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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:637817..640708- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003508 ID=XLOC_003508|Name=XLOC_003508|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2892bp|location=Sequence derived from alignment at sc0000063_pilon:637817..640708- (Clytia hemisphaerica_ch_hm2_pilon)
CGACTTCACCAATCTCCCCACGAAAATTACAAAATGGCGTCGTATGAAAA
TCTGTTAGATGAAGAAAGTGGGGAAAGTGATATTGATTTTGATGAAAGTG
ATTTAGAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGCTTATT
GTCACAGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTACCACT
ACAGCGAATACCAACATTAGTGTTTGTTGATGAGACAGATACTACTGTCT
GTGTCTTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAACAGAT
TTCACTGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTGGCATT
AGTCACAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAATACTG
CTACTTCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTGGCACG
TCATCACTAGAATGTCCATTCTGCTTCAAAAAATACAAATCCAAACACTG
GTACAAGTCCCATGTGGAAAAATGTGTTCAAAAATGTAAGTAGGATACAA
GGCAAAAATCTAAATAAAATTTTAAAATAATTATTTTATTTTTTTGTATG
TACAGGATGATCTATCTTCTTTCTCTTACTTTACTCAAAGAAAACAGAAA
TAATCAAGTATTCTTCTTTAGGTTTGCGTTCGTAAGAAATCGTGTTATTT
TTTCAAAATTATGTATTTTTGCATGTGCTTTATATATGGCCTAACAAATT
TTTCCTTCATCCATCCACTTGAAAACCCAACAAAATACTGCAGTCTTCAG
CAATCACGCATGTAACATACAAAGGATGACACAACCTTGAAATCTGAACT
AAATTTATGCTTCTCTTTCTATAACGGTGAAGTCGGGTAACTTGCATTGA
TGGAGGGAAACTTGCAGAGCCATCAAACATGACTGACCGTTCAAAGCAAC
AAAATTTGAATAGTTTGTTTTTAGCTCTAAATAGTTTGACAATATCAAGG
ATCTTGTTGAGTGAAAGTGAATATTTATTTACTATGAACAGGTAGTAACA
AGTCGGTTACTGTACTTATGGCTCAAATTTCAAAAAATTTGCTCAACTCT
TACGATACTGAAACAACCCTGGAAAAATTTCTGATATATTGTAAAAAGAA
CCAGCCATTCTTGTACAGAATAATTTTTCTTCATTCATTTCAGACAGAGT
CAAAATTTCATGTAGATTTGCTGGCCTGGATTTGGTTGTACTGCAGCATT
TTCCCAAATTTAGCTTTTAAATATTGAGCAAACCTTTTGAAAGTTGAGGC
TATAAGGACCCGATAGGCAACTAGATAACCCTAATGGTAGTTGGTTGAGT
TTTTCCTCTCACTTCGATTATGTTATTAACAATCCTTTTCATTTTTTTCT
TCAGATCAAGTTGAAAATGGTACTGATGCTAAAAATGGTGGATCAAACGA
AAACGTTGCAGTAAATGTTGAGAAAGAGAATGGTAAATTTGCACATACTT
TTTTCTATTATAAAGGATTCATAGTGTACTATAAAACCTTTTATAAAACA
AAATAATTTATTGTTTTCATCTATTATTCTGAGGAATTTTTTATGGGACA
CTCAACAGATAATATATATAATATATATGCGGAGACTTTGATGTGGGTTG
ACGGGTTTAAGTCATAGAATAACTATGAATAATTTTCAGATTTTGACTGA
ATTTCCCAGTTTTGAAATTGTCACAAAAATTTGTCGCTGAATTTCTGTTC
TTTTTTCTGATTTAGAATTCCTGACACACGGAAATGATCTGTTGGACAAG
GCCCTGCAATCTGTTATTGATGATCCAATATACCGAATCTGTGAACCGGG
ATCATCTACTTTTGCTCTCGCCAAAGAGATCAAGGAGTCAACGTCATCTG
TTATTAAAGCAACTTATCAGAAACACCTTCTACAAAGTATTTTCAAGATT
GTCAGAGACCCAACAACTTTCTTGAAAAATACTTCCGCTGCGCTTGGTCA
