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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:955165..957540+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003500 ID=XLOC_003500|Name=XLOC_003500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2376bp|location=Sequence derived from alignment at sc0000063_pilon:955165..957540+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGCCCTAACCAACACATCAGTAGATCCTAAAGGAGCATTCCAAAG
AAACAAAGCTAAACATGGAAATCTCATTGCTAAAGGTATATGGTAAAAAT
ttgttgtaaaattgtaaaatcttCCATAGTCAATGATCTATTAACACATA
ATCTATCAAACAAATCTTTTAGGAGGACAATATCCACCGGAGGCTGGCCG
TTATCATTTGCACATCGCATTGGCGTGCCCATGGGCGGATGGCGTTTTGG
CTATGTTGTATTTGAAAGGGTAAGGTTTGATTATCTTCACTTCTAATTTC
AATAACATCAAAAATTCACCATCACTAACTTCAGtgatatcaaggtgaaa
aaacgcaatgtttttaaaaaatatggatttttcacttacttttaaattta
gttttaattaCCCACGCCAAAATCTGGAAAGTAGAGGGGAGAGGGGAGAA
AAATATATTGTGAAATTTCGACTGTTATGCCTTAAATTAGTCCTTTTTCA
GACTGATTTTGCCCATAGAaattggagcttgattttttgtgtatgggtct
gttttcaacgactagtttactagtctattgAAAGTGTGAAACCTGATGTT
TATAAGGaataataactttttatttgagaaaagTGAGGGGTTCATTGTCC
CCCAGGCTTCCGGCCACCCTCCCTCTTGATGTGGACCCCAGAAAAGAAAC
TGTCAAAAATTACtacaaatcttgattttttagcTTAGATCACGTGATCT
CGCACTCTATTGTTCATCCCACGTGGGGTAAAACGAAGCCGGATGATGAC
GAAGATACCCATTATGGATGGATGTATAAAAAACCAGGTTTGTTTAGAGG
TCTTATTTAGGCCCGGCGAACGGCAAATTTCGCTGCAataaaagtcataa
tatttgtgaaaaaagggaaattcccatgAAATCTtactctaaattaggtt
ggaagggagttttaacattagacttaataCTAAGGGTCCAAAAATTCAAG
AATGGTCCACTAGGGCTCAGAATACGACCttgaagtctataaacccctcc
cgaattgaaatattcggaTACATTTATCAAtcagcccaaaagcgactttc
tcgcccgaactttaaattgctaaaaacgaggaattaaccaaaattctcaa
tatattttgaccaaaattgtGGTCTAGAAATTCGGTTTGCCGCCTTAAGT
ACATATTCGAGCTAGTCAATGCGCTGACCTTGCTAAGAATTCACCGGCCT
AGAATAAAGAATTCGCCGGAATTTTCATTTGCCAGCCTTCCAGAAACAAT
GACGctatttctattgttctctgcgtacaaggggagTGGTGTCGAGTATT
AACAGTTCATTGGTgaggaatacaccttttcacGGTCAGGCGCTTGCCGC
TTTactatttaattatccccctaaagtcgatccaatccttttttacacct
ttttctattgtctgtaAGTGTAAAAAAGTCTTGGACGGTTTTAGGGTAGC
AAAACGGACAAAGAAATGCCCGCgtggcaattggtggctacggtcgaaaa
ggtgtattaaaatgtctagatttgttgaaaaattgagcTATCTGACTTGc
acttttttttaatcatgCTCTTATTCCTCATCTTTACAGGTGATGATCCA
TTGCCCAATCCACTTGGTCATGGTTCAAACGAATGTGACGATGCTTTGAT
TCCTGATACATTTACAAACGCTAAATCTGTCCGTGAAGTTTACAACCAAT
GTGGTGACCATTCAGGCCCCTTCTCCACACCCCTTCTGTATGATAAGGAA
ACCAAATCGATTGTTTGCAATGAAAGTATGCTTATCTTAAGAATGCTGAA
TGACAAATTCAATGAGTATGCAAAACACCCTGAGATTGATTTATATCCGT
CAGAGCTTGACGAAGAATTGCAGAATCTAAATGAAACTTTGGTTTATCCG
AAAATCAATAATGGTGTTTACAGATGCGGCTTTGCGAGGAGTCAAGAAGC
ATACGCTCAAGCAGTCACGGAGCTTTCCGAAGCACTCGAAATCTTAGAAG
ATCGCTTAAGCAAACAACGGTATTTGGGTAGTTCGACTAAACTTACCTGG
CTTGATTTGAGGCTTTTTATGACTCTGGTGCGGTTCGATCCTGTTTATGT
GACATACTTCAAGACCAACAAGAAACGCCTGGTTGATTATCCGAATCTTC
TTGGCTTTACCAGAGATGTCTACTCCAATGAGAATATCAAACGTGTGATC
AATTTCAAGCATAttaaaactcattattttaCTTCTCACCCTGTTTTCAA
