XLOC_002861 (mRNA) -

Overview
NameXLOC_002861
Unique NameXLOC_002861
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000490_pilon:65219..66113+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002861 ID=XLOC_002861|Name=XLOC_002861|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=895bp|location=Sequence derived from alignment at sc0000490_pilon:65219..66113+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGTCGTGGAAATGGGGCCGACTGTGCAATCTTTGGTTGTAGTAC ATGTCGAAAACACGGTCTTTCATTGTTCCGGCTCCCCACTGCAAAAAATG ATCGATTTGCTCAATGGAGATCCGATATGATTAATTCGATTACAAAAGAC AGGGTTGCTGATGCGGTTTTTAAgaacaaagttgaaaaaaacaCAATCTT CATCTGTGAAAAACATTTCAGAGAAGAAGATATGTATCATTGTAAGTATA GATGAATAAATCTACAAATATTAATGAAGTTATGATGCAACATATAATGT CTTGGTTGGTCTAACAATATCTAAGTACGATAAATAATCCAAAAGTATGA AAATTCATACAAGTGCATGATCAGTTTTAGGTTTCACCTTTAATACCTAA GATAAATATTATaaaagtatttcaatttttcccTCAGATCCTTCACGAAA AGAGCTCAGAGCTGAAGCTTATCCTCTACCAACCCAAAATCTCCCTCAAA AGTCACTACCCATAGCAGACACACCACAGCGATCAACGACATCAATACAG AAACGAGATCAGTACCAGCAGTCCAATGATCAGGGTAGTATTGTTGATAA GAAATATAAAAACTTCCAAGATTTTGTCAAAAGAGCTGACAAATTGAAGC TCCCTCGTGGCTGGAAAATTACCCATCATGAACAGCTGACTGAAGTCGTC AAGGAGGATGAAAGTCTATCCATACCGGCCTTCCAAATATTCATCAACAG TAACACAGACTTGAGCATCAATCTACGTTGCTATGGCTGGTTGCTGCCAA AGGAATCACCAATTATGAAAGAAATTGATTCCTTAAATGACATTTACTTG TCCGATTATATTCAAGTTTTGGAAAGCTATCATCTTTGTAAAggt

Coding sequence (CDS) from alignment at sc0000490_pilon:65219..66113+

>XLOC_002861 ID=XLOC_002861|Name=XLOC_002861|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000490_pilon:65219..66113+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGGTCGTGGAAATGGGGCCGACTGTGCAATCTTTGGTTGTAGTAC
ATGTCGAAAACACGGTCTTTCATTGTTCCGGCTCCCCACTGCAAAAAATG
ATCGATTTGCTCAATGGAGATCCGATATGATTAATTCGATTACAAAAGAC
AGGGTTGCTGATGCGGTTTTTAAgaacaaagttgaaaaaaacaCAATCTT
CATCTGTGAAAAACATTTCAGAGAAGAAGATATGTATCATTATGCCTGGT
CGTGGAAATGGGGCCGACTGTGCAATCTTTGGTTGTAGTACATGTCGAAA
ACACGGTCTTTCATTGTTCCGGCTCCCCACTGCAAAAAATGATCGATTTG
CTCAATGGAGATCCGATATGATTAATTCGATTACAAAAGACAGGGTTGCT
GATGCGGTTTTTAAgaacaaagttgaaaaaaacaCAATCTTCATCTGTGA
AAAACATTTCAGAGAAGAAGATATGTATCATTATCCTTCACGAAAAGAGC
TCAGAGCTGAAGCTTATCCTCTACCAACCCAAAATCTCCCTCAAAAGTCA
CTACCCATAGCAGACACACCACAGCGATCAACGACATCAATACAGAAACG
AGATCAGTACCAGCAGTCCAATGATCAGGGTAGTATTGTTGATAAGAAAT
ATAAAAACTTCCAAGATTTTGTCAAAAGAGCTGACAAATTGAAGCTCCCT
CGTGGCTGGAAAATTACCCATCATGAACAGCTGACTGAAGTCGTCAAGGA
GGATGAAAGTCTATCCATACCGGCCTTCCAAATATTCATCAACAGTAACA
CAGACTTGAGCATCAATCTACGTTGCTATGGCTGGTTGCTGCCAAAGGAA
TCACCAATTATGAAAGAAATTGATTCCTTAAATGACATTTACTTGTCCGA
TTATATTCAAGTTTTGGAAAGCTATCATCTTTGTAAAggtATCCTTCACG
AAAAGAGCTCAGAGCTGAAGCTTATCCTCTACCAACCCAAAATCTCCCTC
AAAAGTCACTACCCATAGCAGACACACCACAGCGATCAACGACATCAATA
CAGAAACGAGATCAGTACCAGCAGTCCAATGATCAGGGTAGTATTGTTGA
TAAGAAATATAAAAACTTCCAAGATTTTGTCAAAAGAGCTGACAAATTGA
AGCTCCCTCGTGGCTGGAAAATTACCCATCATGAACAGCTGACTGAAGTC
GTCAAGGAGGATGAAAGTCTATCCATACCGGCCTTCCAAATATTCATCAA
CAGTAACACAGACTTGAGCATCAATCTACGTTGCTATGGCTGGTTGCTGC
CAAAGGAATCACCAATTATGAAAGAAATTGATTCCTTAAATGACATTTAC
TTGTCCGATTATATTCAAGTTTTGGAAAGCTATCATCTTTGTAAAggt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_002861XLOC_002861-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000490_pilongenomesc0000490_pilon:65219..66113 +
Properties
Property NameValue
Aaloc244-699:440
Aaloc1-240:1