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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1027870..1032069+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003503 ID=XLOC_003503|Name=XLOC_003503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4200bp|location=Sequence derived from alignment at sc0000063_pilon:1027870..1032069+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGCCTAGATCATTTTTAATTAAACGTATCGAGAAAGTACAAACTGG
ATTCTTTCCATGGCAAGATGAGATGTTGGTCCAGAGCTGTTGTCTGGAGT
ATCGGATGGGATCGGAAGATCTGGATTGTGATGAGCAAAAGGATAAAGAC
ATTGAAGTTGTTAGTGAAGATGGGATTGAAGGTAAAGATCTTAAATATTT
ATTATGTGTTCTgatttacacccctttctcaaagaccctgtgaatttttt
tccgccagtggggataaaaatgacgtactgaaacttgatggggattgata
tccctatattttcttttggctggggatttcgattctttgttttcaagtca
gaaaattcagtggggatgggaaaaatagcaacTGTCTGTGAGAAATTACC
CTTACTCATTTTACCCATCAAAAGCCGAAATTTAGTACCGGTACTAACTT
AAAATGGGAGATATACCTATTCCCAACCCACATGGTACTacaactttttt
gagattcaaaaTCAGACACCACCACATTTTCCTGTGTCACTGTCTTTCTA
CTCTCACGATTTAACAAGACTTTgtacaggttttttttttataaaaaatt
ccaaaattttgaagctttcgaaagctcttaacttttttagttttaaaatt
aacaatgttcttaacttgttcttattttgatcattttgtgaatacttttt
accatttttctaagaaattgggtgaatgggtccaaaaagccttaaaatgt
tcttaacttgttattaacattttggctagcgaagccttatgctcttatat
aatatagtttgttcttataaaaaaacatgtagaccAGTCAGGGTTGAAAA
GGAATCACAACGATAGATAAGCGTTTATTCGCAATTGTTTgcatttgcaa
aattttgttgtttacaGCTTTGAAAAACTAAGTGAGTTTATTTAAAACAA
GAACAGTGTGATATCCGGTGGAAgcgggagactggggagactgcAGCTTC
GCCagttttgagcaaatgagatttttctcgaattcctagcgaatttcaTC
TCATTCGGAGCCTTTAGCCTCTCTATCTTTACGGTTGTTTCGCCGGACCT
GATATCGACTCTTAAAATCTAGACTAATCTCCTCATAAATCAAAAGTAGG
TACGAGAACGAGGTGGGGcatgggaacgaggttgggtgATACGGAAGAGT
GTTATTAACGGGTACAAAACTTTTTCATCAGGgaaaaatattacaatttt
tttctgcgAGGAGGGTGTCTGCGATATAGCGGattcttcaattttaattt
ctCTGCTTATCTTTAGGGAGGtaaaatctaaagtctttaaaaatttgaag
aactgtactttaaagaaaaaggaaaaagaagtccaatttgtcaccacaaa
aaattaaatacctagataaaaaaagACCTGAATACACCTTTCCGACCGTA
GTCTCGCAGTTAGGCGCATGCCggttaattatccccctaaactcgatcca
atccttttttgagacctttttctattgtctgtaggtgcgaaaaaagactg
ggacggttttagggtggtaaaacggacaaaaaaaagcccgcgcggcaatt
gtcGGCTGCAGTCGAAAAGATGTGTTGAAGTTAGCGTGTCTGcctaccca
gctgacacacaacgttgtctcaacgttcatctaacgttaaatggacgttg
tgaacattaaattgacgctgaaagaacgttgtgtgccagctgggtaaacT
CCCAACTACATTGGAATGACTTCCTTCATCAATTTGTAAAATGATGAAAC
gacgaaaaagtgaaaattgtaCCAATTCAAGCAAATAATTTTCACACACT
TTGCAAAATAAGTTACTTTTTGCAAGAAAGAAATGGTACTCACATACCCA