CACATATGGTATTATACCGGCTTACGACGGCCCGGATTTGGAATTGCAAA
GTGGCCGTGAACAAATGGGACATTGA Coding sequence (CDS) from alignment at sc0000063_pilon:955165..957540+ >XLOC_003500 ID=XLOC_003500|Name=XLOC_003500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2046bp|location=Sequence derived from alignment at sc0000063_pilon:955165..957540+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGCCCTAACCAACACATCAGTAGATCCTAAAGGAGCATTCCAAAG
AAACAAAGCTAAACATGGAAATCTCATTGCTAAAGATGTCTGCCCTAACC
AACACATCAGTAGATCCTAAAGGAGCATTCCAAAGAAACAAAGCTAAACA
TGGAAATCTCATTGCTAAAGGAGGACAATATCCACCGGAGGCTGGCCGTT
ATCATTTGCACATCGCATTGGCGTGCCCATGGGCGGATGGCGTTTTGGCT
ATGTTGTATTTGAAAGGGAGGACAATATCCACCGGAGGCTGGCCGTTATC
ATTTGCACATCGCATTGGCGTGCCCATGGGCGGATGGCGTTTTGGCTATG
TTGTATTTGAAAGGcTTAGATCACGTGATCTCGCACTCTATTGTTCATCC
CACGTGGGGTAAAACGAAGCCGGATGATGACGAAGATACCCATTATGGAT
GGATGTATAAAAAACCAGcTTAGATCACGTGATCTCGCACTCTATTGTTC
ATCCCACGTGGGGTAAAACGAAGCCGGATGATGACGAAGATACCCATTAT
GGATGGATGTATAAAAAACCAGGTGATGATCCATTGCCCAATCCACTTGG
TCATGGTTCAAACGAATGTGACGATGCTTTGATTCCTGATACATTTACAA
ACGCTAAATCTGTCCGTGAAGTTTACAACCAATGTGGTGACCATTCAGGC
CCCTTCTCCACACCCCTTCTGTATGATAAGGAAACCAAATCGATTGTTTG
CAATGAAAGTATGCTTATCTTAAGAATGCTGAATGACAAATTCAATGAGT
ATGCAAAACACCCTGAGATTGATTTATATCCGTCAGAGCTTGACGAAGAA
TTGCAGAATCTAAATGAAACTTTGGTTTATCCGAAAATCAATAATGGTGT
TTACAGATGCGGCTTTGCGAGGAGTCAAGAAGCATACGCTCAAGCAGTCA
CGGAGCTTTCCGAAGCACTCGAAATCTTAGAAGATCGCTTAAGCAAACAA
CGGTATTTGGGTAGTTCGACTAAACTTACCTGGCTTGATTTGAGGCTTTT
TATGACTCTGGTGCGGTTCGATCCTGTTTATGTGACATACTTCAAGACCA
ACAAGAAACGCCTGGTTGATTATCCGAATCTTCTTGGCTTTACCAGAGAT
GTCTACTCCAATGAGAATATCAAACGTGTGATCAATTTCAAGCATAttaa
aactcattattttaCTTCTCACCCTGTTTTCAACACATATGGTATTATAC
CGGCTTACGACGGCCCGGATTTGGAATTGCAAAGTGGCCGTGAACAAATG
GGACATTGAGTGATGATCCATTGCCCAATCCACTTGGTCATGGTTCAAAC
GAATGTGACGATGCTTTGATTCCTGATACATTTACAAACGCTAAATCTGT
CCGTGAAGTTTACAACCAATGTGGTGACCATTCAGGCCCCTTCTCCACAC
CCCTTCTGTATGATAAGGAAACCAAATCGATTGTTTGCAATGAAAGTATG
CTTATCTTAAGAATGCTGAATGACAAATTCAATGAGTATGCAAAACACCC
TGAGATTGATTTATATCCGTCAGAGCTTGACGAAGAATTGCAGAATCTAA
ATGAAACTTTGGTTTATCCGAAAATCAATAATGGTGTTTACAGATGCGGC
TTTGCGAGGAGTCAAGAAGCATACGCTCAAGCAGTCACGGAGCTTTCCGA
AGCACTCGAAATCTTAGAAGATCGCTTAAGCAAACAACGGTATTTGGGTA
GTTCGACTAAACTTACCTGGCTTGATTTGAGGCTTTTTATGACTCTGGTG
CGGTTCGATCCTGTTTATGTGACATACTTCAAGACCAACAAGAAACGCCT
GGTTGATTATCCGAATCTTCTTGGCTTTACCAGAGATGTCTACTCCAATG
AGAATATCAAACGTGTGATCAATTTCAAGCATAttaaaactcattatttt
aCTTCTCACCCTGTTTTCAACACATATGGTATTATACCGGCTTACGACGG
CCCGGATTTGGAATTGCAAAGTGGCCGTGAACAAATGGGACATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:955165..957540 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-1023:1642 |
| Aaloc | 184-285:735 |
| Aaloc | 88-180:175 |
| Aaloc | 1-84:1 |
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