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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000259_pilon:126889..132520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003282 ID=XLOC_003282|Name=XLOC_003282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5632bp|location=Sequence derived from alignment at sc0000259_pilon:126889..132520- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTCGCAGTACGCTTGACCGTATCAATCATAACTGTGGTTACACT
TGCTATGTATTTAGTATGTACGACCACGGATTATTGGCATGCAACCGAAT
ACCATAACACGCTGCATCGCCAGTCGGTGATTCAAGGGACCCATTCGGGA
ATATGGAATGGTTGCTATGTTAGAGACCACAAGGAATTATGTGGACATAT
CCATCGAGAGGGTCGTAAGTTGTATATACTTGTTCTCTAAGTTCCCGAAT
GGTAGGAGGTCCAAACAAAAAGGGGTTCCTCCAAAAACTCCCCCAAATAA
GGTAGTTTTAAGTTAAAACCAGGTTATTTTCAGCTTGTGATAGCTGAAAA
TATTTTCAAAAATAAATAACGAGGAGGCCCTAATAAGAACGAGGACAGTG
TTTATTCGATACCTTAGTGTAGCCTTTTCTTCATCTACAATAATTCTCGA
TGTTAGTCGCAGCCGTATAATATCACATCAGTTAATTGCACGATGCAAGA
AAACGACTTCTTGAATATTTTGACGTTGATGGAAAAAGCATTTTCACTCT
CGTTTCCACAATCACTTTTACACGAAAAAACTAAACCAAATTCTTTAAAT
TTATCAAAGTTTGGATGAATGGAAAATTTGATTTGCTAAGACGAAGATCA
GGTCAGAGGTAAAAACTGGAAAGGTTTTTCACACTGTTAATGGAGAAAAA
AGAATAATTTTATGGTTTCGAGAGTTTTCAATCTCAACGACACCTAGCAA
CCTACATAAACTTTTCGATTTTGACAGATGCACGTAGTGGAACCGCGAAC
CTCATCATAATCATAATAATAACTTTAACAAATTTAAAGAATTTGGTTTA
GTTTTTTTTGTGTAAAAGTGATTGAGGAAGTGAAGATGCTTTTTCCATCA
ACATCAAAATTTTCAAGAAGTCGTTTTCTTGCATCGTGCAATTAACTGAT
GTGATAATAATTCAGGGGGGCAGGCTACGAGTTTTCCTTTGTTGATCAAT
AATAAAAATGGGGATAGAGACATAATACCAATAGAGGAATAGCAGGTGTA
AGTAAGTAAGTAAGTAAGTAAGTAAGTAAATGATTTATTTGTCCTAATAA
GCGAGACGAGCGACCACACTCATAGACAAAAAAGCTAAACTAAGGAGGTG
GCCGCACGATATAGTTACAAGATTGAATAATTTTAAAGGTCTTATTTTAA
GTAGAAATTGACAAGAAATTTTTCGTAAAAATGCTTTAAAAAAACAAAGT
TTAAAAATAAAATAACCAACTCAAATAACCAAATAACTAAGAAGACAAAC
TGTAACGAGAGCTAAGTATACGAAGACAAAAAGTATAACTTAAGAAAGTC
CTTAAGACGATCCAATGCAATTGTGGAGTTGTCATCAAATGTTAAGAAAT
GTTGAATTTCATTCCAAGCAAGAATTGATTGGTATAAAACTGAGTAATTG
CCATAAGTCACTGTTTTTACTTCGGGTATTTTTAAAAGTCCGGACTTAGA