ATTTCATAATTTTTGTGTTGGAGAAACACAACTCAACAAATGGGATGAAT
TCTTGACAGACATTGGTCTTTCTGTAATTGAGAAAGTCCCCTCGAGAATT
CTTTTTAATTGTGTTTTGAATTATATCCTAAAAGAAACTATATCCTTCCA
TAAACCAAAGGAAGATGCTCCCAAAATCGACTACAATTTATCAAAAGATG
AGGAAGAATCTTTGTACTACGTGGCTGGGTATCTTGTTTTCTCGATTAGA
AAAAACACTAAAACCAAAACTGAGCAGGGAAAAACAATCCATAGATTGTT
AAATACATGGGGATCAAAGAAAGACGAAGAATTTCAAGACCTCTCTCTTA
ATGAATATACAAAGGCATGGGTTGATCAAGTGAATCGTGGAGGGCTATTT
AAAGTCAATGGCCAATTTTATGATTTGGTTGTCATTATCGAAAAAGTAGC
TCGATCCATATTAAATCTGAGTTTATTTGTAACATATTGTGGAGAAAGTA
TTCGAATAGTACTACGTGAAGCTTTTGAAAATAGTGAGGATGTGATAAAG
GCATGGAAATTACTTACTTCAGATGTTGCTAATGTTAAAATCAAAGATAA
ACTTCTACAGTTGCTATTAAATAAATGGATTAATGTTAGAGCAAACGCAT
TCATCAAAGTCTGGCTCCAACAGTATAAGTGGAATCAGTCGAAGAAAGGA
GAGGCAGTCACCGAGCAAGGAGAGCCATCTTTACGCAAATCTTTGGGAAA
AAGTAAAAAACTTGGGAAAAGACTATTGACACCAATAAAACCATCCAGCC
CAAGGAAAACTAAAAGCAGGACAGTGAGAGCAGCTGCAAAAAAACTTGCT
ACAGCAAAAGCTGTAAAACGCAAGATTGCTACCAAGACCTAA Coding sequence (CDS) from alignment at sc0000063_pilon:637817..640708- >XLOC_003508 ID=XLOC_003508|Name=XLOC_003508|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000063_pilon:637817..640708- (Clytia hemisphaerica_ch_hm2_pilon)
CGACTTCACCAATCTCCCCACGAAAATTACAAAATGGCGTCGTATGAAAA
TCTGTTAGATGAAGAAAGTGGGGAAAGTGATATTGATTTTGATGAAAGTG
ATTTAGAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGCTTATT
GTCACAGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTACCACT
ACAGCGAATACCAACATTAGTGTTTGTTGATGAGACAGATACTACTGTCT
GTGTCTTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAACAGAT
TTCACTGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTGGCATT
AGTCACAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAATACTG
CTACTTCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTGGCACG
TCATCACTAGAATGTCCATTCTGCTTCAAAAAATACAAATCCAAACACTG
GTACAAGTCCCATGTGGAAAAATGTGTTCAAAAATCGACTTCACCAATCT
CCCCACGAAAATTACAAAATGGCGTCGTATGAAAATCTGTTAGATGAAGA
AAGTGGGGAAAGTGATATTGATTTTGATGAAAGTGATTTAGAAGATTCTG
TTTTTGGTGAAGATGAATTTGTGGAGGAGCTTATTGTCACAGAAGATGAT
CTTCCTGAAAATTGTGATGAAAACTACCTACCACTACAGCGAATACCAAC
ATTAGTGTTTGTTGATGAGACAGATACTACTGTCTGTGTCTTTGGAGATG
ATGGGCCTCTTAATACAGACGAACCCAAAACAGATTTCACTGTTTCAGCT
AATGATGATTTGGATGATGAAACTTTTTTGGCATTAGTCACAAATGAGCC
TTCAGTGAGCCAACTCCAGCAGCCACAAAATACTGCTACTTCTACAACTG
CTACTTCTGCTGGTACTTCTACAACTGCTGGCACGTCATCACTAGAATGT
CCATTCTGCTTCAAAAAATACAAATCCAAACACTGGTACAAGTCCCATGT
GGAAAAATGTGTTCAAAAATATCAAGTTGAAAATGGTACTGATGCTAAAA
ATGGTGGATCAAACGAAAACGTTGCAGTAAATGTTGAGAAAGAGAATGAT
CAAGTTGAAAATGGTACTGATGCTAAAAATGGTGGATCAAACGAAAACGT
TGCAGTAAATGTTGAGAAAGAGAATGAATTCCTGACACACGGAAATGATC
