAGGGACTACTCCGTCCCTTGGAG
GATACAATCCACATCCCTTGGAGGATACAATCTGTCGTCATGATTGCGGG
GTGTTCTAGGCGCGTTCTGGATGAGAAATAAGTGGTTCACTTTTTCTTGC
CTGATAAAGGTTAGAGATTTTACTCTAGCCGTTCGGGCTTTAAATTCAAT
GATTTTTTTTAAATCTTCATAGATGTCCTGGATCCTTGAAAATGTTGACA
CGATTTTGTACGGCGAACGATTCAAATATCATACCACCTGATCTCTATTC
AAATGATCATTGCATGAAAATTGAATTTAATACACTCTCTACTATGACAA
GTAAGTTTTTTTGCTTGGGCCCTGGTGAGTCGTTTGAAGTGAGAGAGCCA
AAATTTTGTGCCGAAAACATTGTCGCCTCTTCCATGGTTAAGCGATGAAG
AATTCAACTTTTTAATAATAATAGTTTTTCATGTGTTAACCCTGAAAGGA
TTAGTTTGGCCATAAACCTTCGAAGAATACAGTACAGCACCTGGCCCCGA
GAATGTAGTAAACCCCGAGAATGTAGGTTTCTCATTTTTTAGCATTGTAT
CCCTAACGATAGTTCAACTTCATAAAAAGTTGTTTCAGAGCATACTGTTA
CATATTACTGATTATTTCTAGACATAAAATTTTAACTTGAATTGATTTTT
TCAGGCGAAAATCTGAATCGAAGTTGATTGGATACTACCCGAATTGAGAC
ATTTTTGAAATAAATCCTCTCTAAATCGAAATCTATTGGAATTAAGTTAT
GATGATAGGGTATTTTCTTATTTCTAATGAACTAAGGAAATGGGGAAAAT
AGTCCATTTCAGTATTTATTGTTCTAAGTTAGATATTTTGACGAAAATGT
TTGACCTACCTTTTGGGATTAGTATACCTAAAATTTGGGGGCCTTCATAA
CTCGACATAAAAAGTATGTCAAATTATGTAAAACTTGTTTGTTGTACTTT
CATAACATGAAAGTATCAACTGAGAGATGATTAATGTTGATCAATGAGCT
TTTACGACGTGTCCCAGACCCGCTGGACCCCAGCCCAATCATAAAATTTG
CCTAATTTTGGAACAATAGAATTTCCATCCCCATTGGGACTTTAGTATAA
ATTTTTGGACCCGATGTGGGAAAAAGTTCCACCGGGGCTGTGAGGCAGGG
GTGTTGTTACATTATTCACATATTTTAACACAGAATTTTCAACCTACAAA
ATAAATACAACTTTCGTGTCTCTTCTTTTCATCCTTTCTTTTACTTTTCA
TCATTTGTAGCACGATAAAATTAATATCTTAATTAATTTTTTGTCAGAGT
ATTCTTCTAAAATATGAATTTCACTTAGAGAACAATAATTTCGGATGAAT
ACTGAAATTCCGCTCTCAACAACCGAATCTTTTCACCTACATTATGGGGG
TTAAAAAGAGAAAAAATCCAATTTTAGAGCAACAAAATGCTCTTTAGAAT
ATTGTTTTGGTATAAAATATTTCTAAAATTTGCTGTTATAATTAATCAGA
TTGAAAAAATATCAACATTTTACTATTACTAGATTTAAAGCCATAAAACC
AAACCTACATTCTCGGGGTTATAACAAAAATGGGAGTCAACTTAAAGGAC
CAAAAAAAATTAGCCTATCTATCAAAAGTAATGAAACTAATCCCTGGGAA
AGGATTTTCGGAGTTCAAAATTTCGTTGAAAACATTCAATATTTTTTAAA
ATGCAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTCTCG
GGGTCAGGTGCTGTAATACAACTTTTATTTTTTGCACCTTCTAAACCATA
AAACGCTATTCAATTAGATAAGAACTGGTTTTGACTTAAAAAGAGATTAT
TCTTCAAAAAAATGAGGCGGCGTTTGACGAGGCCCATGAGTTGATTCTCA
ATGTTATTTAAATATTTTGCCAACGTATCTAATAGCCTAGATATCTAAGC
TAGTTTGTTTCAGTCACTAGGATAAATCTGATGTTGAGTTGTGACTGAAT
AAGTATTCCATGGCTAATTTAAAATCCGTAAATAATCGCTTGAGGAGTCA
CATATGAAAAAGCGCCGAAAACGCTATATAGCCATTAGCCGTTGTCCTAG
CCTTGTGAATACGGGCTTAGTTAACAAGGCTACGTATCTAAAAGAGCTAA
