XLOC_003191 (mRNA) -

Overview
NameXLOC_003191
Unique NameXLOC_003191
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000058_pilon:542711..551446-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003191 ID=XLOC_003191|Name=XLOC_003191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8736bp|location=Sequence derived from alignment at sc0000058_pilon:542711..551446- (Clytia hemisphaerica_ch_hm2_pilon)
CTCATTCAAAATCCAATCTTCTTGCTAGGTATTGCTCCAACATCCTTATC AACACAGAAACATGAAGCATAAACAAACTAAATTAGAATGGCAAATGTAC ACATCACAGAGGCACAGAAATTTGATTTTATAATTTTTTACAAATCACAA GTCCAAAGCAGAAAAGAGTTCTATAGTAAAGAAGGAGAAAAACTTGATTT TTAAGACATATGTATACAAAAGAGAAACTAAAATAACTTAATTAATCCTA GATTTGTAAAAAAGAGAAATTGTCACTAACCTGAGATATATTTATTCTCT GACACTTTTCTGTTCATTTTCCATTTTCGACCTCCATCCCACAACTCCAT AAAGAAATATTTATAGTATCTGTGGAGGAGATTATATAAACAAAACACTT CATCGCTGAAGCTATATAGTTCATTCGATTGAAAAATAAAACGACGAGAT AAAAACTCATTTCACTGAGTATGATAATTTAAAAATGGCGGGAATTCTAA AAATGGTAGCGCATTCAGCATGTGAAGAGGAAAATGTTATATCGGATGGC CAAAAGTCACCTCACCTTCTTTTCTTTTCTTTCCTATCTCTTATCCTATT TTTCTCTTTTCTGACTGTCTGAGTTTCTGAGACTTAGTTTCTCATTTCTG ACTGAGTTTTCATACCTGTCAATCAATTGTCCATCAATTTCGACCAGTCT AATTTTCGCACCGAGTGGGATTCGAACCACCACCAAAGAAAGACCTTCAC ATTCGGAAGCCAGCGCTCTATCCGTTGAGCCATCGCCGCACAGCAAAACC ACGCAATTCATAACAAATTATACCGAACTGGCAAAAGACGGGGGTAATGT TATATTAATATGGGTAACAGTACCCCTTTTTTAAACCTGACTGAAATTCG AGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGG CACAGTGACAAGCCGTTACTAGCAACCCTGACCCTACCTAACCCCCGGAA AAGTGACTATCAGCGATCCGTGGATAAAAAAATAAAATTAAAAAATGAAG GTGACTATTGGCCATCCGATATAAGAGCAACCATGTGAAGAATGTAGCAT GCGATTTTAAAAAACTCCAGCATCGAAGCAATAACAAGATAATATTTTGT ATACACACTTTAGTAACATCATTGCATCAATGTTAAATGCTGTAGGTTTA CTTATCATCCAACATGATCATCGTAAATAATTAGGAAAAGAAAAGGTCTG TGCTCTGTCTGTGTCTGCTGTATATTTATTCTCTTCTTGTGTTTTACTGT TTGTGTCTTGTAGTGAGGTATTTTTGGACCTACCCCGATGGGGTAGAGGT CCTATAAATTAACCGATGTCCGTCCGTTCGTTCGTCTGTTCGTTCGTCCG TCCGTCTGTTACCAGCTTTTCTCAATGTTGACTCATTATTTTTTTCTGAT TTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATTACGGGTGCATGT CTAGTCCGACACTTTCTAGTCCGACAGTAAAATAGTCCGAATCTATAAAA TAAATTTAAAATTTGGTAGTCTTTTTTTCCGACGTCACTTTTGTCCGAAA ACGAAAGATTTTTGAGTGTCAAATGTTGAATAAGGGTTTTTCACTGAGAT AATATTAATAAAAGTTGATTTTGGCGGAATTTTGACATAATTAGAAATAA AGGAACAATCAGGGTTACAAATCACTAAAGAAGAGTCGTAAAAACAGCTA AATCCAATTTCTTGACTCTTGAAAGCCTAATCCTAACAAGCTTACCAAAA TTTAAGAAAAGTCGGGTTTAGGGGCCTAACCTCAAAATCGGAACTTTGGA TTTTTAGAAAAAAATGTGCCTCCTCTTCCGCGATTCATATTACGTTTTTT