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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:630524..635043+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003494 ID=XLOC_003494|Name=XLOC_003494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4520bp|location=Sequence derived from alignment at sc0000063_pilon:630524..635043+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATATGGATGAAAAAGAACATTTggagaatttgaaaaacttaTGTCG
TCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACAAGGAGGTGAAGC
TTGCTTCCTCATTCAGTGGTCAAATTCAATCTTTGTTAAACTTTAAAGTA
ACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAGCAAAAGA
ATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCGTGTACAA
TGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACACACAGGCA
TCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTACTATTGA
CATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTCGTTTATG
AGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTCATCTATA
GAtgagaatttgaaaaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATC
TATAAAAGGCTACAAGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAA
TTCAATCTTTGTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCAC
CCAAAGAAACTTTGCAGCTCTTGTGTGAGAAAGCTCAGATACATTAATGT
TACAACCCCCATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATA
AAAGCAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAAC
TTTAAAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGAT
AAAAAAGCAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTA
AACTTTAAAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAA
GATAGCAAAAGAATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAA
CATCGTGTACAATGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGAC
GACACACAGGCATCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGA
CATTACTATTGACATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGA
CTTTCGTTTATGAGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAA
CTGTCATCTATAGATGATGCTAAACAACTCTTTGGTCACATTTTAAATGC
CAAAGTATGTGAAGGGAATGTTGACACTGATCTCCCGAAGTTGACCACCA
AAAGAAAGGAGAATATGAATGAAAGTAAAACATCAACTCTTCTAGAGACT
CCAGAGCTGAAGCAATTCAATAAGGTCCGTACCACAATTCGCAATCAGAA
CTGCTCCCTCTTAACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGA
GTCGGCATGATCTTCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAA
TCAAAAAAGCCACATGCAGCAATGACAAAAGCTGAACTAACTGATAAACT
AACCaaagagttgaagcggaagcagaagaaacttgaaaagaaaattgaaa
aacttgttaaaaaggaagGTGTTGTGCTTCACGAAGAGGACAATGAGCCT
CTTGTACGGGCTGTTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTC
TGCAATGGCTTTGCTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAA
AACCCACATCAATGAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGC
ATTTATTTACGAAGTTCAGGTAACTATGTCTATTCATGTCTACAACTGTT
AGTTACTAAATGAAAATCTGGTCAAAGCTATCATGACCTTTTTTATTCCA
GTGAAAATgatgtattttcttttttttgttggtAATAACTGCTTATGATT
CAATCTACtacttttatcatttaattATCAACCTTTATTTACATTCAAAA
TTATACTACAAAGAATTTTATGCAGAGTTTTTGGTTACAATTATTGGAGG
AAATAACATCAATATATAATAAGTGATTACTTTTATCCTTCTGTGTCTGC
TTGAGCCTTCTGGTTATCATGTTTGATTTTAGATATAAATAGAATATAGT
TTTATCGAACGATAAGctcaaaagataaatttttcaaaccaaTTTTGCTA
ATTTCATGGAAATCAGTGTGAATATTAAAGTCAGTTtgttgtaaaaaaag
aaatgtataaaaagaaaaaaaatatattgattaaATGAACAAAAGGACTG
AGTCGTCAGAGAGGTATaaccataattttttttactgttgAAAACATGTT
TTACATAGGAAAATGTCTTTCATTACTTTCAGGTACCTACGAACAAATAC
GTCAAAGTGGTTTCCTCACGCTACCACACAAATCCACCTTACAACAATAC
ACTGGTTTCACTGACATCATGACATCATTCAATCCAGATATTCTCAAAAA
GTATGCGGATGAGATGAAACTCTCTAAGTTACCAGAATTTATGAGATGTT
GCTCGTTGATGTTCGACgagatgaaaataaaatcaggACTGGTCTTCAGC
AAGGCCAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGACCTCAATGA
CGAGATTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAAATCTCGAA
CAATGGCATCACATGGTCTCGTATTAATGCTACGAGGCTTTTTCAAGCAC
TACAATCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCAAGTGAACA
ACTTTACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCT
TTAATGTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATAGAAGCTTC
TTTGAGATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTCGATGGTGT
TGTCTACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGTTTATTTCA
TCAGTGACCCACCACATTTGATGAAAACACTCCGAAATAATCTTGAAAAC
