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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:626125..629386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003183 ID=XLOC_003183|Name=XLOC_003183|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3262bp|location=Sequence derived from alignment at sc0000142_pilon:626125..629386- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAGGAAGTCTCGTCTATTCAAGAAGACGACCTCGTCAACCAAGAC
TCTAAAAGAGTTTTTGAGTAATGCTGAGGTATGTATGAACCTTTCTCATA
CAAATTTCCCCTCGTGATATGATGTGATTTTGTTCAGTCTTGTCACAAGT
GTATCTTTGATTTATCCTCCCTCTGACTTATAAATGTTTATATATTTTCT
CGCGCCTCTTTCACTTTTGGTGCTTTGCATTTTTTGAAAAACATTTTTCG
TCTAACGTCTCGCGTATGATGGACGATTGGTTTAGTAGCCCCCCCCCAGC
GGTTTGCGTGAATGCGTGAAAATCTAAAAAAAATTGCGTGAATGCGTGAA
TTGAAAAAACTTGCGTGAACGTGAAAATCCATATTTCTATTGCGTGAATG
CGTGAATCTGCCCTGTCTTTTGCATGAACGCGTGAATTTTTCCTTTTCAC
AGTTTGTAGAAAACCCCAAGGTGCGCACCTATCCCAAATTCAAGGGATGC
CAGGTGAAGGTCCACAAAAATGTCAGCAACTTTCAATTCTCTATTTTTAA
AAACGGTTCAAGATTTAGATGCGCTTTCTAGCAATCTAGACACCTTAAAT
TTCCAGATTTTTCGCTCGGGCCAAACATGTATTGGCCCTCGAATCTTAAA
TAACTCTAATTCGCCCCCCTTGAAAGTGTTTGTTTAAGATAAAACCATGG
TTATACATGATGAGTCATCCAGGGCCAGAGCCAGAGCCACTGGGGGCAGG
AGGCGGCCATGACTTCACCACGTTTTTGCAAATAAAAAGAAACTTATTTC
CAAGAAATCTTTACCCATGATGTAGACTTTCGATAACCTTATTTCTTGGC
AAAATTAGTCTGAAATGGAGTAGTATTTAAGCACATCAGAGGGCTAAAAT
ATAAATTTTCTCCTGTCGGCGCAAAACATGGTTGCGCCTCCTTAGTCACT
ATGTTTTCGGCCCCTACACGTTAGGAAATTAATTCGCGAGCCCTGATTAA
AACATTTCTTTTTAAATTTTGTTGATCGCCTCGCTCGCAACAAATGTTCA
TTCTTTTACCTCATTTTACAAGCTATCAAGCGATCGCACCTTGCCTCTAA
CGAATTTAGACTACATTCTTCTTCAAAGAGAGCATTTTTAGCCAAACGCG
AGTGACAGAAATGCAAAAATTTCCTCTCTGCGTAAACCATGGTTGCCCCT
CCTTACCCCTAAGCTAAGCATCATGGTGTTATACTCGAGTTTGTTTGACC
TATTTTTGATAATGTTTAAGCTATTTTTTGTACAAAATTTGCCTGCGGCG
CATATCTTTTCACTTACTATCGCGATACGTTAACTGCAGAAGCTTTTCCA
AACGATCGTGACAAGTTAGAAGAATCAAATATTTTGCGTGATGGCATGTG
ATTAAAGTTGAAAAATTACGTAACACTTTCTATTTGGGGGCTTCTTATGA
CGCTACCAAACACGGTGTTTTATAGTCAGGTCTACATGAAAAAATCACTA
CTGAGTTAAGTTTTTCTCAAGTGCGGTCGAATAATATCTCGAGTACAGCC
TTGTCATACTTTTTTATGCAAATCGAACGTTTTACTCCATAATGGCGGAA
ATGGCGGAAATTACGTAAATTACGTAACTTAGCGATATGTGCAAGACCTC
TATTTTCGACATTTTCCCCGATTTTTTCCGAAAATTTCCCCGATTTTCCA
AAAAATTGGGTTTGCGTGAATTCCGAGAAAAACTTGCGTGAATGCGTGAA
TTGCGAAAAATTTTTTGCGTGAATGCGTGAAATTTGGGTCCGCTGGGGGG
GGGGGGGGCTCTTAGTATGAGCGGCCCCCAGAACATCAGAAGTCTATCTG
TGTCAGAAAATTACCAAACAGTAAAAAGGTCGAATTTTAGTGGATGTAGA
CTTAATAAATACTCTTGGAACACCTACACAAACTAAAAACTTCTTGCTTC
GGCTTCTATATAGTTTGATTTACATTCATTTCAATAGCTGCTGTGTGAAC
TGGAACAAATTTTCATCAATTAGCACATCAATATACCATCTTTTTTTTCA
ATTTCAGGTCAAGCAGAGGGAAAAGGAGCTATCAAAGATGAAAGACAAGT
TAGAGTCCAACCAAAAATATTCAGATGTATTGAAGAAGAACCGACAGGTA
AAGAATTTGGACGAGGAAGTCATATCACCAAATAAAAAGAAAAAAAAAAG
AAAGAAGAAAAATAATCCGAACCCTATAGTCAACAATGTATCGCAAGATT
CAGATGCAAATAATAATTCCAGCCATGCCATTAACTTGACTTGCAAGTCA
CAAGCAAATCTTCAGCTGTGTAAAAAACACGACGTCTCACAAATGATCAT