ATATGTTTTTTTTACTCGTTGTCGGACAAAATTGTTGTCGGAATACTGAC GCATTCGTCAAACCCAACGTTGGACATTTATACTGTCGGACTAGAAAGTG TCGGACTACTGACGACCTCCCAAAATTACGGAGCCCGATTTTCGAAAAAC ATTTTTTTACGGCCGAAAATGCTGGAAATATGCCGGAAATCGCCGTTTTT CTAGATTTTCATTAGATTTTTTTCTTATAATTGGTGGTTTTTTTCATTCA AAAACATTATTAATAGCAATCAAGCATGTTTCAATTTTCAAAAAAATTGA TTTTTGAAGCCGGAACTATTCAAAAATCGCCGGAAAAACCTATTTTTGCC GGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTACCGTGAGAGGTCCTA AAGCCGACAGTCCAGCCTAATTCCGATCCCCTAAATAACTGTTATGAAAA AAAATTCTATGTTTACAAACATTCCCTCTCCAAGTTGAACGATAAACTAT TGCTAGAACTCTCGAAACAAAACATCTAACAAGATAGCTGTAATGTCAAG ATGTCAATTAATGTAATTAAAAAGTGCGATTTGTAAAAATAATTACCTTT TATTCTGGATCAGTTGCTCATGTTTAAAACGATAACAGTTTTGTAATAAA AGTGACTTGTGCGGGAAAAATACGAAACAACTTGGACTAGTTTCCATTAA GAAACAAACAGACTAAATTGTAAAAATGGCGCGAAGTTGAAAAAAGGGCG GATGTGGTAGCACTAATTTGAATAACAAACATCGAATCAATGAGGCGGCA ACTATCAATGCCCTTTTTACCACCTATAATTCCGGATGTTTATTTACGGA AGGCCCACAATCGGACAGCTCTTCATTTAAGTGTACTCTTTGACGACATA TATTATCTTTACTAGAATAGGAGCAAGGTGTCATGTAATATATAATATAA TGTAATATACGTCGTCTATATGTATCCTTACACAAAGTCTAAACCCTGCA ATCAAGCCAAGTGCCAGTGTAAAGTAATAGAAACCAGGCTTGATTACGTA ACGTTTCAAAATGAGCACGCTCGTACACAGACCTCTTTTATATTTTCGTG TGCTTTGGAAAATCAAAACATCTCGTTACTTTTTATGATCATGCTGTTAC TACTGTTGTCATTTATGACGTTGTGCATATTATTGCAATAAAAAAATATG TTTTGTTATAAGAAGCAATTATTGTTATTTGGTTCAATTGGTTCAGTGTA TCAAATCTCTCAGTTTAGTTGACACTTTGGTATCTTCGTTGCGTCACAGC GAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATCGGCT TTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACGGTACTTAATATTTTTT TATGAAATTTTGCGCACTGATGAAAGATGAACCGGAACTTTCTATTTCTA TTTTCCCTACACTCCCCTTCCCTCTTCCCCATCAACAATCAATGATAAAA TTTAATGTGTTATGCATTTTTGCAAAACGCTATATCGTCTGACTGATTGT TTTCATTTTTCTCCTTATTGCCTTATTATCTAGCTTTCATCATCAGGTAG GTCCATTCAGCATGTTGCTTGTTTTATGTTATGATAACAAGGCGTTGACA ACTAACAAACCTGTAAAGGGTCATTCAGATAGTTTGTATATTGAATGAAA TACTGTGAAGTCGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCC TCGAATGAATGACCTGGCTGGTCCTTAAAATACAAAGTTAAATCAAAACA AAAATGGTAGAGTAGAGCTGCGAGCAGAGCTGCGTAGGGCGGCAATCACA AATATCTTCATTTCGCGTCCTCGTTGAGTCGGTCGGTTGTAAAAATTTTC GGGTTTCCATTTTTCCATCCATTTTTGGAGTGCATTCTTGGAGGAAACCA CCAGCCAGCCAGCAGCCAAAATAACCGCGTGTAATGGGTGGTTTAAAATT ATGACCTTTGAACACTCTGACCTCCGACCCCAAAATGGCGCATGTTATGA TAAACAAAGTCAAAATGCTGCGAATGCGCTAGAAATCGCTCGCTGAATGA AAATCGGCAATAATAAAATTATTGAACGAAGGAAAAGTCATTGACATAAA AAGTCCGACAAATTTACCGACTCACCGACTCAATTCTACTCAATTTTCGA GAGTCGGGCGGGCGACGCGAAACGAAGATATTTGTGATTGCCGCCTAGTT CATTCATTTGTTTTTAAATTTTGCTGCTTTGATTGGTCGGTCATTTGACG