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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000221_pilon:562753..566098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002746 ID=XLOC_002746|Name=XLOC_002746|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3346bp|location=Sequence derived from alignment at sc0000221_pilon:562753..566098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGAAGAAGCACTGTATTGTTCTTACCATTGGTATTCTGCACCAT
GATTGGTGGAATCTTTGGTGGTGGGTTGAGGCCTGGGTCCGATGAACATC
ACAAAGCATTCCTTGGTAAACTGAAAGATGAATATGATCATTTATCCGTT
GAAGAGTCCGTTCGTAGATTGAGGTAAACTCGCTTATTTCTCGAATAGTA
TGTAACGTAATTGAGAACTCTTGGAGTTTTTAAGAAACAAGCGGTGTCTC
ATTTATCCAGTGAGAGGTTTTTAACACCTTCTCATAGACTCACTGGGAAC
CCTTTTCCCACTGGaagaattggccaaaatattttcctCAGTGGAAAATC
ATACTatgatttttatccccactgaaaataatcagataagcaaatcccca
ctgcaaaatattgtgctatcttttccatccccactgaatcttctggctag
aaaacaatggaattcaaaccaccagccataaaaaacataggaatatcaat
ccccatcgagttttggtccgttatttttacgcccactggctgataaattc
ccaccgggtctgtgagaaggggctgtTTTTTAGCTTGTGTGTAGTGAGGA
AAACCTGAATGAGCTAAATCGAAAGAGGGTTTGGCTATCGCCTGtttttt
tGAAAGGATACTGATTTCGAATTCTACTGCTTTGATCTTGACAAATTGAT
TGGAAATTAGGTTTACCTTCGCCTGTATATCCTTTCTTACATAGAACGAG
TATTTAGTAATTGTTTTTCCAGATAGTGGATACCACTGGGTCTGTTATAT
AGATTCgtgacaatagaccttttcataaattacttaatgaacatcacttg
cctcgttttgaaatgatTGTAATGGTGGATTACTCCCAGCGAATTTTATC
ataactactttctattcataaaaaaatcatttgccTCATATAAATCTATC
atatgtctcaagggacataatcaccatggcaattgtttgaatacgaggca
agtgatgttcgtgacgtaattgaTGAAAATAACTATCTTTACTGAGAGTG
TCTGGTATTCGATCGAAATTTAGTGTATGCATAGAACCAGTGACAAGCTA
ATCCAACGGATAAATTTGGTACATATTCTCAACCTAAATCTACATATACT
CTCAATTTCAGGTTACTCGCTCCACACATTGATATGAATAAAGATGGTTT
CATATCTTCCAAAGAATTACAAATCTGGGTTCGTGATAAATACACTTCTA
TCTTGGACTCAGAGGACATCGACTTCAAATTTCGTGAATTGGACATTCAT
TTTGATAACAGTTTAACATGGGATGAATACACTGAAAGATATTATGGTTT
GAACAATACAGGTGAACTATACTTGTAAATTACGCACAACAATCAGTAAA
TCTGGCTTACGCaggctgtttttattttttcattatttcaaacTTAATGT
TCCTTATATTCTTACAGTCAGTTATTTCTGGAATCTTATGCCGAATTTGT
TCTCATTTTGAGCCACATGTCCTTATAAAGAAGCGTAGAACCTTTCTACT
AATATTGTCTTCTCACTCGAATATTTTGACAGTCACAATCAAGTTATCGG
CGAATCTCTATCAATAAGTCGACAAAATTAGACTCTAGTGATAAAATGCA
AGATATTTAGTAAATGTAATCATTTATAGCGAGTGACGGACTTTCAAAGG
AAATAAAGgagaattttaaagaatatttggCGCGTGATCAACGACGCTGG
AAATATGCAGATATAGATGAGGATGGGGCGCTAAATCTAGAAGAATTCCA
CATGTTTTCGAAGCCAACAAAATATGCAGAAATGGTGGATGTGGTTGCAT
ACGTAAGCGTGTATTGCATAATAAAGGCCTCCGAAGCAGAATTCTCGAAT
TTATACGGGACAAAATTTACTGTTCCTTCTTATCATTGTTTAGGTCGAGT
GAGAAGAATATATGTTGAGCGTCTTTTGATGTCTAATGAGTGATATAGCC
TAAGCTCTGTTGAAGTCGTTTCTATAACACGAcccccccGCAAGTTTCCA
CAAGTTATATTTTAAAGAAAGTCCGACTGTGGTAACCTGAAGTATTAGAT
GCCATTGTTATAAACAACTCCAAATTACATCCTAAAACATATCCTAAGTT
CGGTATAGGGTGTGTCCAATAGTTTGCACCTTCAGATAATTTGATATGAC
TATTGAGTATTAATCATCTTTATCTGTTGTTCAGGAGGAAATTGAACATT
ATGATATCAACAAAGACGGTTTCCTTTCCTTGGAAGAATACCTCAGTGAG
TACAAAATAAATAATTCTTACCGCAGGGAGCGTATTATTTTATTGTTATT
GCCCATTTATCGCATTTTGATACAACTCGGATCAGCAAGTAAAGCAAAAT
GAGATAGAAACATGATTTAGTATGCGGCAACTGAAGCGGCGACTGAGCTA
TAAAGATATTCGATAATCACCTTTTTTCTTCGTTTCAGAAGCAATAGCTA
TGCCAGCCATGCGACCATTGGACGAAAAGAAATTCCATGAAGAATATGAC
TTAGATAAAGATGGAAGGCTGAACAAGGTAGAGTCGTAAATGGGCTTAGA
ATTCACAAATTATTGATATGTCTATCACCATAGAAAATTTGGCAGttttt