CGCtttcgatttgaaattttaattaatttgacCCATTAAAATATGCAATC
AAAACGGCTGTATAATTAAGTAAACTATAAAGATAATTGTTAACTTTCCA
ACGAAACTGCTTAggtgtttttctatttttccaaattcaaaGGGAAAGCA
AACTATGACATTTTTGCgagaataattttttataagaacatacaaaattc
TTTAATGCTTTGGATGTTTCTTAACTATTTGAACTTCAAGTGTAAAGacg
ttcttaacatgttcttattttcaccatatttAGTGAGAGTCTGCAAAttt
ttagaatgttcttaacttgttcttattgtcttggccattgaagcctccTT
AGTTTGTTCTCACaaaaaaaCGTTTAATTAATTGCAATCAGGTCAAAAAT
GATACCATGTGAATAATTTGGCTTTTGAGCCTAATGCTGATTAAATGCTT
TTTCATACCAGAACAATTCAAAAGTCAATCTTTCGCCAAAACCTTCTAGA
CCAATGCAAGGCTCCGATATGAGgaataatcgcacgatgggttatttttt
cttatttggcacgccctcaaagagagcaattaatcgttaattgcatcctg
tagagagcaattaatcgttaatcacactctccaatgccgcgccaatgttt
acaaaattgattttaatgtttttcttacatttttttgcatcgaacgtttt
aattgcattcgaaatttattttgtgagaaagaaaatcaataaacaacaat
aaaagaaagacataaagagaagagaaaaatataaaactctcagggtaatt
tctgtaatttactttcctaactgggaaaaagtagtgaaagccattgtgcg
attagctcgtaatcacataataactcgtacaattcgaaaattgcactcgt
gatttttttgtttcgaattttcctcgtcctttcggactcggaaaattaat
aacaaaaaaatcactcgtgcaattatattcgaattgcactcgttatcatg
tgattacatatactaatcaaGAGAATATACTGTTTAATTCTGGAATAACA
TAAAAATgcatattaattgtcatgggAAATATGAAGcgtgaaaatcatga
aaaagtgaaaaatcttaaactaaaatttaccctttcttataaaaaacgtg
tataattgTAACAGAATCATTGTTTCGAATGTGACCTTCATTTTCTGCAC
GTGTTCGAAAAATCTAATTATTACtcattaaacaaaaaaaagttctcCGA
AAACAACTTTGTGCTAATTAAGACTTCCGTGTATAAGTCATACATGTgga
tttttttagttttcccttttttctaattttaagcggaattttaaacagtg
gtaaaaattttgtaaacagTGTTGAGTCACGTTGTATGTGTTGAAAGTGG
TTGAAAGTGCAAGTGCATAAATAGTAAATTTTCAGcacaaaacttcaaaa
taaactgttcctaaattcaattttatatttataacaATAGCACACAAATT
GTGTTTCCCAGTCAGGTagagaaaggaaagaaaaactaGAACATTTTTTC
AATCTAACTAAAATCTGATCATTATTTCCATTCATTTTAGAATCATCATC
CGAAAAAGATTCCATTCGAAGTCAATCGCCAACGGAAATCAAAATCCTGA
CACCATATCACAACACACCTCCACCTCCTCTCATCATTTACTCAAACAAA
GCCACCAACTCTTGCCAAGAATCAAGTGAAGATACCGGAAGTCACACATC
TGAAGATACTGACTCTCTCGTTCCGTCCCCTCTCGGCTGCAACGATCCAA
CATTCATCAATTATCACCAACAACAGCTGAAATCACCAACAGAACCGTCT
GCATTTAAACCGTATCCTCATTATTATCCAAGTATGGTCCAAAGTTTAGC
AAACAGATGCATAACACCTTGGccaaatcatcatcatcatcatccaaGTT
ATGAAGAAGCGAAAAAGCATCAATGTGAATATTGCCTTAAATGGTTCCAA
AGATCAAGTAGTTTATCAAATCACCGATTAATCCATAAGAACTCCAAATC
ATACAAATGCAACCAATGCAATATGAGTTTTCTTCGTAAGTCTGACCTCG
GTAAACACATGGTCACACACTCTGGATCAAAACCGTACCAATGTAACGTT
TGTGGTAAACGCTTTTCACAATCTTCGAATATGCTGACTCATCAAAGACG
TCATACCGGAATCCGTCCGTATTCTTGTGGTGTATGCGGGAAGGCTTTTT