TCATATGATATGAGGCCTATAAATGTTAGCCTCCAATTATGCAACTTACT CGACTTCACGGTAGACCTTTGGTAGGGTACTAGTGTCATTTTGCATAAGA TTCCACTTTGCACACTAAGATTTTCTCCTGACTTTTCCACTATTTTTCCC AGGATAACCGACATATCATGAGATTAGAAAGGGTTTTTTTCTAAAGGCAC AGAGAATCTTATAGAATCTTGTGTTTACTTACTACATGATTTCCTCAACT TTTTGAAGTCCTGGTCTTTTTCTGATAGAAAAGTGACAGCCAAATCTTAT TAGTGCAGGAAGTGGAATCTTATACAAGTAAACCATTATTGTGAATAGTT GATTGAGAGAAGGTGACTGTCTATTGAATAGTAAATTACTCCAGCCAGTA AAACGGGATAAATTATTTTGTATCTACCGGGTGTGCCACAAATAAGTTAC CCTCTTTGATTTGATATTGTAGGCAGTAGAAAATAGATTTTTTAAAGATT GTTTTGGAATCATTCAGAGGAAAGCCTAACTTAAAATTTGGTGTATTACT TTTAAATTTTACTTCATTGGTTCAAAAGTTATGTTCAAAAACCTAAAATG TCATTTTTTTAAAATGTCAATTTCTGAATGCTCAATTTTTATCTTTTTTG GTCACTAATATTATTCATAATGTTTTTGGAAGTCTTCAATGAGAACAAAA AGACTCATTTAGGAATTACAAATTAGAAAAATAGAAAAAAATCTACTCTC TAAGGGTCACTTTCTTACAAAATTGTTTTTATAGGAGCAATTTTATGAGA AGAGGATGCTGAAAATTAAAAACAAATTAATAACAATCTGAAGCTCAGCT ACAGCAAATATTTAAATACAAAATAATGAGACCAAGGCTGAATCAAGAAT ATAGAGAAATAAACACCATTACTCTTAGGTGCCAAATAAACCTTATTGGG ACCCCCATGTTTATTAATTTTAAGAATATTTTCAGCTGTCAAAGAGAAGG TCCCTTATTTTGCTCTAAATAGCCTAATTTTAGCCTATAATTACCTTATT TTGGGGTTTTCAGAAGTACAATTTCCTACCCCCCCGGCAATAAGGTCCTC CCCCCCGTTTATTGAAATTTTGCAACCCCCTGTTTATTCGACCCCCCCCC CCCGTTTATTTGACACCTAAGAGTACACACAGGGGCTTAGTTACAATTTT TCCCCAATTAAGAGGGACAAGCTGGAGTTTTTACAAGCCCTTATTTGATT TGGTTGGTCGTTAAGATGTAATAAAAGAATCTTATTACTTTTTCTAAAGA ACGCGTCATCTCTATCACTTTAAATTACCAATTAGTGAAGTATCTTGTAA AAACTCCAGCTCATCCCAATTAAGAATCTGAATTAAAAACATTTTGGGGA TTTCATTTTCCAAGAACATTTTGTCATATTTTAGGCGAGGAAAATATAGA AAACTCTAAACGAGAAAAATATATCCTATATTGTACGAGTAAAAGTGTAA TAACTGGTTTATCGTCAACTTGAAAAATATCAACAAACTTTTCTCTCTCC ATTTGTGTCTTTTCCTATGTTTTTTTTTCTCTTCCTGTTTTTTCGCTCTC CTCTCTCAACATCAAAACATTCGAAAATAGTCTTTGGAATCGAATGGTCA TTAAAAAGAAAAATTCTTTGAATAAACCTTTGTCTTGTCTATTGTAAGCA AGAAAAAAAACATTTCTAATCATAAAATTGTACAAAATATGATCTCTCGC TTACCAGCCCCCTTTTTTGAACGTGGTGTTGTTTGTATTTGTACAGTACA AAATGAAATACAGCATTTATGTACACATTTTTAGCCAATCAGATTGCTCA TATTTTTCATGATGACAATAACACTCAAAAGCATAATTAGTAAATAGGAT GAAATTTTCACCTCAGATGCATCCTGCTGAGAGAAAGCAATTCACAAAAA AAGCAATTAATTTTTGCAAATTTCTGCTGATGTCATAATCAGAAAAATGG AATATTTTTTTCAAAAGTTGGAGATTACCAATACCTGTCCATTGGGCAAA TTTTCAACATCTTTTGATTAGTACTTTTTGAGATATTTAAATTCTAATTT TTATGACGTCATCAATAAAGACAAGAAATTTATTTTATTAACAGGCATTT CTGAAATCTACATCCTATTACGCTTCTTTTGACGTGTAAATGACCGAAGA CCCTCACTTTTCTGCGCCAAACTTATGTCCTTTTATACCATACGTTACAC AAGATGAGACAACACTTGAAGAGAAAATTTTGACCATTGATTTAATTTTT TCTAATCTCAAAATGGAAAAGTTTTAAGAATCACAAGGCTTACTTTGATT