ACGGATAACTTCATGACGATCAGTATCATTTAATCGCTTATACTCGAGAC
TTTGCAATAAAGGAGTAGGAAGTTTGTTTTTTAAGTGCTTGAAAAGAAAG
ATAATATTTAGATATTTGACAAAATCGAAAAAGCGAAGAATCTTGAATTC
TAAAAATAAAGGAGATGAATGTGCACGAAAGTCAGAGAAAGTCATAATCC
GAAGAGCTCGTTTTTGAAGAATGTGGACCCTGCGAGCATAGATTGTCTGC
CGTTGACCCCATATTTGGGCTGCGTAAGAAAGATGACATTGAGAAATAGA
ATAATATAATGATGTTAATGTTTTCTTGTCGACATAATGCCTAAGTTTAC
TGAGAGCTCCATTAGCTCTCTTTAATTTATTACAAACAAAGTTTATATGG
TGTTTCCAGTTCAAATGTTCATCCAGATATACACCCAAATACTTGACAAC
TTTGCTTGGTATGAGTTTGCGTCCATTGACTTTGATTTTTAAGTCATAGT
TGATCTTCTTTCGAATCGGACGAAAGATCATAAGTTCAGTCTTACCAACG
TTTAACGAGATCTTGTTCGCCTTCAGCCAGTTCATGAGAAGCTTAAGGTC
GATATTTGCTCGTTTAGCTATAGGTTTTAAAGATTCATCTCTCAGAAAGA
GCATAGTATCATCAGCAAACAGGTTGACAAGAGAATATCGAAGAGCAGTA
TGAAGATCGTTCACATAAAGAAGGAAAAGAAGGGGGCCAAGAACAGAACC
CTGGGGGACACCATGTTGCATGCGTCTAGATGTAGAATTTTTACCTGAAA
CTGAAACAAACTGTGATCTGTCAGTTAGAAAAGAACGAAACCAGTCAAGA
GATTTTCCCCGAATGCCATAGAAATCTAGTTTAGCTAGTAAGATGGAATG
GTCGACAGTGTCAAAAGCTTTTTGCAGATCAATAAAGATGGAACAACCGA
AATCACCTTCATCCAAGGCACTTGAGATTTGGTTAACACAGTAAAGAAGG
GCTGTCTCAGTAGAATGTCCAGAGCGAAAACCGAATTGTAAAGAATATAT
GGAATTTGTCTGATCAAGAAAATTTATCAGTCGTTTGTGCATAAGTTTTT
GAAAAATTTTGTCGATGTTTGAAAGAAGTGAAATGGGTCTGTAATTTTCA
GCATCAAAAGGAGATCCTTTGTTTTTGAAGATCGGAATGACTTTCGCTTC
TTTGAGTTGACTTGGAAAAACACCAGTAAAAAAAGAAAGATTGATGATGC
CAGTGAAGATCGAAGACAGACTATTTAGGTTAGAAGAAATAATACGATAA
GGGATGCTATTGGGACCAGAAGCTTTGTTCTCACTCAAGGACATTAAAAC
TTTAGAGAGTTCGAGTTTGGAGACTGGCGAGATGAGAAAGTTATTAGGAT
TTCGACGTTCATTTGATAGCCATTCAGAAAAGTGATGACGTGTGAAAGGG
TTTTTTGATCGTATCTTACCAGCAATCGTTGAGAAGAAATCATTGAAGCC
TTCTGAGACTTCTTGAGGGCATGAAGAAAGAGAGTCATTGATGTTGAGAG
AAATACTAGACCTAGAATTCGAAGAAGATATGACTTCCCGGACACCTTGC
CAAAGTTTACGAAGGTTATTAGAGTTTTAATTCTTGTTGGCAAGGTGATT
GTTGGTAGCATTTGGTAGGCACCGAGATTGTCGAGAAACGCAGAGTGAGA
AAGGTCAGTGTCACAAGTTAAAAGATCGATGTTGAAATCACCTAATAAGA
TAAGATTTTTATTTTCTTGGCAGGCTTTCTTCAATAAAGGAGATAAAAAA
TTTTTATTAAAAAGATCAACATCGAGAAGAGGATGTTTGTAGATACAACC
AACGATGAAGTTTTTTCGATTCTTCAAAACAATCTCAGCAAAGGTGGATT
CAAGATTGCCGCTGTTAGAATTAATAAAAATTTGAAGATCCTCACGAGGT