TTTTGGCGAGTGTGGTGGATTTTGACAAAATTCACCGAAGTTAGTTCCCA
CCAAAATTAAGAAATTCTTTGTTACACGCCAAACTAAGTTCTCGCCGATT
TTTTTTTTCAACTTTTACTACTCGCCAAAATTGGTTCCCCTAAGGTAACA
ATATTGTCTCTTTTTCGTTGATAGAATGGAATCGCGGTCGCTTTGTAGCA
GAGTACAAACAACTCTTGTTCAACCAATCTTTGGAAACAACCAAATGCGA
AGATATGGATATATCACGTAGATCAATTCACTCTACCAACTATCCGTTAC
CGTATTACGGACAAGGGAATTGTAAATTTACCTTATATTTTGGAAACAAG
AACATCGCAGGAGTCAAAGTCTTGTTTACAAAGATCGATACCAGTACACC
GTATTCTGGTGCTAAATTATGTATGGCTGAACAAAATGACTATATAAGGA
TGAAAAGTAAGTAAATAGACCTTTTCATAAATTACTCTACGAACATCACT
TGACTCGTTTTGAAATTATTGCCATGGTGATTAACTCCCAGCGGATTTTG
TTAAAACTACTTCCTATTCATAGAAAAATCATTTATTGTCTCAAGAGACA
TAATCACCATGGTAACTGTTTGAATACGAGGCAAGTGATGTTCGTGACGT
AATTTATGAAAAGTAAGTAAATTCTATACAATGGTTCGAAATTCGCCATA
TGGACAATGACCGAGTGGTTTAAGAGACTGTCCTCTTTGCACGTTTTATC
AAACTAACTTTTTACCCCAAGGAAACAATCTTTTCTACGTAAGATCATAT
CCCACAGTAATAGGACAGAGACCCGTTGGAACAACCACTAAAGTGGAGAA
GCTAAAGGCTCAAAATGAGATGAAAGCCGCTAGGAATTTGAGAAAAGTCT
CATTTGCAAGTGAGAAGTGGGAAGTCTCCAAAGTCTCCCCGCTTCCGCCG
TAGTGAGCGTAAGGCTAGCATTAGCTGCAGCGTCATAAACGACTATTTCA
ATAGGCTAATCCCGCGGCGACTTCTAACAAATATTAAAATAGTTTTTAAG
AGTATCCCATCTTTTCCGAAATCCCAAGTAACTTGATGGCAGCCATACAG
TTGACTCTCGCTAATTCGAGCTGAAACGGGAATCTTATTTTGTTCGAATT
ATGGAGAGATTCGCATTATAGAAAGTATATAAGAGGATTTCTCCATGGTG
GGGATTGAGAATAAGTTCGAATTATAGAAAGATTTGAATAATAGAAGTTC
AAATAGGTGGCAGTCTACTATTATTTTCACATCACTTTTCATAAATTTTT
TTTACATGCAACGACCCCAACTTGTTTGTCTATTTTCAGTTATATTTTCC
TAACATTCCTTTTTATATCTTATAGATGTAAAGAAAACAGGACAAATTCA
ATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCACCAGAATCTACT
GGAAAACCAAACGACTTGAAATCACCATGAATACCCCTGTCAAATGGAAC
AACCGAAACAAAGGATATATGATCAGTTACTTCCCAATCTGGAGTAAGTT
TTTCACTTTTCATTTCTCAGTCACTTGATTTCCAACGACCGTTTTCAGTG
GGCACTCGCATAGTAAAAAGTGAATCGAAGCGGGAATATCGCGAAGGTTC
ACCATACAAGCGTCCTTGGTGTTAGCGAGACACAGTGATAGCGCTATACC
AAATTTGTCCTTCCACATGGGATTAGTATGGCTATAAATTCGCAGAAGGG
TATTTTTGCCGAAAAGAGTTTACAGCCGGTAGTTTGACAGTTTGTCACAA
ACTCCACCGCTGCTATTTTTCAGTAATGCCGACTGAGGCTGTTAAGCTAG
GCGCATATATATTTCCCCTTACACTATCCCTTTATTCATGCTTTATTAAC
GGAAGATGGTATTGTCTGAAGAAATAAATAGAATCCTATTTAGACCTAAA
ACATGTTTATTTTTCATAGATTCAGCGGCCGCGGCGGATGCTGACAAAAA
TGAGGAAAGTGGTGGTCTGGCGACAGGTTGGATTGTCTTTCTGGTCATCT
TAGGAGTCGTAACATTATTCATCATATATATAAAACGAAGATTGTTTAAA
TGGAAATGTAAAAAAGCAAGATGGAATTGTTTGAACTGTTGTTATGGAGT
