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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:965698..967059+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003542 ID=XLOC_003542|Name=XLOC_003542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1362bp|location=Sequence derived from alignment at sc0000063_pilon:965698..967059+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAGCGAAATATTTCGCGTTTTATTAATAATCTGTTTAGTGTTACTGAT
AccattttcaattgttttttgctggggattttttttgcataagCGTTTAT
TCAAACGATACCAACTCTTTTACAATGTTCATTTCAAACGCAATGTTTCa
ttgaatcaaaaatttttgacaattgaTAAAGATTTTCCAACTCTAGCTGA
ATTAAATAATATCAAATGTGAGGCTAAAAAAGCGATGAAATGGACTgtca
aagaaatttcaaaagaatttgaagatGCTGAATCATTCGACCTTATGTTA
ACTGGAAGCACATGCGAAAGACTTAACATACCTTTGACCGTAAACTACAA
AGCGAGCCAAGTAGCGGGTGTTATGACTAATACACATGCTTTATTAACTG
ATTACGACTTTATGATTTGCGATAGAATGAATCAAGCAGATTTCGGTAGA
GGAGAAAAGTACGAAATTAGAAATGAAGATACGCCGCCTGGTTTTGCAAA
AATCAATTGCAATATGTCAAACACAATTGTTTCACCAAAAGAGATCAAAC
ACAAGATTTACACATTTATCATGAATATGCCAGAAGGCCAATTACCTATT
CTTGTCGGGGAAGAAATAAGCCCCTATCTTGTCGGGGAAGAAAAAAGCCC
CTTTCTTGTCGGGGAAGAAAAAAGCCCCTTTACTGTTGTATTAAAGGTTA
GTCGAAAAGGACCAGCAATTAGAATAAAAACACACATGCATCGTTCGAGC
TTCTTGGTAGATATAACATTTTCCATCAAAGCTAAAAAATGGCCGACAAA
TTCCGATTGGCTAACAAGAACAAGAAAATGGCCTTGTTCCGATTTTGTTG
AGAAAATTGTACAAGAAGGGTTTCATTTGGTTCCGAAATCACATCCAAAA
GATAAAAAGGAAACAACTTGGAGATTTTCATTCTCAAAAGCAGAAGTCAC
ATTACTAAACGAAATCCAACCAACCGCTAGAATATGTTTCGTTTGTCtca
aaattattgtcaaagatTTTCTCATCCCATGCAGCGACAAGCTAAGTACG
TATTATTTTAAAAGCATCTTCATGCATGTGTTAGAAAAAACAGAACCGAG
TTTTTGGCGGGAAAATGACATCGAGGATTGTTTCTATTGGCTGTTTAAAC
ACGTGAGTGAAGCtgtcaaatcaaaacaatgtcCGCATTTCTGGTTGAAT
GAAATCAATTTCTTTGAAGAACTGACAGATAGAGATGTGAACAAATTGTT
AAAACTGTTGACCAAAATCAAGCAAAATCCTTCAGCTTATATTGATGATT
CTTTTGTCAGAgacgataaaaatgaattcAACGAACATTCTCCTCTTCTA
CAAAATGTTTGA Coding sequence (CDS) from alignment at sc0000063_pilon:965698..967059+ >XLOC_003542 ID=XLOC_003542|Name=XLOC_003542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2616bp|location=Sequence derived from alignment at sc0000063_pilon:965698..967059+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAGCGAAATATTTCGCGTTTTATTAATAATCTGTTTAGTGTTACTGAT
AccattttcaattgttttttgctggggattttttttgcataagCGTTTAT
TCAAACGATACCAACTCTTTTACAATGTTCATTTCAAACGCAATGTTTCa
ttgaatcaaaaatttttgacaattgaTAAAGATTTTCCAACTCTAGCTGA
ATTAAATAATATCAAATGTGAGGCTAAAAAAGCGATGAAATGGACTgtca
aagaaatttcaaaagaatttgaagatGCTGAATCATTCGACCTTATGTTA
ACTGGAAGCACATGCGAAAGACTTAACATACCTTTGACCGTAAACTACAA
AGCGAGCCAAGTAGCGGGTGTTATGACTAATACACATGCTTTATTAACTG
