|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:527960..531101- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003166 ID=XLOC_003166|Name=XLOC_003166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3142bp|location=Sequence derived from alignment at sc0000179_pilon:527960..531101- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATCTCTAAGAAAGTGGGTAAGTTTGTTGGAGTATATAAACTTTT
ATATAAAAGGGCGTGGCCTCGATGCTAATTAGGGAAATTCCCTTTTTTAG
GATTCAAAACACAAAAATTGCAAAGTTTGGCAAAGTTTGGCTAGTTCTCA
GATCCCTCGTTGAATTTGGATCAATTTCTAAACACCTCATCTTATGACCG
GGGAATTTCCCTAATTAGCATCGAGGCCACGCCCTTTTTGTCAATGAATT
TTGTCCACAATTATAATCATTGACATGTCCGGTCATAAGATCAGGTGTTT
AGAAATTGATCCAAATTCAACGAGAGGACTGAGAACTAGCCAAACTTTGC
AATTTTCGTGTTTTGAATCCTAAAAAAGGGAATTTCCCTAATTAGCATCG
AGGCCACGCCCTTTTTGTCAATAAATTTTGTCCACGATTAATCATTGACA
TATCCGGTCATAAGATCAGGTGTTTAGAAATTGATTCAAATTCAACGAGG
GGACTGAGAACTAGCCAGACTTTGCCAAACTTTGCAATTTTTGTGTTTTG
AATCCTAAATAAGGGAATTTCCCTAATTAGCATCGAGGCCACGCCCTTTT
TGTCAATAAATTTTGTCCACAATTAATCATTGACATGTCCGGTCATAAGA
TCAGGTGTTTAGAAATTGATCCAAATTCAACGAGGGATCTGAGAACTAGC
CAAACTTTGCCAAACTTTTCAATTTTCGTGTTTTGAGTCCTAAATAAGGG
AATTTCCCTAATTAGCATCGAGGCCACGCCCTTTTTGTCAATAAATTTTG
TCCACGATTAATCATTGACATGTCCGGTCATGGTAAGATCAGGTGTTTAG
GAATTGATTTAACCTCAACGAGGGGACTGAGAACTAGCCAAAGTATGCAA
TGGGCTGGAAATTTGAATCCTAAAAAGAGGAATTTCCCTAATTAGCGTCA
AGGCCACGCCCATTTTTATATCAATTTTTGTCAAGAACTGCTCTATGTTA
TGTAATCTTTCAAGATCTTTTGGTTTGAAGTCAATATCTTTTTTCAATTT
TTTTTTACAAAGCTTTTTAGGGGCTTTTTACGAATCCTGAATCCGAATCC
GAATCCTTGAATCCCAATCCTACAATCCAGCGAATCTACCCTTCTTTTCT
TGAGGAAATATGTTCTAAAGATGGTCAATTCTTTCAAACAGAAGATGAGA
TTGAATTCTCAATGAATCATTTTCTAAGGTCTAAGATTTATAACAGTTGA
CACAGGGACAATTAATGTTTCCTTTTTTTTTGGAATCAGCAAAGTTCAAA
GTATACTCGTGTTACATACATTATGTCCCTAAATGCAATAAATTCGGCGC
AAAAAAAAACTGAGGGACTGCATGACGTCATAAAACTTAAAACCTTAAAG
GTTTTGTTTTGAAGTACAATTCAACATTTTTTTAAAAGATCCAGTAGATT
TTTTATGAGGCTCACATTTGTTCTTATCCTGTTCTGAGGTATTCAAGGAT
TTATACCTAATTTTTACAAATTTGACCCCTAAATTGCTTGAAATTGAGTA
ATTTCAGGCTCAGCATCGTTCTTAAACAGTTCTTATTTTTGAGCAATTTT
TAGCCTCATTGTTCTTATAAAAGGAAAAAGTGTGTAAATATGAAATTTGG