GAAAGATAATATGATCAAACAAGACGAGCCGGAGACTGTTTCACCAGCCT
TTAATCCACCGGGAATCGTCGTTGCTAGTAAGTACTTTTATGAGATAAAT
TTTAGGGGGATTAAATTTCGCGGATTTTGCGGATTTGGGTGTCATGCGCG
AAATTGAGTCCCAATGGAAATTTGGAAAGAAATGCTTACTCTGGCACCAC
AGAGACGCTAATAATGCGTATTTCAACAACCAACATGAATGATTTGACAG
TAAAAGGCAAAAGATCGTGAAAATATTGTCACACAATAGTGTCATCCGCG
AAAATTAATCCAATTAAAGTAAAGTACTATAGTTGAGTCTCTTTAACTCG
AACCACAATAACTCAAAAAGTTTCCTTTACTGCATCAAGTTTTATGATCC
CTTCAGTTAACAATGAAATTTCCTTAACTCGAACAAATTTGTGGCCCTCG
TGCGTGTTTGAGTTATAGAGAATCCACTATATCTATAATATCGGTCAAAA
TATATTGAGAATTTTGGTTAATTCCTCGTTTTTAGCATTTTAAAGTTCGG
GCGAGAAAATGGCTTTTGGGCCATTTGTTAGATTTAATCGAATATTTCAA
TTCGGGTGGGGTTTATAGACTTGCAGACCATATTCTGAGCCCTATTGGAC
CGTTCTTGAACTTTTGGATCCTCAGATCCCTTCTGATCTAAGTGACAGCG
CTTTCAAATCGATTGTGGCTATAAGATTTCGTGGGAATTTCCCTTTTTTC
TCAAATATCATGGCCAGTATTGTACTAAATCTTTACTTTGGAAAATACTG
AGATTCATAGTACAAATATGTCTTCTCTGATATCTTAGCTTCTACGCATT
ATACTCAGTGTACCTCAATGTGGAATATCTATTCTGAACAAGTTTCCCCA
AGTTTTTTTTTTCTTGAATTAACAGTAGCGTAGCCAAGAGGGGCACAAAA
TTTGTGTAGGAGAGCAGATTTTTATGACATTATAATTATCTTTTAATACC
ATGAATAGAGAATTATAGTGTCATAAAAATCTGCGCTCCAACACAAATTT
TGCGCCCCTTTTGGCTACGCTACAGGAATTAATGCTCCATGGCTTCACAT
TAACTTTGCATAGTCGATCCCAAAATGACGGTTTAAAATAGTTTTTGAAT
TTTTTTTATCAGGCTACACTGCTCCACAAAATGAAAACCCTTCTCCATAC
CAACCACCTACATACAAGAATTATTCATCATTTGAACAATCTCCACCTCC
TATGGGTGCAACACCACCAACTCAACATTCAGCCTCCGCCCCTTACCAAT
CACCCTCTGCACCTCCACAATCACCAACCGCCCCTGGAGATGGACCGCCC
CCGTTTCCACCCTCCTATAATGACTCGATAGGAGGAGTAGATACGGAACG
AAAGGTTGGATTTATGTAA Coding sequence (CDS) from alignment at sc0000300_pilon:210996..217014- >XLOC_003866 ID=XLOC_003866|Name=XLOC_003866|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000300_pilon:210996..217014- (Clytia hemisphaerica_ch_hm2_pilon)
TTAAGATGGAAACTTTTTGAGGTCTGGGACCAAGCACCTGATTGTAATAA
TGTTTATGTTCGAATCTGGATAGGTTAAGATGGAAACTTTTTGAGGTCTG
GGACCAAGCACCTGATTGTAATAATGTTTATGTTCGAATCTGGATAGGAT
GTCCTGGATCCTTGAAAATGTTGACACGATTTTGTACGGCGAACGATTCA
AATATCATACCACCTGATCTCTATTCAAATGATCATTGCATGAAAATTGA
ATTTAATACACTCTCTACTATGACAAATGTCCTGGATCCTTGAAAATGTT
GACACGATTTTGTACGGCGAACGATTCAAATATCATACCACCTGATCTCT
ATTCAAATGATCATTGCATGAAAATTGAATTTAATACACTCTCTACTATG
ACAAAATGGAATCGCGGTCGCTTTGTAGCAGAGTACAAACAACTCTTGTT
CAACCAATCTTTGGAAACAACCAAATGCGAAGATATGGATATATCACGTA
