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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000221_pilon:468939..472317+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002743 ID=XLOC_002743|Name=XLOC_002743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3379bp|location=Sequence derived from alignment at sc0000221_pilon:468939..472317+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAATTTATTGTCAGGTCGTCTTTTGGACACTCCTTGCGTGGTTTG
CGGTGATAATTCGTCCGGTAAACATTACGGTGTTTACGCTTGTGATGGCT
GCAGTGGATTCTTCAAAAGAAGCATTCGCAAAAACAAGTAAGAAACGTTC
CGCCTACAGTTATGTTTAGTCACTGTCTCAATGTTATCAAGTTTGATTGT
AATATTGAGCAAGGTTGTGATAGCTTCGCCAAAACTAGGGAAGAATAATG
GATTTAGCTATTTTGCACCCGAACCGAAGGCGTTCAGAAAGTTTTTCCTC
GTTTTAGTGCGAAAACTGCATCTTTTACTCTaggtaaacaaaaacaaaaa
gaatccTGGAATTACTGTAGTATTCTGCAGTAGTGAATGTTACTTTGAAC
TTTCCCtttttttGCTATCAGAAATTACTTTTAACTATTGTACTATGATT
TTACGACAGCAATTGGGGGtttgtttgagattttttgttgACGTCTGGCG
CATCCATACATTCACTGAATTCGACTAAATAGCTCAAAGGAACTTGTAGA
AGATATcattcatctgtcgtccagtcccAAATAAACAAACCATTATATGT
CTCGCATCTGTCTTTTGCCGTTCTAAGAAATCCGAAAAACCAGCAATAAC
GCCTCGTTTTGGTAAAAGTTAAAGATCTTTCCTTTTGTTAACACATCTGT
CATTAGTCTCTCCAAAAGTCAAGGAAATTGATGATTGAGaacaaaattct
aaaataatttttatttatttttcatagaaaatacACTTGTCGTCAATCAC
AACATAATATCGATTTAAATAACAACGAGGGCGGAAATAAACCTGTTTTC
CGATCGTGCCCTATCGATAAAATTCATCGAAATCAATGTCGATTTTGTCG
ATTACAAAAATGTCTGGAAGTTAACATGAATAAAGatggtaggatttttt
ttaaccttcttattggttttctttattttgttattgttccGCTCAATATT
ATCTTTCCACCTTCATTTACTGAAATGATATGGCTAtaacatcttttgaa
gaaaCGCTATTCATCATCTATTCGTTATTTCGaacttttattttgtattg
tCGATTTATTGTTTTTCCCAGCTGTCCAGCACGAGCGAGGTCCAAGAAAC
TCTACCTTACGTAAACAAAGACAAGACAAACTATTGGCCCATCACCATCT
TCACCAACAGCAACCTGCTCCTCGACCAATCAGATACGAGGAAATTGCTG
TCGTGTCCAGCCCTCCTTTGAGAAGAAGCCCAAAAAATGatagttttgaa
gattttatggATATGGTTTTATATGCAACTGAGAAATGTTTAACTCCAGA
TTATGAAGAGGTTTGTCATTCCGTTCTTTGTTCGTTACTTTTCCAATCAA
ATCTTTTTAGTTCCTTCGTTTGCCGACTGCTCCATTCTCACCCAAAATTT
AGATCGATAGTCCAGGCAATATGGGGCATGAGGTACCACCTTGACGgtga
aaaaggtttgaaaatgtttttgggttAAAACATATCTATATTTTGAGAAT
CGCGATGGTTTTCAGGCTAACCAGGGGGCAATAACTTTTCAGAGGGGGTG
TTTCGAGGGTACGTGGCAATCGTTTTTGGAGCCGATTTGCCTGGGGTAGG
GTACTGCATTTCAAGATATCTCATGAACTACATATCAAAACCTATTAAAA
CTTTGCAGGGTTTTAGAGGCCTACTATTTACTTATGTTAAacaagttttc
