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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:609636..614094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003162 ID=XLOC_003162|Name=XLOC_003162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4459bp|location=Sequence derived from alignment at sc0000179_pilon:609636..614094- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGA
CAAGATTGAAAGTGGTCAAATAGAGCAGATAATTGAGATGAAAGTAAAAG
AAAAAGTCAAATATAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGC
AAAACTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGA
GCAAACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGG
AAATTAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGAT
TCTTCTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGA
AGGTCAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAA
TATTGGTAACTGTAGGTACGTATATGCTAAATTCTACTTTCCTCACCCTA
AGTTTTGTTTTCTTTTTTTCTTCACCCCTGTACCCTAGTGACCAGGTGAA
AATCTCAACCCCAGTCAAAATCGCATTGATTAGGGTAAGCCAGTCAAAAT
AAAAACATGCTAGTGAATCATAAACCAGACACTCAAATGCTTTTTGTAAC
GAAAAGTCTTTCTCTACCCCGGTGAAAAAATCAAGTTAAAACTTCTCCCC
CAGTCAGTCTCAAATTCAAGGCCGGTAATATTCATATTCATATTTTTAAT
TAGCCAACCCAGTACCGTGTTATTGAGACAGAAGTGTTTTCTTGCATGCC
CCTTTCTTCAACAGTTCTTATTTTTGGTTTTGAAAGTCCAATTTTACTGT
TAAATTAGATCTCGAGAAAGTATTCAACCCTGATCGACCTGAAATTATAA
TGTCTTATAAATAACTATCATCTTAGGAACTGGAACATTTGGTCGCGTTT
TTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAGAAAACAACT
GAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATATCATACGTCT
TGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGA
ACCACCCATTCATCGTGCAATGGTGAGTTGGCATTACCTTTGTATGTTTT
ACTTGAGTAGTCTAAATCCCTAATTTGCCTAGAGATGAATCTTCAACCCT
TTCTCAAGCACGAAACAGTAAAGCCCTAAAGTTTGCCCTGTATTTGGAAT
ACATAACGGATTGAAACCAGCGCTTTCTTTGTTCTCGCCCGGCATATTTA
AAAAAATAAATCTAGCTATGGATCTTTCGATATGGCGTTTGTGTGAAAAC
CACGCGGCTCACGCATTTTGTGCTTTAAATTTTTTAGACTGTATCTTATC
GCGTCAATAAGACAAGAGTATTTTTAAAAATTTAGCACTAGTTGAAATTT
AAGAGAGAAGAGATTTTTGGTAAAGAAAACTGAAGGGCATTATTATACAA
ATTATCCGCCCCTCGATAGTTATTTCATATCTATAAAACGTATTATAAAC
GACTCTTGCTTGTCGAGATGGTAAGGCAGAGATTGAGTCTGGAACATATG
AAGACGCGACTTTTTTGTTTCAAATCACTCCATACGTTTTTCTTCTTTTT
TCAGTCATTTTACAGCTCGTGACGACAAGTGTTTATACATGTTATTCGAA
TACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGGACGTTT
CACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGCGTACTTG
GTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACCTGAGAAT
CTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTGGTTTTGC
TAAAGTTGTTGAAGATATGTAAGTGTACTATATTTCACAGATCTGATTAA
AGTTGTGATATCGTTATCTATCTCGTTCTATTAAAAACAAGCTCTATTGT
GTTTTGTGATGCAGAAAATATGAGGGTCTTACATATTCTTCATTGAACAA
CCTGCTGATCAATGATTATTGTATCGAGTTCTATGTGAAGTGCCTTGTAA
GCTCTTTTACACTGCTCCGATTTTAACGCACTGGTTCAGCAAGAACCGAG
CCACCAAGATAGTATCTATACACCCTCTTCTCACAGACTCGATGAGATTT
TATCAGCCAGTAAAAATAACGGTCTCAAACTCGATGGGGATTGATAGTCC
CATGTTTCTAATGGCTGGGGATTTGAATTCAATTGTTTTCTAGCCAAAAA
ATGAGTGAAAAGATAGTACAATACTTTGCTGTGGGGATTTGCTCATCTGA
TTTATTTTCAGTGGGTACAAAAATTAGAGTATAATTTTCCACTGGAGACA
ATATTTTCGACAATTTTTCCAGTGGGTCTTTAAGAAGGGGATGTACCTAT