TTGCCTTTAAGAGATTTAGAAATAAAAAGGGCAGTACCCCCAGCAGTGAG
ACTGCTGGAGTATCAAAAGTATTGAAGCCACTGATGGAAAGTTCGGTATC
TTCAATTTTAGAATGGAGCCTTGTCTCAGTGATACCGAGAATACTGAAAT
TATGATTAAGATCAGAAAGTAAAGTTGTAAGATTGTCATGGTGTTTTTTC
CAAAGAACAGATATTTAGATGGAAAGCAGAAAAAGATTTTTTCTTAAGAG
GCAGAGAAGAAAATTCTTGAGTACTATAATATTTGCAATTAAAGTGAGAT
ACATGATCGTCATAAGTTATATCGTCTTCTTGATCGTCGACTTGAGAATC
AAAGTTAGAAAAATGATTAGATTTTGAGTTGAGATGTTTAAAATAGGATT
TTAGATGACTTATGTCTTTACCAATAGGTAGTTTATCCTCAGTTTCAAAA
TTAGGTAAAGCGTCTTGCCTGCAGAGTTTACAGAGCCAGATGTTTTTTAC
AAATTTTGGTTCAACGCCGAGGCACTTTGCATGGGATCGTCCCTCACATT
TTCCGTAAAGGATTTTAATTTCTGGTACCTTTTTCTCCTTTTAGACTGGC
TAAGAGCAGTCCGAGCATTTATGATTTTGGGTATAGTTGCCAACTTTGTT
GCGATGCTAGTTGCTTTGATGGGCCTGTTGAGAGAAGATATTTGCTATCA
CATCGTTGGTTATACTCTACTCGTGAATGGTAAGTGACGTTGTTTTTATG
TCCATTTAACATCCATAACATCCAAGTACACGTTTTTATAAGAATAAATT
ATATAAAAATACTAGACTTCGGTTACCATAATGTTAAGAACTAGGCTTCT
GCTCATCCTCTAGCGAAAAAGTTTCTCATAGAAGGAAGTATAGGTCTGCG
AATCAGACTAGTTAAGAACAGGCTAAGAACAGTTTAAGGCTTTGCAGACC
TTAAACATCCGATTTCTTAGAAAAATGGACAAAAGTAATCAAAAAATGAA
AAAAATATGAATATGTTTTGAGAACATTTTTAGGCTTAAAACTCAAAAGG
TAGAGAAGGCTTCAAAACTGTTGGATAAAAAAACGTGTGAACGCTGGATT
TAATCAACTTATTTGTCAATGATTTTTATATGAATTTGTTTGGCTACTCG
AGTCAAAATTATATCGAGCTTAGAAAAAAGCTATCTTAATCATCTTGCGT
CTTCAAAATCAGTTAATAGTGCTTCGTTTCTTTACTAGAATGAGGTATAC
ACAGTAAACTTTCGCTTATTCGAAATTCTACTATTCGAATCTTTCTATAA
TTCAAACTTGTTTCCAGTTCACGTTAAGGAGAAACTTTCTTAACACTTTC
TTTGATTCAAATATCTTTGTAAGGAGCAAATAAATTTCTCGGTTCGAGTT
AGCGAGATTCAACTGTATTATTTACTGGTGGTGACGGTAGGATGTACGCA
CCCCCTCTGATATGTTTTGATATAAGAGTAACTTTTTTCAATTTTCAGAA
ATCAAATAATTGTATTAACCTAAAAAAAAATTTATTCAAATTTAAAGGTC
TCCCGTATAAAGCATACACTAATCAAGCTAATCAAGTTTCTGAAACTCAA
AAAACAAGAGACGGGTGTAACTCTCGGACGAGAATTTTATACACGATGCA
CATCCCCTAGATGCGTGCAGCCTAGTATGGTGGTAATGATACACCCCTTT
CTCACTGACCCACTGAGAACCCTTTCCACTGGGAAAATTGGCTAAAATAT
CGTTCCTAGTGGAAAATTATACTCTAATTTTTGTCACCACTGAAAATAAT
CAGATAATCAAATCTTCACTGTTGTGCTATTTTCTGGCTCAAAAACAATG
GAATTCGAATTTCCATCCATATCAATATATCAATACCCATTGAGTTTTAG