TCCTTTGACAGGTATTCGGGATCCCTAATTTTCGAAAAAAAATGACGAAG
ACAGCAGAAATCGAACATTTTGCTAAAATTTCTTGAAAGAATGCAAGAAA
ATAATTAACAGTGATTTTTGAATTTCTACATCCTAATACGCTTTTTTTGA
AATGTAAATGACCAAAGACCCTCAGCTTTCTGCGCCAAACTTATGTTCTT
TTTGGGATATGTGATAAGTAAACCAAAGTAAAAAGTTTTTCATCCTTTTT
TGAGAATTCCCTCTTAAAAATCATAGCGTATGAAATATTTTTACAGCAGT
AGCCAACTTATGAACATTAAATTGTTGAGATACGAAAAAAGTAAGAGTTA
GTACACTTGTGAAATACTTCAATTGCGACCCATACAACTTGTTTTAGTCA
GTTTTTTTTCAACCTTATTCTTCATCACTTTGTTCAGTTTTTCCATTTAA
TTGTTCGTCACAACATTCTATATTAACTGTTCTCCTTTTTTCCTTGCTAG
TTTTCATCGGAAATCCAGGCGTTGGAAAAAGCACTTTGCTAAATTGTTTA
CTGGGGCGGAGCGCATTCAAGAGTGGCGTTAACATCGCCACTGGAATTTC
ATACCAATTGCAAACAGAAGCTGATGAAGTGAGGGGCGTCACTTTTTGTG
ACACGCCCGGTCTAAAAGATGTGGCAATGCGAAACAAAGCAGCTATTGCA
ATCACCGAGGCGTTGAAACAAGGTGGAGAGTTTCTCGTTACGTTTACCAT
CACTTTGGAAGCCGGAAGAGTCAAACCAGAAGATATTTCCACCATCGAAG
CGGTTGTCAAGGCAGCCCCTGAAATTAGGGACTTTGGTTTAGTGATCAAT
AAACTGTCGAAGAATCTTTACAATCGTCTCTCATCGAACGCTTCTCAAAA
AGAAAGTGTCATCAAAGAGGTCACAAAATCCTTGACATGCAATCAACCCT
CTGTTCTCCTTCTACAAAACAACGATAATCTTGAAGGTGAAGAAAACGCT
CACACCAATTTACCATCTTTGTCTGATTTTGTGTTCCGTACCATGAAATC
TATCGTTATTCACACAAACAATGTGCAAGATGTGAACGCTGGTCAACAAT
ACAATGTCGCTTATCAAAGGGAAATGGCAGCTAAAATGAAGGCTGAAAAA
CAAGAAACCGAGCGCCTTAGAAAAGAGAGAGAAGAGGAGGCTAGGAGACA
GGCTAGACAGCGTCAAGAAGCGGAGGATAGAAGGAGACGACAAGAGGCTG
AACGACAACAACGCGAATGGGAATATGAACAACAACGGAGGAGGGAGCGT
GAACGAGAACAAGAAAGATTACAACGTGAAAGAGAGGCTAGGCAAGCAGC
AGAACAAAGAAGGCGTCAAGAGGAGATAGAAAGAGAAAAAGTGAGACAAC
GACAGGAAGAAGAAAGGCGTCAACGCCAACTAACATACCAACGCCAGCAA
GCAGCCGCCCGCGCACGTGATGACGGCTGTATTATATTGTAG Coding sequence (CDS) from alignment at sc0000179_pilon:527960..531101- >XLOC_003166 ID=XLOC_003166|Name=XLOC_003166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2028bp|location=Sequence derived from alignment at sc0000179_pilon:527960..531101- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATCTCTAAGAAAGTGGATGGCAATCTCTAAGAAAGTGGTTTTCA
TCGGAAATCCAGGCGTTGGAAAAAGCACTTTGCTAAATTGTTTACTGGGG
CGGAGCGCATTCAAGAGTGGCGTTAACATCGCCACTGGAATTTCATACCA
ATTGCAAACAGAAGCTGATGAAGTGAGGGGCGTCACTTTTTGTGACACGC