TCTGGTGGAAATAAAGCAACACGTACCCTTATGGTAAGTCTAAGGCCTCC
ACACCAacatgatgaatttttttgggGGAAAACATGGAAATTCAATGATG
GGTTGATGTTGATTTTATAATCTGGGTCGAGCCTTGGATTGTTTCACAGT
TATTCTGGTTTCCAGCAAATAAGTCCACATATTTCTTTAATAttctaaaa
ttcttttttcagaaaaatggtCAGCATCTATCTTGGAACCAAATCCGGAT
TCTCTATGAAAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGAGGA
AACTTCACAAACTCACGAATGATCATGTTAATTTAGGACCGAGAACTAGA
ATGCGTGTAAATTTAGCGGTCCAGGtaagtaatttttcaattttttcaaa
tcttttttatgtaattcatatataatttttGCTACTTCTAAAGCATATTA
TAATCAATGTTTTGCACAATTTTTACGTCTGAATAATTTTTGCTAAGGTT
TTTTCTATATTCAGACTTTCAGGTTCCTAGTATGGCTGCTttattaaaaa
gttaagaaagttcaaaaaacacgttttcgtttttttcaacATTGCTTACT
TTTTTCCTTTGGCCAAACTGAACCAAATTActgtagtttgttcttttacT
GGCCAAGCcactaaaatttttattttgtaattctttttggggtaaatttt
ttctatttgtttttttacttttaggttCTCAGTAAGTCTGTCGTTGATGC
TCTTATCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAA
AGTACTGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGACTGCT
TggttaaagaagaaaaaaccaaaTTTGAAACCTTTCGAGAAACCGAAGCC
AGTGGAACAGCTTAAACCCGGTGAAGAgccagaaaaaagattttgggtaA
GTGTATTGACTCACTTCTTGACATACCAGCTTTTAAGGCATCGATGACTA
TCTCATTTCCAAAATGAGTGTATTGGTGTGTGAAACAATAAGCGACATCG
TTTGTGTTTGGATTTCCCTTATCAAATACTCtttaaaactcaatttgaat
ACTCCTGGTCTGATGTCTACCTGGTGGATTCTTAGGGTAgggttttttgg
aaagtttgatACTGTATGTTACTGGTTGTAATAGACTTTGCGAGTTATgc
gtttcttttgttttgatagtatTACCAAATTTATCCATTTGGCATTTTTT
AGTAAGCTCTTTCAGTAACAGGGTTCGTAGTCTTTGGCAGAGGAAGTCTT
TTTCCTTACAAGGACTATTTacagaagtcataaaaaaatacaGTGTTTTG
ATTGCCGCTAAGATTCAccaatattttattgtttattttagtGGCTTGAA
CACAAATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTT
GAATATGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAA
TACAAGGATTGCGTATCACA Coding sequence (CDS) from alignment at sc0000063_pilon:630524..635043+ >XLOC_003494 ID=XLOC_003494|Name=XLOC_003494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4908bp|location=Sequence derived from alignment at sc0000063_pilon:630524..635043+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATATGGATGAAAAAGAACATTTggagaatttgaaaaacttaTGTCG
TCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACAAGGAGATGAATA
TGGATGAAAAAGAACATTTggagaatttgaaaaacttaTGTCGTCTTTGT
CGGATGAAGGCAGTATCTATAAAAGGCTACAAGGAGGTGAAGCTTGCTTC
CTCATTCAGTGGTCAAATTCAATCTTTGTTTGGGTACGACTTGAAAGATG
ACAAAGATGGAGTTCACCCAAAGAAACTTTGCAGCTCTTGTGTGAGAAAG
CTCAGATACATTAATGTTACAACCCCCATGCACGAGAAGCAAGAGATTGC
CGAATTTTCAGTCCATAAAAGCAAGGAAGACTGTCCATTATGCTCAAAAA
CAATGACTGTGTTAAACTTTAAAGTAACACCTTTGAAATGCTTAACTGTT
GCCTCCATTATCAAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATTCA
ATCTTTGTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCCAA
AGAAACTTTGCAGCTCTTGTGTGAGAAAGCTCAGATACATTAATGTTACA
ACCCCCATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAAAG
CAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTTTA
AAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAGCA
AAAGAATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCGTG
TACAATGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACACAC
AGGCATCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTACT
ATTGACATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTCGT
TTATGAGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTCAT
CTATAGATGATGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAGTA
TGTGAAGGGAATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGAAA
GGAGAATATGAATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGAGC
TGAAGCAATTCAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCTCC
CTCTTAACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGGCA
TGATCTTCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAAAA
AGCCACATGCAGCAATGACAAAAGCTGAACTAACTGATAAACTAACCaaa
gagttgaagcggaagcagaagaaacttgaaaagaaaattgaaaaacttgt
taaaaaggaagGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGTAC
GGGCTGTTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAATG
GCTTTGCTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCCAC
ATCAATGAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTATT
TACGAAGTTCAGATAGCAAAAGAATTGGGACTGACAGAGTTGGAAACAAG
GTCGACCGCAACATCGTGTACAATGTTACGGCCCGTGAAATATGATAGAA
AACCTTCTGACGACACACAGGCATCACAAGAAGAGAATCCAGTTAACCCG