TGTTGGACAAGGCCCTGCAATCTGTTATTGATGATCCAATATACCGAATC
TGTGAACCGGGATCATCTACTTTTGCTCTCGCCAAAGAGATCAAGGAGTC
AACGTCATCTGTTATTAAAGCAACTTATCAGAAACACCTTCTACAAAGTA
TTTTCAAGATTGTCAGAGACCCAACAACTTTCTTGAAAAATACTTCCGCT
GCGCTTGGTCAATTTCATAATTTTTGTGTTGGAGAAACACAACTCAACAA
ATGGGATGAATTCTTGACAGACATTGGTCTTTCTGTAATTGAGAAAGTCC
CCTCGAGAATTCTTTTTAATTGTGTTTTGAATTATATCCTAAAAGAAACT
ATATCCTTCCATAAACCAAAGGAAGATGCTCCCAAAATCGACTACAATTT
ATCAAAAGATGAGGAAGAATCTTTGTACTACGTGGCTGGGTATCTTGTTT
TCTCGATTAGAAAAAACACTAAAACCAAAACTGAGCAGGGAAAAACAATC
CATAGATTGTTAAATACATGGGGATCAAAGAAAGACGAAGAATTTCAAGA
CCTCTCTCTTAATGAATATACAAAGGCATGGGTTGATCAAGTGAATCGTG
GAGGGCTATTTAAAGTCAATGGCCAATTTTATGATTTGGTTGTCATTATC
GAAAAAGTAGCTCGATCCATATTAAATCTGAGTTTATTTGTAACATATTG
TGGAGAAAGTATTCGAATAGTACTACGTGAAGCTTTTGAAAATAGTGAGG
ATGTGATAAAGGCATGGAAATTACTTACTTCAGATGTTGCTAATGTTAAA
ATCAAAGATAAACTTCTACAGTTGCTATTAAATAAATGGATTAATGTTAG
AGCAAACGCATTCATCAAAGTCTGGCTCCAACAGTATAAGTGGAATCAGT
CGAAGAAAGGAGAGGCAGTCACCGAGCAAGGAGAGCCATCTTTACGCAAA
TCTTTGGGAAAAAGTAAAAAACTTGGGAAAAGACTATTGACACCAATAAA
ACCATCCAGCCCAAGGAAAACTAAAAGCAGGACAGTGAGAGCAGCTGCAA
AAAAACTTGCTACAGCAAAAGCTGTAAAACGCAAGATTGCTACCAAGACC
TAAAATTCCTGACACACGGAAATGATCTGTTGGACAAGGCCCTGCAATCT
GTTATTGATGATCCAATATACCGAATCTGTGAACCGGGATCATCTACTTT
TGCTCTCGCCAAAGAGATCAAGGAGTCAACGTCATCTGTTATTAAAGCAA
CTTATCAGAAACACCTTCTACAAAGTATTTTCAAGATTGTCAGAGACCCA
ACAACTTTCTTGAAAAATACTTCCGCTGCGCTTGGTCAATTTCATAATTT
TTGTGTTGGAGAAACACAACTCAACAAATGGGATGAATTCTTGACAGACA
TTGGTCTTTCTGTAATTGAGAAAGTCCCCTCGAGAATTCTTTTTAATTGT
GTTTTGAATTATATCCTAAAAGAAACTATATCCTTCCATAAACCAAAGGA
AGATGCTCCCAAAATCGACTACAATTTATCAAAAGATGAGGAAGAATCTT
TGTACTACGTGGCTGGGTATCTTGTTTTCTCGATTAGAAAAAACACTAAA
ACCAAAACTGAGCAGGGAAAAACAATCCATAGATTGTTAAATACATGGGG
ATCAAAGAAAGACGAAGAATTTCAAGACCTCTCTCTTAATGAATATACAA
AGGCATGGGTTGATCAAGTGAATCGTGGAGGGCTATTTAAAGTCAATGGC
CAATTTTATGATTTGGTTGTCATTATCGAAAAAGTAGCTCGATCCATATT
AAATCTGAGTTTATTTGTAACATATTGTGGAGAAAGTATTCGAATAGTAC
TACGTGAAGCTTTTGAAAATAGTGAGGATGTGATAAAGGCATGGAAATTA
CTTACTTCAGATGTTGCTAATGTTAAAATCAAAGATAAACTTCTACAGTT
GCTATTAAATAAATGGATTAATGTTAGAGCAAACGCATTCATCAAAGTCT
GGCTCCAACAGTATAAGTGGAATCAGTCGAAGAAAGGAGAGGCAGTCACC
GAGCAAGGAGAGCCATCTTTACGCAAATCTTTGGGAAAAAGTAAAAAACT
TGGGAAAAGACTATTGACACCAATAAAACCATCCAGCCCAAGGAAAACTA
AAAGCAGGACAGTGAGAGCAGCTGCAAAAAAACTTGCTACAGCAAAAGCT
GTAAAACGCAAGATTGCTACCAAGACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:637817..640708 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 616-1740:1126 |
| Aaloc | 538-612:1487 |
| Aaloc | 1-534:2893 |
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