TATGTAATTTTTATTAAACTGTATCATATAGGCAAGTTGTGAGGCCTTTG AAATCTGTTGAATATACACCCCCTTCTCACAGACCCACTGTGACCCCTTC CCACTGGAAAATTTGGCCAAAATATTGTCCCCAGTGAAAAATTATACTTC AATTTTTGACCTCACTGAAAATAATCAAATAAACCAATTCCACTGCTTAA TATCATGGATGTTATGGGTTGGTATGGGTTTATTAGAAAGACTTCCTAGA AACTACATAAAATTTTCAAAATCAGATTTCCATCGTAAAATACACTTTAT ATTTACGTTTTTAAGGGCCTCTTTCAATTTTTTTTGGCAGATTTGTCAAA CTAAAATCATGCATTCAATACCCTTAGAGAGAGAGAGAGAGAGTTTTAAG AAGGTGGTGACAAATACTAGAACATAATACAATATCTTGGTGGTCTTTAA AGGTGTGTTATGGTACTTCCCTTACCTTCTCATGCTCCTCAGGTACTTGT AGTTGTTAAAGGTAAAATCAGATGGTTTGAGATATTTTGCCTGCAGATAG CTTCTAGGATTTTAGGAAAAACCTCAAAATTTTTTGGTGTACTTATTTTC CTAACTCAAGTTATGCCACTTTGAAATTTTGAACCTTTGCTTGAAAACAA TAGAAAAAAGTGTGAAAAGTCCATAGTGTGCAGAGGGGTCTGAACCCCCC CATTAATATTTCATCCCCCCCTATAAAGGTATCCCCCCTATTTTTAAAAT TTTTTGATCCCGCACCATTTACAGGGGTCCGAGCCCCCAGCATATAATTT GTACTCCCAGTATTGGGGAAGAATTTTGATGAATAAAATATATTTTTCAG TGTGAATTCGTACCAATACAGTAGTCAATGAACTTGAAAACACTAGCAAA TAAACAGTAAACTAATAATAGTAAAACTAGGAAAAATAAGAAATAAGACA AAAAGTTACTATCCCCCCCATTTTTATTTGACCCCCCCCCCTATAAGCTC AAACCCCCCATTTTAACTGGAAAATTGCCCATCCCCCCCCTATAAAGCCT TCCTTGAAAACTCGGATCCCCCCCCCTTAAAAAAGGGGGGGGGGTTCATA CTATGAAAGTCCCTGAAAAGTCCCATTTTTCGAGATTTCAAATTGGCATA ACTTGAGTTAAGAAAATAAATACACCGAAAAATTTAGAAAGTTTTCCTAA AGTCCTAGAGGCTAGCTGCAGGCAAAATATCTCAGACCATCTGATTATCC CTTTAAGGCAGGTATCAAAATATACTTTATTTTATTTTAGAACAAAAAAT AATGGATTATACCAAAGAAGAAAGTGATTTTGAAAAAACGCGCAAAGAAA ATATCAAGAGAAATGAAGAAGAATTTCAAAAGCTTTTTCCGGCTATGCTG CTTAAACCCTTCAAAGATTCACCACGTACCACTGAAGTTCGTCGTGCACG ACGCAATAACTTACACAGTATTGTTCAAACAATCACTCCTAGGGAATCTT TGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAGTTTGGATACTTTTTCT GATTCTGACGATGGAGGAGATGACGAGGTAAGCAATGGTAGTTCTGGATC TGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAGAAGTTCAAATCGCTCA GATATCAAGATGATGTTAAGGATAAAGATTTCATCTACGATGGAGATTCA ATTTCTGATGACGAGCACCAAGAGGAAGGGAAGAAGAGGAAGAGTAAAAC TCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCAGCACGTGTTTTGCGTC CTTTCGATGCAGTAACTGAGGAGGATTTGATTCTAGTGGCTGATCGAACG AGCGATAAACGTTATGATCAAGTGGATGGTACGAGTTGTCATCAATGCCG TCAAAAGACGGACGACTTAAAAACAGTATGTCGTAGTGGGCACTGTGTCG GTATACGAGGCCAGTTCTGTGGGCCATGTTTAAAGAATCGTTATGGTGAG TGTGCAAAAGAAGCCATCATGAATGCCACGTGGCAATGTCCGCCATGTCG TGGTATTTGTAATTGCAGCTTTTGTATGAAGAAACGAGGACGTCGTGCTA CAGGTATTATGATCCATGCTGCAAAACAAAGTGGGTATACTGATGTCTCC TCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAATGA

Coding sequence (CDS) from alignment at sc0000058_pilon:542711..551446-

