XLOC_003322 (mRNA) -

Overview
NameXLOC_003322
Unique NameXLOC_003322
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000259_pilon:240440..241297+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003322 ID=XLOC_003322|Name=XLOC_003322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=858bp|location=Sequence derived from alignment at sc0000259_pilon:240440..241297+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagatatttgtttttataaatctcACAATTCTAACCTTGTGCTTGGC TGATCCTTCGGGTTCGAGCAGTTCGAGCTCTTCAAATTCATCCTGTAGTT CTTCTGATGAGGAACCACCACCACCTAAGAAGAGAGCAAGAACAATGCCG TTGGTGGACGATGAATCGGTCTTGTCAGACAACCAACACGAGCCACAACA AGACACAAGAACAACTGATGCTATAACCCATTCATCTTCATACCAACGTT TCACTAAAGAGGCCCTACAAGACGCCTGCAAATTACGAAACATTCAAACT TCAGGGTCACGCCCTACATTAATTCTACGGCTTGAAGCGTTTGATCGCGA GCAAACCATCTTAAATTCGAACAGACAGAGACAGCAAGAAGAGAATTTAC ATCATGAAACCCCAACCGCCTCTGCCACTCGTCGTCGTTCGAGGAGAAAC CGAAGAAAAACTCGTCGTACGAGAAGACACCGCAGGAGGagagaaaataa taacaataatccTGCACAACTTCGCCGCCATTTTGTACGCAGTGCTGAGG CTTCCCCCTATACTTTCGAGGCTAATCTACACCCTCCACCGTTTTCAAAC CGTCAAAACATTGCCATTCCTGGAATTCCACAGCAGCAGCTAGATAAAAT TCAGAAGGGTGAGTTTGTTAACTTTAATTTGCTTCTTCCCCGGCCAGCTT CTGCCTCTAATTCAACTCAGTCATTTACCCTTTCTGTTTCGGAGGATGCT CCTGGGAGTCTTTCTATTTCTGGGACTGGGGACTCCATGGACTGTCAAAA GGTAAAGTTAAAGTTTCAAACCCACAATTGTGGTTTCTTGCTTGGTCGTT GTTTTTTG

Coding sequence (CDS) from alignment at sc0000259_pilon:240440..241297+

>XLOC_003322 ID=XLOC_003322|Name=XLOC_003322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000259_pilon:240440..241297+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagatatttgtttttataaatctcACAATTCTAACCTTGTGCTTGGC
TGATCCTTCGGGTTCGAGCAGTTCGAGCTCTTCAAATTCATCCTGTAGTT
CTTCTGATGAGGAACCACCACCACCTAAGAAGAGAGCAAGAACAATGCCG
TTGGTGGACGATGAATCGGTCTTGTCAGACAACCAACACGAGCCACAACA
AGACACAAGAACAACTGATGCTATAACCCATTCATCTTCATACCAACGTT
TCACTAAAGAGGCCCTACAAGACGCCTGCAAATTACGAAACATTCAAACT
TCAGGGTCACGCCCTACATTAATTCTACGGCTTGAAGCGTTTGATCGCGA
GCAAACCATCTTAAATTCGAACAGACAGAGACAGCAAGAAGAGAATTTAC
ATCATGAAACCCCAACCGCCTCTGCCACTCGTCGTCGTTCGAGGAGAAAC
CGAAGAAAAACTCGTCGTACGAGAAGACACCGCAGGAGGagagaaaataa
taacaataatccTGCACAACTTCGCCGCCATTTTGTACGCAGTGCTGAGG
CTTCCCCCTATACTTTCGAGGCTAATCTACACCCTCCACCGTTTTCAAAC
CGTCAAAACATTGCCATTCCTGGAATTCCACAGCAGCAGCTAGATAAAAT
TCAGAAGGGTGAGTTTGTTAACTTTAATTTGCTTCTTCCCCGGCCAGCTT
CTGCCTCTAATTCAACTCAGTCATTTACCCTTTCTGTTTCGGAGGATGCT
CCTGGGAGTCTTTCTATTTCTGGGACTGGGGACTCCATGGACTGTCAAAA
GGTAAAGTTAAAGTTTCAAACCCACAATTGTGGTTTCTTGCTTGGTCGTT
GTTTTTTGatgaagatatttgtttttataaatctcACAATTCTAACCTTG
TGCTTGGCTGATCCTTCGGGTTCGAGCAGTTCGAGCTCTTCAAATTCATC
CTGTAGTTCTTCTGATGAGGAACCACCACCACCTAAGAAGAGAGCAAGAA
CAATGCCGTTGGTGGACGATGAATCGGTCTTGTCAGACAACCAACACGAG
CCACAACAAGACACAAGAACAACTGATGCTATAACCCATTCATCTTCATA
CCAACGTTTCACTAAAGAGGCCCTACAAGACGCCTGCAAATTACGAAACA
TTCAAACTTCAGGGTCACGCCCTACATTAATTCTACGGCTTGAAGCGTTT
GATCGCGAGCAAACCATCTTAAATTCGAACAGACAGAGACAGCAAGAAGA
GAATTTACATCATGAAACCCCAACCGCCTCTGCCACTCGTCGTCGTTCGA
GGAGAAACCGAAGAAAAACTCGTCGTACGAGAAGACACCGCAGGAGGaga
gaaaataataacaataatccTGCACAACTTCGCCGCCATTTTGTACGCAG
TGCTGAGGCTTCCCCCTATACTTTCGAGGCTAATCTACACCCTCCACCGT
TTTCAAACCGTCAAAACATTGCCATTCCTGGAATTCCACAGCAGCAGCTA
GATAAAATTCAGAAGGGTGAGTTTGTTAACTTTAATTTGCTTCTTCCCCG
GCCAGCTTCTGCCTCTAATTCAACTCAGTCATTTACCCTTTCTGTTTCGG
AGGATGCTCCTGGGAGTCTTTCTATTTCTGGGACTGGGGACTCCATGGAC
TGTCAAAAGGTAAAGTTAAAGTTTCAAACCCACAATTGTGGTTTCTTGCT
TGGTCGTTGTTTTTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_003322XLOC_003322-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259_pilongenomesc0000259_pilon:240440..241297 +
Properties
Property NameValue
Aaloc499-861:496
Aaloc1-495:1