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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000221_pilon:578625..581982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002772 ID=XLOC_002772|Name=XLOC_002772|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3358bp|location=Sequence derived from alignment at sc0000221_pilon:578625..581982- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGATGA
CGGTTTGATTTAAACTTTTGTCACTTTTGTTAAAGGTTTCTTTTCTTGTG
CCTGAAGAGTTTTCTAGAAAAATTGGTAACTGGACTATTGGTAAATGAAC
CATTAAAAATATTTTAGATTTGTTTTTTTTTTTCAACGTAAGATAAGAGC
TTATTTTGATTTTCTTATAAAAAGAATTGATTCGTAAAACATGAGCTTTA
CTAGTTATATGAAATGAATATCTGGATAAGCAATGCAATCCTTAACATTA
AAACTTACGTCTATTTTCAGTCTTAATTGTGAGCTCTTATAAAAGAGACC
AACAGAATCCTGCGTCACAGCAAACCACTACATCATTGACATCTGCAACA
CCAGCAACATCATCTACCATAACAACTATCACCACTTCGATCCCTAAAAC
AATAACAATTACACTTGGGTCTTCTTTAAAGGCACCTTCAAGTGCAACAA
ATACACTACCTGGGCCGTCGGGCCTTTCCCATCCTCCATTTAGACCAGTG
CAAGTTTTTGCAGGGCCATCAAGTATACGCAGTGGTTTGATGTCTTTCAA
TCCTGGATCATCTGCCTCTTCCCCTAAGTCATCTTTCTTAATCAACTCTA
TCCGAATGGGACCACCCTATCCATCAGGCATCAGAAATCGTATTCCTGTT
CGACCCCCTGTTCAAAAGTTCCAACCTGGTCCAGCTAGGCCGTTGAGCTT
CAGACACAGATTCTTCAATCCTCGTAAATCAATTTCTTCATCTTTAATTG
TTGATTTCTTGCATTAATTTCTTCTGTAGTTTTTTATTATTTTACAGCAA
GATTGGAAACACATTTTTGCTAATTATTTTTTGTCAACTCAGGTCAACTG
TATTTGATTATTTATCAGGAGTTGTTCAAACTTTTCTATTATTTTCTCGA
TAGAGGAAACATCGCAACCATACGTGTCAACAATTGATTTATTGGATACT
GACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGGTAAGTT
TAGAAAAATTAATTAAGTGCAATATTGGCTCTTTTTTTATAATTTTGAAG
TTCTTTAAAACAAAATTTGAAACCAGCTTTATAAGATGTGAAAATGGCTC
TATTGTCTTAAATTTATGTATTGATTCTTTCATTACTTTACTAAAAGAGG
ATGACAATGCAAGTACATCATCAAACACTAATGATGCACCGCCTGAATCA
ACTCAAAGTAAAAAATCCACTCTTATTGACTCAAGTAAAAAAGCTTCACC
AGATCAAAAGACCAAGAGTTCCGGAATGAGATCGTCAGCATCGTCAAAAA
GTAAGTATAGGAGCAAAGAAATGTCATAAAAGATTACTCAATACATAACC
TTTGTTATTTCACAGGATTAAAGAATTATTTGCTTTTCTTCTAGTAATCG
AACCAATCATCATCGAGGATTCCCCACCGAGCAGCCCTTCTTACAGCCCA
GAATGCAGTCCACCCCACACCAGTGAAGATCAAGTCAAACCTACACAAAA
TAAGAAAGGTGTGGTATTTTCAACAGCCTAATTCTTCTCAGCCGTTTGAT
TGGTATTATTGTAACAATACAACAAATCAACCTTTTACGTATGACAATTC
AAAAATCATTTTAATCAGATGTTTACACCATAAATTATTTTTTAAACAAA
AATTCATTCGCTTTTATTATTTTGCAGTGAAAGTGGGCATGGGAATTACA
TATGGAGCTCAAGCTGAACCACAAGTTGATGCCATCAGTAAAGAAACAGA
AAGGTAAGATCTATATACTTTAATGGGATCGATTTTCCCAAAATCTAATT
CCAATGGAAATTTGGAAAGGTCTTATCCGGGAAATTCTTTAGAACAAAAC
TAAAACAATGTCCGATAATAATTACTTTTAAAATGTTCACGGGCGTCACA
TAGAATGCAACCCCCCCCTGGCTCTTAGGGGGGGCTAGAACCTAAAGTTC
TGGCTGGGGGCTCTTTTTCCCTAAGATCAGGGGGGGGCTACTTACTCAGG
GGGGCTATTTGTTTACGTCTGTCGACTGGGGGCTAACCTAACAACTTTTT
CCAAGAACTAAGAAATTTTTCTTTGTACATTTTAGTATTTTGTTTGTGTA
ATAATGAAGTCGTACTATTGACGTTTGTTGATTAGAATTTCAAAAGAAGA
CATTATACATTTGGTATCTCTTTAAGAGTTCAGATTTTTAAGCATAAATT
AATTTTTTTTTTGTATTTTGGTAGGGGGCTGTCTATTTCGAATTTTGGTG
GGGGCTAAATCTCAGGGGGGGGCTGAACCTTCAGGGGGGGGGGCTTCAAC
CCCTCTGCACTCTATGCGTCAAAGAAACGCTAATAATGTGTATTTCAACA
ACCAGTATGTATAATTTGGCAGTATAAAGACACAAAATTATGAAGATTTG
TCTTCTGATAATGCCATCCATGCAATAAAGTTTCCTCCATATCTTAAAAT
TTTGCGGATGAGCTCAACGAAAATTTATCCCATTAATAATTGGCTACTTT
GGATGACTTGCTCAAACAATGACAAAATTATTTTTAAATGAATTTATATT
TTAATTTCATCTCATTTTTTAAGGATGCTTCAAAATTTGCTACCAAGTGA
AGAAAGTGGTGAAAATGATGAAGAACTATCAAATCTACTTAAAAGTAAGA
AACTTTAATAATGCACTTTGACATCCTTACCGATTTTTTAATTGCCGATT
TTAAACAACACAAATTAATGAGGTTTTTCATACTGTTTTGAGTGATATAT
TCTATTCAACCATGTATATTTGATTTTTTAGCTGGTATGAATATGATTGA
TCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGTGAG
CTTTTGTTATTATTTTCAAGCTTATTAAACTCACTACATTCGTGATGAAT
CGTTCATGCAAGGCATACTTTTTAAGAATTTTGAAATATTTCTCTTTCTT
TTTCAGACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAAC
ATGGCAATATACCAAGAGTGCTTTCCTTTTTATGTAAGGGTCTTATTTCA
TCAGCAAAGTAATTGTATCGATGTGGTCTTATGTTGTTTTCCTATTAATA
TGTAGCTCATTTTTTGACATGAGAAGAAAAAGTTTAACCTTTTTTATTTG