>XLOC_003191 ID=XLOC_003191|Name=XLOC_003191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000058_pilon:542711..551446- (Clytia hemisphaerica_ch_hm2_pilon)
CTCATTCAAAATCCAATCTTCTTGCTAGCTCATTCAAAATCCAATCTTCT
TGCTAGAACAAAAAATAATGGATTATACCAAAGAAGAAAGTGATTTTGAA
AAAACGCGCAAAGAAAATATCAAGAGAAATGAAGAAGAATTTCAAAAGCT
TTTTCCGGCTATGCTGCTTAAACCCTTCAAAGATTCACCACGTACCACTG
AAGTTCGTCGTGCACGACGCAATAACTTACACAGTATTGTTCAAACAATC
ACTCCTAGGGAATCTTTGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAG
TTTGGATACTTTTTCTGATTCTGACGATGGAGGAGATGACGAGGTAAGCA
ATGGTAGTTCTGGATCTGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAG
AAGTTCAAATCGCTCAGATATCAAGATGATGTTAAGGATAAAGATTTCAT
CTACGATGGAGATTCAATTTCTGATGACGAGCACCAAGAGGAAGGGAAGA
AGAGGAAGAGTAAAACTCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCA
GCACGTGTTTTGCGTCCTTTCGATGCAGTAACTGAGGAGGATTTGATTCT
AGTGGCTGATCGAACGAGCGATAAACGTTATGATCAAGTGGATGGTACGA
GTTGTCATCAATGCCGTCAAAAGACGGACGACTTAAAAACAGTATGTCGT
AGTGGGCACTGTGTCGGTATACGAGGCCAGTTCTGTGGGCCATGTTTAAA
GAATCGTTATGGTGAGTGTGCAAAAGAAGCCATCATGAATGCCACGTGGC
AATGTCCGCCATGTCGTGGTATTTGTAATTGCAGCTTTTGTATGAAGAAA
CGAGGACGTCGTGCTACAGGTATTATGATCCATGCTGCAAAACAAAGTGG
GTATACTGATGTCTCCTCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAAT
GAAACAAAAAATAATGGATTATACCAAAGAAGAAAGTGATTTTGAAAAAA
CGCGCAAAGAAAATATCAAGAGAAATGAAGAAGAATTTCAAAAGCTTTTT
CCGGCTATGCTGCTTAAACCCTTCAAAGATTCACCACGTACCACTGAAGT
TCGTCGTGCACGACGCAATAACTTACACAGTATTGTTCAAACAATCACTC
CTAGGGAATCTTTGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAGTTTG
GATACTTTTTCTGATTCTGACGATGGAGGAGATGACGAGGTAAGCAATGG
TAGTTCTGGATCTGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAGAAGT
TCAAATCGCTCAGATATCAAGATGATGTTAAGGATAAAGATTTCATCTAC
GATGGAGATTCAATTTCTGATGACGAGCACCAAGAGGAAGGGAAGAAGAG
GAAGAGTAAAACTCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCAGCAC
GTGTTTTGCGTCCTTTCGATGCAGTAACTGAGGAGGATTTGATTCTAGTG
GCTGATCGAACGAGCGATAAACGTTATGATCAAGTGGATGGTACGAGTTG
TCATCAATGCCGTCAAAAGACGGACGACTTAAAAACAGTATGTCGTAGTG
GGCACTGTGTCGGTATACGAGGCCAGTTCTGTGGGCCATGTTTAAAGAAT
CGTTATGGTGAGTGTGCAAAAGAAGCCATCATGAATGCCACGTGGCAATG
TCCGCCATGTCGTGGTATTTGTAATTGCAGCTTTTGTATGAAGAAACGAG
GACGTCGTGCTACAGGTATTATGATCCATGCTGCAAAACAAAGTGGGTAT
ACTGATGTCTCCTCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_003191XLOC_003191-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000058_pilongenomesc0000058_pilon:542711..551446 -
Properties
Property NameValue
Aaloc31-924:895
Aaloc1-27:8737