CGTCTCTTTATCTTATCATGAGGTAACTTGCCTGAGATAAGGACCTAAAT
CTTGATTAAGCTATTTTCTACAAGTAGAAATGAAAGTTCTTCTTCTTCTT
TATTAGCACGTGGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAG
CAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGT
GTTCTTACATTCGAAATGTTGGCTGGGTAAGTAAACTGGGTACATTTTTA
TAAGAACAAACTATATAAGAACACAAGGCTCCTTAAAACAAGTTGAGAAC
ATTTTAGATTTTAGGGCCTTCTGGACTCTAAAAGACCCATTTTTTATTTC
TTGGACAAAAAAACTCAAAAATTGGTGAAAATAAGAACATGTTAAGAACA
TTTTTACGCTTAAAACCCGAAAAGTTAAGAACATCTGAAAGCTTCAAAAA
TTATGGATATTCTAATAAAAAGGCGTGTAACAATAACTGCTGTTTGGATT
CAAAGATCTTATTATATCACCTTCCACTAGTGTAGATCTGAGATCTCCTT
TCGAATTCAATTTTTTAGAATAGGACTGATTCCTATTGAAAGGAAAGTTT
GCTGAACATAACATAATCATATTTTTTTTGCAGGGAGGCACCCTTTGTTG
ATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGTCATCAAC
TGGCCTTTGTTTCTCAAGAACACCACTGAACAGTATAAATATATATATTC
TTTAAATTTAACAGAAAATCTTGATTTAAAATACCCAACCCAGTTTGTTC
GTAAATAGGAATTAAAAAGCGAAAAATACTCCTTGAAAGTTATTAGTGCG
TACAGCGTCCTTTGCGTTAACTTCCCTTACATATAGATACTTGCAATATC
AAAAAACGCAATAACTTTCATGGTTTATTAACCGTTCAAATGTACTGTGA
GATTTAAACCCTTATAAATTCAAGCTAAAAGAAAATTTGACGTATGCGAC
GCGGAGTGATATAGGCCTGAAAATTTTATCAAATTATGGACCTGACAAGC
CTCAAAATGAACAAGCAGTAGTATTTGTTAGATTTGGAAGTTGTTATGAA
CACAAAACACTTTGAATTTGTTTAGAGACTTCATCAAGCAACTAGTGGTG
GAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATTGGTATGTATCTAAAT
TCTTTAAGTAGCAATAAATAGCAATATTACCACACCCCTGTCTCAGTGAG
CAAATCTTTCAGTAAGCTGGGATTAAATAAAGATCTTAATGTTGTCAATG
GTGTGAAAAGAAACAAAGAAAAAGATGATAAATGCAGGAAAGGGGTCAGT
GAAATTAATCGCAAAACCTTTTGGGGATATCTTCAAAATAGGTAAAAATC
CAGGGAAATTTGACCTTCCAAAAATGACCTCTTGAATATATACTATATAT
TATATTCTAAGAATAAGACTTCTTTGGAAGCAAGACAGGGATGCTTTGGA
AGCAAGACATTGATGTTCTTTACTTTCTTTACTTACAGGAAGGTGCAGAA
GAAGTCAAAAATCATCCATGGTTTGATGACGTCATCTGGAAAGATGTAGA
AAACAGACGGACAAAGGTAAGCGCTGAATGTCTATTGATCACTATAATAA
GTTTTTATATAAGGGTTTAAAATCTAGCAAATGGCTATATTCAGACATCA
TAAAAAAGGCTGAAAATTTGGACGATCGATAAAAATATATTATTTTAAGA
CTACGAAAGAAGTTCTTTCCCATGTTACATATTTGATATATTAACGTGTC
CAGGAAAAGATATAGGCTTAGGCTAAAATAAAATCATATAGTTGTTGATT
TTGTTTTGGCTTTTGAACAAAATTACTTACATTTTCTTTGGAATCATTCT
TCTTGTTTTTTTTTTCAGCCACCAATTATTCCAAAATTGGCCTTCAATAG
TGACACCAGTAATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCAG
GACCAGATATCCCACAAAACATCAAACATAAATTCAAAAACTGGCACTAT
GAAGAATAA Coding sequence (CDS) from alignment at sc0000179_pilon:609636..614094- >XLOC_003162 ID=XLOC_003162|Name=XLOC_003162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000179_pilon:609636..614094- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGA
CAAGATTGAAAGTGGTCAAATAGAGCAGATAATTGAGATGAAAGTAAAAG
AAAAAGTCAAATATAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGC
AAAACTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGA
GCAAACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGG
AAATTAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGAT
TCTTCTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGA
AGGTCAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAA
TATTGGTAACTGTAGATGAGCGATTCTCGGGTCAATGAAAACCTAAACGA
ACATGAAAATGAAGACAAGATTGAAAGTGGTCAAATAGAGCAGATAATTG