GATCAATTCACTCTACCAACTATCCGTTACCGTATTACGGACAAGGGAAT
TGTAAATTTACCTTATATTTTGGAAACAAGAACATCGCAGGAGTCAAAGT
CTTGTTTACAAAGATCGATACCAGTACACCGTATTCTGGTGCTAAATTAT
GTATGGCTGAACAAAATGACTATATAAGGATGAAAAAATGGAATCGCGGT
CGCTTTGTAGCAGAGTACAAACAACTCTTGTTCAACCAATCTTTGGAAAC
AACCAAATGCGAAGATATGGATATATCACGTAGATCAATTCACTCTACCA
ACTATCCGTTACCGTATTACGGACAAGGGAATTGTAAATTTACCTTATAT
TTTGGAAACAAGAACATCGCAGGAGTCAAAGTCTTGTTTACAAAGATCGA
TACCAGTACACCGTATTCTGGTGCTAAATTATGTATGGCTGAACAAAATG
ACTATATAAGGATGAAAAATGTAAAGAAAACAGGACAAATTCAATACTAT
CGGTTTTGTAGTACCCAAAAATGGCCGTTCACCAGAATCTACTGGAAAAC
CAAACGACTTGAAATCACCATGAATACCCCTGTCAAATGGAACAACCGAA
ACAAAGGATATATGATCAGTTACTTCCCAATCTGGAATGTAAAGAAAACA
GGACAAATTCAATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCAC
CAGAATCTACTGGAAAACCAAACGACTTGAAATCACCATGAATACCCCTG
TCAAATGGAACAACCGAAACAAAGGATATATGATCAGTTACTTCCCAATC
TGGAATTCAGCGGCCGCGGCGGATGCTGACAAAAATGAGGAAAGTGGTGG
TCTGGCGACAGGTTGGATTGTCTTTCTGGTCATCTTAGGAGTCGTAACAT
TATTCATCATATATATAAAACGAAGATTGTTTAAATGGAAATGTAAAAAA
GCAAGATGGAATTGTTTGAACTGTTGTTATGGAGTGAAAGATAATATGAT
CAAACAAGACGAGCCGGAGACTGTTTCACCAGCCTTTAATCCACCGGGAA
TCGTCGTTGCTAATTCAGCGGCCGCGGCGGATGCTGACAAAAATGAGGAA
AGTGGTGGTCTGGCGACAGGTTGGATTGTCTTTCTGGTCATCTTAGGAGT
CGTAACATTATTCATCATATATATAAAACGAAGATTGTTTAAATGGAAAT
GTAAAAAAGCAAGATGGAATTGTTTGAACTGTTGTTATGGAGTGAAAGAT
AATATGATCAAACAAGACGAGCCGGAGACTGTTTCACCAGCCTTTAATCC
ACCGGGAATCGTCGTTGCTAGCTACACTGCTCCACAAAATGAAAACCCTT
CTCCATACCAACCACCTACATACAAGAATTATTCATCATTTGAACAATCT
CCACCTCCTATGGGTGCAACACCACCAACTCAACATTCAGCCTCCGCCCC
TTACCAATCACCCTCTGCACCTCCACAATCACCAACCGCCCCTGGAGATG
GACCGCCCCCGTTTCCACCCTCCTATAATGACTCGATAGGAGGAGTAGAT
ACGGAACGAAAGGTTGGATTTATGTAAGCTACACTGCTCCACAAAATGAA
AACCCTTCTCCATACCAACCACCTACATACAAGAATTATTCATCATTTGA
ACAATCTCCACCTCCTATGGGTGCAACACCACCAACTCAACATTCAGCCT
CCGCCCCTTACCAATCACCCTCTGCACCTCCACAATCACCAACCGCCCCT
GGAGATGGACCGCCCCCGTTTCCACCCTCCTATAATGACTCGATAGGAGG
AGTAGATACGGAACGAAAGGTTGGATTTATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000300_pilon | genome | sc0000300_pilon:210996..217014 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 913-1167:256 |
| Aaloc | 655-909:1599 |
| Aaloc | 487-651:2193 |
| Aaloc | 205-483:3394 |
| Aaloc | 76-201:5547 |
| Aaloc | 1-72:6020 |
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