TCCATTATTTTTACCCTCACTTGCCGATGAAATCCCACCTGGTCTGTGAG
AAGGGGATGTAATGATTGTAATATTTTCTCCATTCTAGCTATATTCATTA
TGATTGGCTTATCAATTTACGCGGGAAAATCTGGAATACCTTTCAAGCGG
AATATCGAAGAAGGGTATTTTGCGTGGTCTTTCATAGTAAGTTGGATTAC
ATGGTTGTTAACCATTGTGGCGTGCGTTATTGCCTTCCTTGATGATTGTA
TTGGTGAAAGACCAACTTTCCAGCATGAGTAA Coding sequence (CDS) from alignment at sc0000259_pilon:126889..132520- >XLOC_003282 ID=XLOC_003282|Name=XLOC_003282|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1086bp|location=Sequence derived from alignment at sc0000259_pilon:126889..132520- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTCGCAGTACGCTTGACCGTATCAATCATAACTGTGGTTACACT
TGCTATGTATTTAGTATGTACGACCACGGATTATTGGCATGCAACCGAAT
ACCATAACACGCTGCATCGCCAGTCGGTGATTCAAGGGACCCATTCGGGA
ATATGGAATGGTTGCTATGTTAGAGACCACAAGGAATTATGTGGACATAT
CCATCGAGAGGGTCATGGTTTTCGCAGTACGCTTGACCGTATCAATCATA
ACTGTGGTTACACTTGCTATGTATTTAGTATGTACGACCACGGATTATTG
GCATGCAACCGAATACCATAACACGCTGCATCGCCAGTCGGTGATTCAAG
GGACCCATTCGGGAATATGGAATGGTTGCTATGTTAGAGACCACAAGGAA
TTATGTGGACATATCCATCGAGAGGGTCACTGGCTAAGAGCAGTCCGAGC
ATTTATGATTTTGGGTATAGTTGCCAACTTTGTTGCGATGCTAGTTGCTT
TGATGGGCCTGTTGAGAGAAGATATTTGCTATCACATCGTTGGTTATACT
CTACTCGTGAATGACTGGCTAAGAGCAGTCCGAGCATTTATGATTTTGGG
TATAGTTGCCAACTTTGTTGCGATGCTAGTTGCTTTGATGGGCCTGTTGA
GAGAAGATATTTGCTATCACATCGTTGGTTATACTCTACTCGTGAATGCT
ATATTCATTATGATTGGCTTATCAATTTACGCGGGAAAATCTGGAATACC
TTTCAAGCGGAATATCGAAGAAGGGTATTTTGCGTGGTCTTTCATAGTAA
GTTGGATTACATGGTTGTTAACCATTGTGGCGTGCGTTATTGCCTTCCTT
GATGATTGTATTGGTGAAAGACCAACTTTCCAGCATGAGTAACTATATTC
ATTATGATTGGCTTATCAATTTACGCGGGAAAATCTGGAATACCTTTCAA
GCGGAATATCGAAGAAGGGTATTTTGCGTGGTCTTTCATAGTAAGTTGGA
TTACATGGTTGTTAACCATTGTGGCGTGCGTTATTGCCTTCCTTGATGAT
TGTATTGGTGAAAGACCAACTTTCCAGCATGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000259_pilon | genome | sc0000259_pilon:126889..132520 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 352-543:193 |
| Aaloc | 217-348:1587 |
| Aaloc | 1-213:5633 |
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