CCGGTCTAAAAGATGTGGCAATGCGAAACAAAGCAGCTATTGCAATCACC
GAGGCGTTGAAACAAGGTGGAGAGTTTCTCGTTACGTTTACCATCACTTT
GGAAGCCGGAAGAGTCAAACCAGAAGATATTTCCACCATCGAAGCGGTTG
TCAAGGCAGCCCCTGAAATTAGGGACTTTGGTTTAGTGATCAATAAACTG
TCGAAGAATCTTTACAATCGTCTCTCATCGAACGCTTCTCAAAAAGAAAG
TGTCATCAAAGAGGTCACAAAATCCTTGACATGCAATCAACCCTCTGTTC
TCCTTCTACAAAACAACGATAATCTTGAAGGTGAAGAAAACGCTCACACC
AATTTACCATCTTTGTCTGATTTTGTGTTCCGTACCATGAAATCTATCGT
TATTCACACAAACAATGTGCAAGATGTGAACGCTGGTCAACAATACAATG
TCGCTTATCAAAGGGAAATGGCAGCTAAAATGAAGGCTGAAAAACAAGAA
ACCGAGCGCCTTAGAAAAGAGAGAGAAGAGGAGGCTAGGAGACAGGCTAG
ACAGCGTCAAGAAGCGGAGGATAGAAGGAGACGACAAGAGGCTGAACGAC
AACAACGCGAATGGGAATATGAACAACAACGGAGGAGGGAGCGTGAACGA
GAACAAGAAAGATTACAACGTGAAAGAGAGGCTAGGCAAGCAGCAGAACA
AAGAAGGCGTCAAGAGGAGATAGAAAGAGAAAAAGTGAGACAACGACAGG
AAGAAGAAAGGCGTCAACGCCAACTAACATACCAACGCCAGCAAGCAGCC
GCCCGCGCACGTGATGACGGCTGTATTATATTGTAGTTTTCATCGGAAAT
CCAGGCGTTGGAAAAAGCACTTTGCTAAATTGTTTACTGGGGCGGAGCGC
ATTCAAGAGTGGCGTTAACATCGCCACTGGAATTTCATACCAATTGCAAA
CAGAAGCTGATGAAGTGAGGGGCGTCACTTTTTGTGACACGCCCGGTCTA
AAAGATGTGGCAATGCGAAACAAAGCAGCTATTGCAATCACCGAGGCGTT
GAAACAAGGTGGAGAGTTTCTCGTTACGTTTACCATCACTTTGGAAGCCG
GAAGAGTCAAACCAGAAGATATTTCCACCATCGAAGCGGTTGTCAAGGCA
GCCCCTGAAATTAGGGACTTTGGTTTAGTGATCAATAAACTGTCGAAGAA
TCTTTACAATCGTCTCTCATCGAACGCTTCTCAAAAAGAAAGTGTCATCA
AAGAGGTCACAAAATCCTTGACATGCAATCAACCCTCTGTTCTCCTTCTA
CAAAACAACGATAATCTTGAAGGTGAAGAAAACGCTCACACCAATTTACC
ATCTTTGTCTGATTTTGTGTTCCGTACCATGAAATCTATCGTTATTCACA
CAAACAATGTGCAAGATGTGAACGCTGGTCAACAATACAATGTCGCTTAT
CAAAGGGAAATGGCAGCTAAAATGAAGGCTGAAAAACAAGAAACCGAGCG
CCTTAGAAAAGAGAGAGAAGAGGAGGCTAGGAGACAGGCTAGACAGCGTC
AAGAAGCGGAGGATAGAAGGAGACGACAAGAGGCTGAACGACAACAACGC
GAATGGGAATATGAACAACAACGGAGGAGGGAGCGTGAACGAGAACAAGA
AAGATTACAACGTGAAAGAGAGGCTAGGCAAGCAGCAGAACAAAGAAGGC
GTCAAGAGGAGATAGAAAGAGAAAAAGTGAGACAACGACAGGAAGAAGAA
AGGCGTCAACGCCAACTAACATACCAACGCCAGCAAGCAGCCGCCCGCGC
ACGTGATGACGGCTGTATTATATTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:527960..531101 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 25-1014:991 |
| Aaloc | 1-21:3143 |
|
