XLOC_003806 (mRNA) -

Overview
NameXLOC_003806
Unique NameXLOC_003806
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000281_pilon:418413..419361-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003806 ID=XLOC_003806|Name=XLOC_003806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=949bp|location=Sequence derived from alignment at sc0000281_pilon:418413..419361- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCATAACCCATTGAGAATCATTTCACCAAGGAACGATTTGACCAA GAAAAAAGCAATTCTGATGCAAACAGCAATTCATCAAAACGGTAAGTTCA TTTATCATCAATCCTGCAGATCCTCCATTGTGATTGATTTCAGCGTCGTG AATCGTCTTCTGCCTTTTGTCTTGGAATCTGGCGATCAAAACAGCTGCTG AGAGGCTGGTTCATTGTGTTACATCTGCGGCTCACATGCAAAGCATACAA ATCACAACGTCAAAGCCAAATTCATTTAACGTCAATTATAAAAAAATGTG TAGATGATTTTTGAGATTAACTGAATTAAACTTTCTTCCTCCGATTTAGC ACTTATCTGGGGGTTATCTGTTCTAGATTTCCGTATAACTTACATACCTA CAATCTTTGAAATTAGTTTGCGTTTGGGCATTCCCTCCCCCTAAGGCAGT GTGTTGGTTGAATAAGACCAACCTCGTCTAAAATTACGTCCAATAAAAGC AACATTTTGAGTCGGGGGCCTGGGGTATATGAGCTGAAATGTCCCACAAT TTTTGAAGATGATTGTAGGTAGAATATATTCATACCCGATTTTATTTTTA ATCTTTTCATTTTACTGCAGGTGAGACAAGTCCTGGAAGTCCAACATCAA GGATAAACAACAAAGACTTACCAGCAAAACAAATACAAAGCGATGTAACA AAAGCTATGAATGTGTCAAATAATACTTCCCAACAAAATGGAGACACAGT GCGTAGTTTTGTACCACCTATTCAATTCAACAGGCTGCCATTTTATTATT ATTGTCCTAAAGAGAGAGAAAACTTCAAAAATTTTAGCGAGTTGGTAACT CGGTTTGACTCAATCAATAGAACGAATCGACAATGTGGATATGTATTTGC ATTCCTGGCCGTAGTTGGTTTTGTTGTATTTTTGATAATAATGAAATAA

Coding sequence (CDS) from alignment at sc0000281_pilon:418413..419361-

>XLOC_003806 ID=XLOC_003806|Name=XLOC_003806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000281_pilon:418413..419361- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCATAACCCATTGAGAATCATTTCACCAAGGAACGATTTGACCAA
GAAAAAAGCAATTCTGATGCAAACAGCAATTCATCAAAACGATGTATCAT
AACCCATTGAGAATCATTTCACCAAGGAACGATTTGACCAAGAAAAAAGC
AATTCTGATGCAAACAGCAATTCATCAAAACGGTGAGACAAGTCCTGGAA
GTCCAACATCAAGGATAAACAACAAAGACTTACCAGCAAAACAAATACAA
AGCGATGTAACAAAAGCTATGAATGTGTCAAATAATACTTCCCAACAAAA
TGGAGACACAGTGCGTAGTTTTGTACCACCTATTCAATTCAACAGGCTGC
CATTTTATTATTATTGTCCTAAAGAGAGAGAAAACTTCAAAAATTTTAGC
GAGTTGGTAACTCGGTTTGACTCAATCAATAGAACGAATCGACAATGTGG
ATATGTATTTGCATTCCTGGCCGTAGTTGGTTTTGTTGTATTTTTGATAA
TAATGAAATAAGTGAGACAAGTCCTGGAAGTCCAACATCAAGGATAAACA
ACAAAGACTTACCAGCAAAACAAATACAAAGCGATGTAACAAAAGCTATG
AATGTGTCAAATAATACTTCCCAACAAAATGGAGACACAGTGCGTAGTTT
TGTACCACCTATTCAATTCAACAGGCTGCCATTTTATTATTATTGTCCTA
AAGAGAGAGAAAACTTCAAAAATTTTAGCGAGTTGGTAACTCGGTTTGAC
TCAATCAATAGAACGAATCGACAATGTGGATATGTATTTGCATTCCTGGC
CGTAGTTGGTTTTGTTGTATTTTTGATAATAATGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_003806XLOC_003806-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000281_pilongenomesc0000281_pilon:418413..419361 -
Properties
Property NameValue
Aaloc94-420:328
Aaloc1-90:950