tttGCAGCCctggtcaaaaatatttctaaaatccTTTCTACAATTGAACT
AACTACGTGTGTGTGGCTGTGAGGTATGGTATGTAAGATGCCATGGATAG
TGTGGTCTCTACTATCGATCATTATTTTTATCACATCTCTTTCACCAGGA
TGAAGTAAAATTATGGAAGACACCAAAATTTTTCGATCAAGCAGAATTAG
AAGCCAAAGAATTGATTCGTATTGCAGATGATGATCAAGTATTTATTTTA
CTTCCATTTCTGGCTGGAGTTCTTTTGGATTTCTTGACCAATCTTGATCT
CTAACATTTATGTTTCTGCTAAGCCATGAGACACAAATTATTCGACAAAA
ATggtcattttcaaaatcaaagttGGCGTTAAGGGAGGGCTTCAATTTCC
AAAATACATAGTCCATGTAggatatatttgaaaaattcagcATTGACAAA
ATTTCAAGCTTGTCACAAGGAAACTGGTTGTGATTATTTTAGCGCATTTA
GCGCATTTGTTGATAACACTTTCCGTCATAAATTTCAAACCCCCCAGATT
CAACACTGAAATGTATCCGTCTTACCTTTGAATCTCTCTTTTTGAAGGAT
GGTAAATTGACAGTGAAGGAGATAGTTCATAACCATTTCGTCTTTGTGGG
AAGTAAAGCCACCATTTCTGGAACAATGCTACATGATGAATTCTGA Coding sequence (CDS) from alignment at sc0000221_pilon:562753..566098+ >XLOC_002746 ID=XLOC_002746|Name=XLOC_002746|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000221_pilon:562753..566098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGAAGAAGCACTGTATTGTTCTTACCATTGGTATTCTGCACCAT
GATTGGTGGAATCTTTGGTGGTGGGTTGAGGCCTGGGTCCGATGAACATC
ACAAAGCATTCCTTGGTAAACTGAAAGATGAATATGATCATTTATCCGTT
GAAGAGTCCGTTCGTAGATTGAGATGTATCGAAGAAGCACTGTATTGTTC
TTACCATTGGTATTCTGCACCATGATTGGTGGAATCTTTGGTGGTGGGTT
GAGGCCTGGGTCCGATGAACATCACAAAGCATTCCTTGGTAAACTGAAAG
ATGAATATGATCATTTATCCGTTGAAGAGTCCGTTCGTAGATTGAGGTTA
CTCGCTCCACACATTGATATGAATAAAGATGGTTTCATATCTTCCAAAGA
ATTACAAATCTGGGTTCGTGATAAATACACTTCTATCTTGGACTCAGAGG
ACATCGACTTCAAATTTCGTGAATTGGACATTCATTTTGATAACAGTTTA
ACATGGGATGAATACACTGAAAGATATTATGGTTTGAACAATACAGGTTA
CTCGCTCCACACATTGATATGAATAAAGATGGTTTCATATCTTCCAAAGA
ATTACAAATCTGGGTTCGTGATAAATACACTTCTATCTTGGACTCAGAGG
ACATCGACTTCAAATTTCGTGAATTGGACATTCATTTTGATAACAGTTTA
ACATGGGATGAATACACTGAAAGATATTATGGTTTGAACAATACAGCGAG
TGACGGACTTTCAAAGGAAATAAAGgagaattttaaagaatatttggCGC
GTGATCAACGACGCTGGAAATATGCAGATATAGATGAGGATGGGGCGCTA
AATCTAGAAGAATTCCACATGTTTTCGAAGCCAACAAAATATGCAGAAAT
GGTGGATGTGGTTGCATACCGAGTGACGGACTTTCAAAGGAAATAAAGga
gaattttaaagaatatttggCGCGTGATCAACGACGCTGGAAATATGCAG
ATATAGATGAGGATGGGGCGCTAAATCTAGAAGAATTCCACATGTTTTCG
AAGCCAACAAAATATGCAGAAATGGTGGATGTGGTTGCATACGAGGAAAT
TGAACATTATGATATCAACAAAGACGGTTTCCTTTCCTTGGAAGAATACC
TCAGAGGAAATTGAACATTATGATATCAACAAAGACGGTTTCCTTTCCTT
GGAAGAATACCTCAAAGCAATAGCTATGCCAGCCATGCGACCATTGGACG
AAAAGAAATTCCATGAAGAATATGACTTAGATAAAGATGGAAGGCTGAAC
AAGAAGCAATAGCTATGCCAGCCATGCGACCATTGGACGAAAAGAAATTC
CATGAAGAATATGACTTAGATAAAGATGGAAGGCTGAACAAGGATGAAGT
AAAATTATGGAAGACACCAAAATTTTTCGATCAAGCAGAATTAGAAGCCA
AAGAATTGATTCGTATTGCAGATGATGATCAAGATGAAGTAAAATTATGG
AAGACACCAAAATTTTTCGATCAAGCAGAATTAGAAGCCAAAGAATTGAT
TCGTATTGCAGATGATGATCAAGATGGTAAATTGACAGTGAAGGAGATAG
TTCATAACCATTTCGTCTTTGTGGGAAGTAAAGCCACCATTTCTGGAACA
ATGCTACATGATGAATTCTGAGATGGTAAATTGACAGTGAAGGAGATAGT
TCATAACCATTTCGTCTTTGTGGGAAGTAAAGCCACCATTTCTGGAACAA
TGCTACATGATGAATTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000221_pilon | genome | sc0000221_pilon:562753..566098 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 787-885:3248 |
| Aaloc | 697-786:2799 |
| Aaloc | 610-696:2491 |
| Aaloc | 547-606:2235 |
| Aaloc | 376-546:1682 |
| Aaloc | 175-372:1163 |
| Aaloc | 1-171:1 |
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