ATTACGACTTTATGATTTGCGATAGAATGAATCAAGCAGATTTCGGTAGA
GGAGAAAAGTACGAAATTAGAAATGAAGATACGCCGCCTGGTTTTGCAAA
AATCAATTGCAATATGTCAAACACAATTGTTTCACCAAAAGAGATCAAAC
ACAAGATTTACACATTTATCATGAATATGCCAGAAGGCCAATTACCTATT
CTTGTCGGGACAGCGAAATATTTCGCGTTTTATTAATAATCTGTTTAGTG
TTACTGATAccattttcaattgttttttgctggggattttttttgcataa
gCGTTTATTCAAACGATACCAACTCTTTTACAATGTTCATTTCAAACGCA
ATGTTTCattgaatcaaaaatttttgacaattgaTAAAGATTTTCCAACT
CTAGCTGAATTAAATAATATCAAATGTGAGGCTAAAAAAGCGATGAAATG
GACTgtcaaagaaatttcaaaagaatttgaagatGCTGAATCATTCGACC
TTATGTTAACTGGAAGCACATGCGAAAGACTTAACATACCTTTGACCGTA
AACTACAAAGCGAGCCAAGTAGCGGGTGTTATGACTAATACACATGCTTT
ATTAACTGATTACGACTTTATGATTTGCGATAGAATGAATCAAGCAGATT
TCGGTAGAGGAGAAAAGTACGAAATTAGAAATGAAGATACGCCGCCTGGT
TTTGCAAAAATCAATTGCAATATGTCAAACACAATTGTTTCACCAAAAGA
GATCAAACACAAGATTTACACATTTATCATGAATATGCCAGAAGGCCAAT
TACCTATTCTTGTCGGGGAAGAAAAAAGCCCCTTTACTGTTGTATTAAAG
GTTAGTCGAAAAGGACCAGCAATTAGAATAAAAACACACATGCATCGTTC
GAGCTTCTTGGTAGATATAACATTTTCCATCAAAGCTAAAAAATGGCCGA
CAAATTCCGATTGGCTAACAAGAACAAGAAAATGGCCTTGTTCCGATTTT
GTTGAGAAAATTGTACAAGAAGGGTTTCATTTGGTTCCGAAATCACATCC
AAAAGATAAAAAGGAAACAACTTGGAGATTTTCATTCTCAAAAGCAGAAG
TCACATTACTAAACGAAATCCAACCAACCGCTAGAATATGTTTCGTTTGT
CtcaaaattattgtcaaagatTTTCTCATCCCATGCAGCGACAAGCTAAG
TACGTATTATTTTAAAAGCATCTTCATGCATGTGTTAGAAAAAACAGAAC
CGAGTTTTTGGCGGGAAAATGACATCGAGGATTGTTTCTATTGGCTGTTT
AAACACGTGAGTGAAGCtgtcaaatcaaaacaatgtcCGCATTTCTGGTT
GAATGAAATCAATTTCTTTGAAGAACTGACAGATAGAGATGTGAACAAAT
TGTTAAAACTGTTGACCAAAATCAAGCAAAATCCTTCAGCTTATATTGAT
GATTCTTTTGTCAGAgacgataaaaatgaattcAACGAACATTCTCCTCT
TCTACAAAATGTTTGAGGAAGAAAAAAGCCCCTTTACTGTTGTATTAAAG
GTTAGTCGAAAAGGACCAGCAATTAGAATAAAAACACACATGCATCGTTC
GAGCTTCTTGGTAGATATAACATTTTCCATCAAAGCTAAAAAATGGCCGA
CAAATTCCGATTGGCTAACAAGAACAAGAAAATGGCCTTGTTCCGATTTT
GTTGAGAAAATTGTACAAGAAGGGTTTCATTTGGTTCCGAAATCACATCC
AAAAGATAAAAAGGAAACAACTTGGAGATTTTCATTCTCAAAAGCAGAAG
TCACATTACTAAACGAAATCCAACCAACCGCTAGAATATGTTTCGTTTGT
CtcaaaattattgtcaaagatTTTCTCATCCCATGCAGCGACAAGCTAAG
TACGTATTATTTTAAAAGCATCTTCATGCATGTGTTAGAAAAAACAGAAC
CGAGTTTTTGGCGGGAAAATGACATCGAGGATTGTTTCTATTGGCTGTTT
AAACACGTGAGTGAAGCtgtcaaatcaaaacaatgtcCGCATTTCTGGTT
GAATGAAATCAATTTCTTTGAAGAACTGACAGATAGAGATGTGAACAAAT
TGTTAAAACTGTTGACCAAAATCAAGCAAAATCCTTCAGCTTATATTGAT
GATTCTTTTGTCAGAgacgataaaaatgaattcAACGAACATTCTCCTCT
TCTACAAAATGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:965698..967059 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 688-1311:739 |
| Aaloc | 610-684:664 |
| Aaloc | 1-606:1 |
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