TTTTACGTTGACATTACTATTGACATCAAAGCAGACCCTGCAGGAGGATT
TTTGTTTCAGACTTTCGTTTATGAGAAAACCAAAAGTTTTGGTGATGGAT
TACCAACAAAACTGTCATCTATAGATGATGCTAAACAACTCTTTGGTCAC
ATTTTAAATGCCAAAGTATGTGAAGGGAATGTTGACACTGATCTCCCGAA
GTTGACCACCAAAAGAAAGGAGAATATGAATGAAAGTAAAACATCAACTC
TTCTAGAGACTCCAGAGCTGAAGCAATTCAATAAGGTCCGTACCACAATT
CGCAATCAGAACTGCTCCCTCTTAACCAAAAACGAAAAGCGATGCAACGA
ATGCCAGAAGAGTCGGCATGATCTTCAGAAGATGGAAAGACGACAATCGA
TCGAAGCCAAATCAAAAAAGCCACATGCAGCAATGACAAAAGCTGAACTA
ACTGATAAACTAACCaaagagttgaagcggaagcagaagaaacttgaaaa
gaaaattgaaaaacttgttaaaaaggaagGTGTTGTGCTTCACGAAGAGG
ACAATGAGCCTCTTGTACGGGCTGTTGTCAAAAACGAGGAATGTCCTTTT
GATAAGGGGTCTGCAATGGCTTTGCTATGGCAGCAGCAGAAAACAGCATC
CCACTTCAAAAAACCCACATCAATGAGGTGGCACCCTGTAATCATCCGAT
GGGCTCTGAGCATTTATTTACGAAGTTCAGGTACCTACGAACAAATACGT
CAAAGTGGTTTCCTCACGCTACCACACAAATCCACCTTACAACAATACAC
TGGTTTCACTGACATCATGACATCATTCAATCCAGATATTCTCAAAAAGT
ATGCGGATGAGATGAAACTCTCTAAGTTACCAGAATTTATGAGATGTTGC
TCGTTGATGTTCGACgagatgaaaataaaatcaggACTGGTCTTCAGCAA
GGCCAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGACCTCAATGACG
AGATTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAAATCTCGAACA
ATGGCATCACATGGTCTCGTATTAATGCTACGAGGCTTTTTCAAGCACTA
CAATCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCAAGTGAACAAC
TTTACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCTTT
AATGTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATAGAAGCTTCTT
TGAGATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTCGATGGTGTTG
TCTACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGTTTATTTCATC
AGTGACCCACCACATTTGATGAAAACACTCCGAAATAATCTTGAAAACTC
TGGTGGAAATAAAGCAACACGTACCCTTATGGTACCTACGAACAAATACG
TCAAAGTGGTTTCCTCACGCTACCACACAAATCCACCTTACAACAATACA
CTGGTTTCACTGACATCATGACATCATTCAATCCAGATATTCTCAAAAAG
TATGCGGATGAGATGAAACTCTCTAAGTTACCAGAATTTATGAGATGTTG
CTCGTTGATGTTCGACgagatgaaaataaaatcaggACTGGTCTTCAGCA
AGGCCAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGACCTCAATGAC
GAGATTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAAATCTCGAAC
AATGGCATCACATGGTCTCGTATTAATGCTACGAGGCTTTTTCAAGCACT
ACAATCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCAAGTGAACAA
CTTTACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCTT
TAATGTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATAGAAGCTTCT
TTGAGATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTCGATGGTGTT
GTCTACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGTTTATTTCAT
CAGTGACCCACCACATTTGATGAAAACACTCCGAAATAATCTTGAAAACT
CTGGTGGAAATAAAGCAACACGTACCCTTATGaaaaatggtCAGCATCTA
TCTTGGAACCAAATCCGGATTCTCTATGAAAAAGACTTGAATATGAATGC
TGCTCACCCTGGATTGAGGAAACTTCACAAACTCACGAATGATCATGTTA
ATTTAGGACCGAGAACTAGAATGCGTGTAAATTTAGCGGTCCAGaaaaat
ggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCTATGAAAAAGACTT
GAATATGAATGCTGCTCACCCTGGATTGAGGAAACTTCACAAACTCACGA
ATGATCATGTTAATTTAGGACCGAGAACTAGAATGCGTGTAAATTTAGCG
GTCCAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTATCAAGCAAGGCTA
CGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTACTGTGACAAGTTTT
TTGACATCATGAACATACAAAATAAGACTGCTTggttaaagaagaaaaaa
ccaaaTTTGAAACCTTTCGAGAAACCGAAGCCAGTGGAACAGCTTAAACC
CGGTGAAGAgccagaaaaaagattttgggttCTCAGTAAGTCTGTCGTTG
ATGCTCTTATCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTC
ATAAAGTACTGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGAC
TGCTTggttaaagaagaaaaaaccaaaTTTGAAACCTTTCGAGAAACCGA
AGCCAGTGGAACAGCTTAAACCCGGTGAAGAgccagaaaaaagattttgg
tGGCTTGAACACAAATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGAC
GGGTGCTTTGAATATGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCT
TCCAAACAATACAAGGATTGCGTATCACAtGGCTTGAACACAAATTCCTG
AAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATATGCCTCC
AGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAAGGATTGC
GTATCACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:630524..635043 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2326-2454:4392 |
| Aaloc | 2104-2325:3725 |
| Aaloc | 1942-2103:3213 |
| Aaloc | 1243-1941:2335 |
| Aaloc | 373-1239:902 |
| Aaloc | 94-372:520 |
| Aaloc | 1-93:1 |
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