ACCGGAAAGTTGATGTCCGAAGACATGCTTCGGTTCATAGAAATTATTGA
Coding sequence (CDS) from alignment at sc0000063_pilon:1027870..1032069+ >XLOC_003503 ID=XLOC_003503|Name=XLOC_003503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000063_pilon:1027870..1032069+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGCCTAGATCATTTTTAATTAAACGTATCGAGAAAGTACAAACTGG
ATTCTTTCCATGGCAAGATGAGATGTTGGTCCAGAGCTGTTGTCTGGAGT
ATCGGATGGGATCGGAAGATCTGGATTGTGATGAGCAAAAGGATAAAGAC
ATTGAAGTTGTTAGTGAAGATGGGATTGAAGATGATGCCTAGATCATTTT
TAATTAAACGTATCGAGAAAGTACAAACTGGATTCTTTCCATGGCAAGAT
GAGATGTTGGTCCAGAGCTGTTGTCTGGAGTATCGGATGGGATCGGAAGA
TCTGGATTGTGATGAGCAAAAGGATAAAGACATTGAAGTTGTTAGTGAAG
ATGGGATTGAAGAATCATCATCCGAAAAAGATTCCATTCGAAGTCAATCG
CCAACGGAAATCAAAATCCTGACACCATATCACAACACACCTCCACCTCC
TCTCATCATTTACTCAAACAAAGCCACCAACTCTTGCCAAGAATCAAGTG
AAGATACCGGAAGTCACACATCTGAAGATACTGACTCTCTCGTTCCGTCC
CCTCTCGGCTGCAACGATCCAACATTCATCAATTATCACCAACAACAGCT
GAAATCACCAACAGAACCGTCTGCATTTAAACCGTATCCTCATTATTATC
CAAGTATGGTCCAAAGTTTAGCAAACAGATGCATAACACCTTGGccaaat
catcatcatcatcatccaaGTTATGAAGAAGCGAAAAAGCATCAATGTGA
ATATTGCCTTAAATGGTTCCAAAGATCAAGTAGTTTATCAAATCACCGAT
TAATCCATAAGAACTCCAAATCATACAAATGCAACCAATGCAATATGAGT
TTTCTTCGTAAGTCTGACCTCGGTAAACACATGGTCACACACTCTGGATC
AAAACCGTACCAATGTAACGTTTGTGGTAAACGCTTTTCACAATCTTCGA
ATATGCTGACTCATCAAAGACGTCATACCGGAATCCGTCCGTATTCTTGT
GGTGTATGCGGGAAGGCTTTTTACCGGAAAGTTGATGTCCGAAGACATGC
TTCGGTTCATAGAAATTATTGAAATCATCATCCGAAAAAGATTCCATTCG
AAGTCAATCGCCAACGGAAATCAAAATCCTGACACCATATCACAACACAC
CTCCACCTCCTCTCATCATTTACTCAAACAAAGCCACCAACTCTTGCCAA
GAATCAAGTGAAGATACCGGAAGTCACACATCTGAAGATACTGACTCTCT
CGTTCCGTCCCCTCTCGGCTGCAACGATCCAACATTCATCAATTATCACC
AACAACAGCTGAAATCACCAACAGAACCGTCTGCATTTAAACCGTATCCT
CATTATTATCCAAGTATGGTCCAAAGTTTAGCAAACAGATGCATAACACC
TTGGccaaatcatcatcatcatcatccaaGTTATGAAGAAGCGAAAAAGC
ATCAATGTGAATATTGCCTTAAATGGTTCCAAAGATCAAGTAGTTTATCA
AATCACCGATTAATCCATAAGAACTCCAAATCATACAAATGCAACCAATG
CAATATGAGTTTTCTTCGTAAGTCTGACCTCGGTAAACACATGGTCACAC
ACTCTGGATCAAAACCGTACCAATGTAACGTTTGTGGTAAACGCTTTTCA
CAATCTTCGAATATGCTGACTCATCAAAGACGTCATACCGGAATCCGTCC
GTATTCTTGTGGTGTATGCGGGAAGGCTTTTTACCGGAAAGTTGATGTCC
GAAGACATGCTTCGGTTCATAGAAATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1027870..1032069 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 184-891:3493 |
| Aaloc | 1-180:1 |
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