AACGGATGATATCGGTAACAAGCAATTATTAAAAGATCAAGATGCTGTCA
AACAGGATAAGAATATCCTGCACACCCAATATGTACATAAAGAAGATGCA
GAGTGGTAAATACATTTTATCAGGAAAAGATCTTGGAAAAATTATCTAAA
ATTTTGAGGGGATGAGCAAAATCTTCCCTGACGGAAATTTTTCCTCCAAT
ATTCAATCCCCGGTCAAAAAATTGACATTTTCTTCATGTTTGTATCCCAA
GATTTTGAGGTAAAGATCCTTGAACATACGATTTTACTTGACTCGGGTTG
ATTTCAGTTTTCTCAGGAATAAAGGGAAACATCTACAAATTACATGAAAA
CTGCACGAGGATCATTTACTTAAATTCTAGCTCGTCATTTGAAGGCCTGG
CTGAAAAACTTTACAATGATTCGACTTTCCACCAACAAACGAGCAATTTA
TCCCTTAGCCACATATTCTTAAATCAAAACTTGATGAACCAGTAATTAAA
ATCTTCCCAGAAAACAATTTAAGAATAAAACAAGAAAAAACTCTGAAACT
TTAATGGAATACCATCCTGGGTTATCTTGAGACCAAAAGTATAGGCTAAC
CCCTCTGATGAATTTAGTTCATATCAAATTTCAAAAAATATAAACAGACA
AATTTTATTGTAACAAAATTTCCGTTCTATTTCACAAATCAGTTTACAAC
CAATCTCCAATGAAGAATGGAAGATGGACGATGGGAAAGGAGCAGCGTAC
CATGCCTGTAAATGGTTCAATATGATCCTGATCGTCGTTTCAACTGTCAT
GTTGGTGTTTTGTTTCATTCTGCACCAGGACCAATTCGTTTTCGAAAAAA
TAACCACTTCTGAATATGGTACTGAGGACCAGTTAAATGGAATATTTCTC
GACCATTCATAA Coding sequence (CDS) from alignment at sc0000142_pilon:626125..629386- >XLOC_003183 ID=XLOC_003183|Name=XLOC_003183|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000142_pilon:626125..629386- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAGGAAGTCTCGTCTATTCAAGAAGACGACCTCGTCAACCAAGAC
TCTAAAAGAGTTTTTGAGTAATGCTGAGATGGGGAGGAAGTCTCGTCTAT
TCAAGAAGACGACCTCGTCAACCAAGACTCTAAAAGAGTTTTTGAGTAAT
GCTGAGGTCAAGCAGAGGGAAAAGGAGCTATCAAAGATGAAAGACAAGTT
AGAGTCCAACCAAAAATATTCAGATGTATTGAAGAAGAACCGACAGGTAA
AGAATTTGGACGAGGAAGTCATATCACCAAATAAAAAGAAAAAAAAAAGA
AAGAAGAAAAATAATCCGAACCCTATAGTCAACAATGTATCGCAAGATTC
AGATGCAAATAATAATTCCAGCCATGCCATTAACTTGACTTGCAAGTCAC
AAGCAAATCTTCAGCTGTGTAAAAAACACGACGTCTCACAAATGATCATA
ACGGATGATATCGGTAACAAGCAATTATTAAAAGATCAAGATGCTGTCAA
ACAGGATAAGAATATCCTGCACACCCAATATGTACATAAAGAAGATGCAG
AGTGGTCAAGCAGAGGGAAAAGGAGCTATCAAAGATGAAAGACAAGTTAG
AGTCCAACCAAAAATATTCAGATGTATTGAAGAAGAACCGACAGGTAAAG
AATTTGGACGAGGAAGTCATATCACCAAATAAAAAGAAAAAAAAAAGAAA
GAAGAAAAATAATCCGAACCCTATAGTCAACAATGTATCGCAAGATTCAG
ATGCAAATAATAATTCCAGCCATGCCATTAACTTGACTTGCAAGTCACAA
GCAAATCTTCAGCTGTGTAAAAAACACGACGTCTCACAAATGATCATAAC
GGATGATATCGGTAACAAGCAATTATTAAAAGATCAAGATGCTGTCAAAC
AGGATAAGAATATCCTGCACACCCAATATGTACATAAAGAAGATGCAGAG
TGTTTACAACCAATCTCCAATGAAGAATGGAAGATGGACGATGGGAAAGG
AGCAGCGTACCATGCCTGTAAATGGTTCAATATGATCCTGATCGTCGTTT
CAACTGTCATGTTGGTGTTTTGTTTCATTCTGCACCAGGACCAATTCGTT
TTCGAAAAAATAACCACTTCTGAATATGGTACTGAGGACCAGTTAAATGG
AATATTTCTCGACCATTCATAATTTACAACCAATCTCCAATGAAGAATGG
AAGATGGACGATGGGAAAGGAGCAGCGTACCATGCCTGTAAATGGTTCAA
TATGATCCTGATCGTCGTTTCAACTGTCATGTTGGTGTTTTGTTTCATTC
TGCACCAGGACCAATTCGTTTTCGAAAAAATAACCACTTCTGAATATGGT
ACTGAGGACCAGTTAAATGGAATATTTCTCGACCATTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:626125..629386 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-696:220 |
| Aaloc | 79-474:1206 |
| Aaloc | 1-78:3263 |
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