AGATGAAAGTAAAAGAAAAAGTCAAATATAAGCGAAGTAGCAATGCTTTA
TTAGTGAATGATAGCAAAACTGGTGATCTATCTCCCGGTTTATTGGATGA
TGAGGAAAAAGTTGAGCAAACAAAGATTGGTTCAATGAAAATAACTGCAA
ACGAAAATTGCAAGGAAATTAAAGATTCATCTTCAATAGGAATTTCTCTT
GGCAGCACCGATGATTCTTCTATTTGTGAAAACAATGACACTTCATGTCA
TCCAAAATCAACTGAAGGTCAGCTTACCCCAGTGACGAAACATTTTCATC
TCAAAGACTTGGAAATATTGGTAACTGTAGGAACTGGAACATTTGGTCGC
GTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAGAAAAC
AACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATATCATAC
GTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGGAGCTT
GTGAACCACCCATTCATCGTGCAATGGAACTGGAACATTTGGTCGCGTTT
TTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAGAAAACAACT
GAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATATCATACGTCT
TGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGA
ACCACCCATTCATCGTGCAATGTCATTTTACAGCTCGTGACGACAAGTGT
TTATACATGTTATTCGAATACGTGGCCGGTGGTGAATTGTTCACTTATCT
CCGTAATAAAGGACGTTTCACACCTGAAGATACCAAGTTTTACATTAGTG
AGATAATAAGCGTACTTGGTTACTTGCACGAAATGAGTATTGCTTACCGA
GATCTGAAACCTGAGAATCTACTCCTTGACCATGAAGGACATTTGAAATT
CACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATTCATTTTACAGCTC
GTGACGACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAA
TTGTTCACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAA
GTTTTACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGA
GTATTGCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAA
GGACATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATAT
CACGTGGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGC
TTGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTT
ACATTCGAAATGTTGGCTGGCACGTGGACGTTATGCGGTACACCAGAATA
TCTGTCACCAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGATT
GGTGGGCCCTTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGGCACCC
TTTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGT
CATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAGGAGGCACCCT
TTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGTC
ATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAAGACTTCATCAA
GCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATTGA
GACTTCATCAAGCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACG
TAAAGGATTGGAAGGTGCAGAAGAAGTCAAAAATCATCCATGGTTTGATG
ACGTCATCTGGAAAGATGTAGAAAACAGACGGACAAAGGAAGGTGCAGAA
GAAGTCAAAAATCATCCATGGTTTGATGACGTCATCTGGAAAGATGTAGA
AAACAGACGGACAAAGCCACCAATTATTCCAAAATTGGCCTTCAATAGTG
ACACCAGTAATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGA
CCAGATATCCCACAAAACATCAAACATAAATTCAAAAACTGGCACTATGA
AGAATAACCACCAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTA
ATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATC
CCACAAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:609636..614094 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1234-1374:142 |
| Aaloc | 1156-1233:522 |
| Aaloc | 1096-1155:934 |
| Aaloc | 997-1092:1426 |
| Aaloc | 877-993:1953 |
| Aaloc | 613-873:2855 |
| Aaloc | 418-609:3582 |
| Aaloc | 1-414:4460 |
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