AAAATATTGTTCAAGCTTTGGCTATTATATGTTACCCTTTTTATTTTTTC
ACTCTAGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGG
AAAAACTCCCTTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTT
TACTTTTA Coding sequence (CDS) from alignment at sc0000221_pilon:578625..581982- >XLOC_002772 ID=XLOC_002772|Name=XLOC_002772|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0000221_pilon:578625..581982- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGATGA
CGATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGAT
GACGTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCGTC
ACAGCAAACCACTACATCATTGACATCTGCAACACCAGCAACATCATCTA
CCATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTT
GGGTCTTCTTTAAAGGCACCTTCAAGTGCAACAAATACACTACCTGGGCC
GTCGGGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGC
CATCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCC
TCTTCCCCTAAGTCATCTTTCTTAATCAACTCTATCCGAATGGGACCACC
CTATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAA
AGTTCCAACCTGGTCCAGCTAGGCCGTTGAGCTTCAGACACAGATTCTTC
AATCCTCTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGC
GTCACAGCAAACCACTACATCATTGACATCTGCAACACCAGCAACATCAT
CTACCATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACA
CTTGGGTCTTCTTTAAAGGCACCTTCAAGTGCAACAAATACACTACCTGG
GCCGTCGGGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAG
GGCCATCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCT
GCCTCTTCCCCTAAGTCATCTTTCTTAATCAACTCTATCCGAATGGGACC
ACCCTATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTC
AAAAGTTCCAACCTGGTCCAGCTAGGCCGTTGAGCTTCAGACACAGATTC
TTCAATCCTCAGGAAACATCGCAACCATACGTGTCAACAATTGATTTATT
GGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTG
AGGAAACATCGCAACCATACGTGTCAACAATTGATTTATTGGATACTGAC
TCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGAGGATGACAA
TGCAAGTACATCATCAAACACTAATGATGCACCGCCTGAATCAACTCAAA
GTAAAAAATCCACTCTTATTGACTCAAGTAAAAAAGCTTCACCAGATCAA
AAGACCAAGAGTTCCGGAATGAGATCGTCAGCATCGTCAAAAAAGGATGA
CAATGCAAGTACATCATCAAACACTAATGATGCACCGCCTGAATCAACTC
AAAGTAAAAAATCCACTCTTATTGACTCAAGTAAAAAAGCTTCACCAGAT
CAAAAGACCAAGAGTTCCGGAATGAGATCGTCAGCATCGTCAAAAATAAT
CGAACCAATCATCATCGAGGATTCCCCACCGAGCAGCCCTTCTTACAGCC
CAGAATGCAGTCCACCCCACACCAGTGAAGATCAAGTCAAACCTACACAA
AATAAGAAAGTAATCGAACCAATCATCATCGAGGATTCCCCACCGAGCAG
CCCTTCTTACAGCCCAGAATGCAGTCCACCCCACACCAGTGAAGATCAAG
TCAAACCTACACAAAATAAGAAAGTGAAAGTGGGCATGGGAATTACATAT
GGAGCTCAAGCTGAACCACAAGTTGATGCCATCAGTAAAGAAACAGAAAG
TGAAAGTGGGCATGGGAATTACATATGGAGCTCAAGCTGAACCACAAGTT
GATGCCATCAGTAAAGAAACAGAAAGGATGCTTCAAAATTTGCTACCAAG
TGAAGAAAGTGGTGAAAATGATGAAGAACTATCAAATCTACTTAAAAGAT
GCTTCAAAATTTGCTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAAC
TATCAAATCTACTTAAAACTGGTATGAATATGATTGATCCAGAAGATTTG
CTTCAAAAGATGAAGCAATTACCAAATGATAACTGGTATGAATATGATTG
ATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAACCA
AAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACATGGCAATAT
ACCAAGAGTGCTTTCCTTTTTATACCAAAACGTTTGTACATCAAGGGGTT
GTATTCGCAAGCAAAACATGGCAATATACCAAGAGTGCTTTCCTTTTTAT
ATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAAACT
CCCTTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACTTTT
AATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAAAC
TCCCTTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACTTT
TA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000221_pilon | genome | sc0000221_pilon:578625..581982 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1153-1251:100 |
| Aaloc | 1075-1149:352 |
| Aaloc | 1012-1071:526 |
| Aaloc | 940-1008:735 |
| Aaloc | 865-936:1630 |
| Aaloc | 751-861:1913 |
| Aaloc | 598-747:2160 |
| Aaloc | 508-594:2404 |
| Aaloc | 55-504:3037 |
| Aaloc | 1-51:3359 |
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