attatttttcttcgACAGAACCGTCACCTATCAATGACAGAGGTGACAGC
TAAACTATTATTCAAAATCATCCAATGGACCAAGAAATTACCTCCTTTCG
CTTCTCTTTACTACGTTGACCAGGTGAGAATctcaaattcaattttgacT
TCGGTCTCTTTTTAACAGAAGAATTCAttatatgcaccactgcaatgtct
tccacggacccaaaagctgattggttcaaagtgacgtattgactgatttt
acgtcacttacaaccaatcagctgttgggtccgtgatattatgtcagaag
acattgcaatggtacatatcatgaatatgctTCTGTCAAACTCCCACAGC
TTGATCCtccattatttaaaaaaaaaaattctaattcttGTCTCTTGAGA
AAGTTACTATTGAGTCTTTGACAAATATTGGCGCTTTTGAAGTACGAGAC
TAACATGCATTTATATTTACGTTACATCTGTGTGTTTggtcattgacttc
caagcccgaagggctagactcgagactcctggatgggaaatgaagcctcT
TATTTCCTATCCAGAACGCCCACGCGTACTTgttacacaaacgccagatt
gaaaataaaatctatcgctagatttcaaaaaatgtagtcctcaaaaacaa
aggaaccactagatacaatccgccgtcatgattgcggcgcgttcggGATg
cgaaataagtggcttcactttttttgcctaTGGGAAAGATTAGAGATTCT
AAACTCAAACTGTTCGGTGTTTTCATACTTTGAACACTCATTTTGAATAG
ATTATACTGATGCAAGAATCATGGAGCTCGTTATTCCTCATTGCTGCCGT
ACAATGGAGAATAGTATCAGATGACTGGCTTCTAGACTACTTGCGAGATT
ACGAAGATCGTTTCAGTGAACGCGAAGTGCGCATGCTCAGATATATTGCT
GATCTATTGGCTGATTTGGACCAATTAGACTTGGATGAACGTGAAATGGC
TTGTTTGTTATTCATAGGTTTATTTAATCCATGTAAGTAATTTTGTTAGA
TCCCTATCTGTGTTTGCACATTTAGATGGGTGCAATTATGCCAACCAATG
CATTTTCATTCCCCCCATTATCAGTAACTTCAGCATGATGGACCCATTTT
GAGAAATTATCAACCACGATTCCCGAATGAACCGCCTATGGGTGCTATCA
AATGTTGCATGGGTCGCAGCGCTCCTAGGTCCTTACCAGCGGTATCCAGT
TAGAAATTAGTGTGATGGAACGGCAAACATTCCTCTGGATCGGCTGATAA
CATTCACCATAACTTTATTTGTAAAAGATTACCCAgttttccaattttcg
aaagtcgaataattattttcttttttctgcaTTTTAGACATCAGTGCGTT
GACAGAACCAGGAGCTGTCGAATCATGGCGTGATCAATGCCAAATGTCTT
TGAATGATTATTTAACACGTGATCCAACGTTGAACCCTGGACGTTTCGGA
CGAATGTTGTTAATTTTTGGACGCTTACAACGCGTGGATCCGAGGCTGAT
TGAAGATGTTTTCTTCAGGAAAGAAATTGGTGATATGCATATGGAGACTT
TGGTTCGGAATATCTTTCATAGAACCTGA Coding sequence (CDS) from alignment at sc0000221_pilon:468939..472317+ >XLOC_002743 ID=XLOC_002743|Name=XLOC_002743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000221_pilon:468939..472317+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAATTTATTGTCAGGTCGTCTTTTGGACACTCCTTGCGTGGTTTG
CGGTGATAATTCGTCCGGTAAACATTACGGTGTTTACGCTTGTGATGGCT
GCAGTGGATTCTTCAAAAGAAGCATTCGCAAAAACAAATGAACAATTTAT
TGTCAGGTCGTCTTTTGGACACTCCTTGCGTGGTTTGCGGTGATAATTCG
TCCGGTAAACATTACGGTGTTTACGCTTGTGATGGCTGCAGTGGATTCTT
CAAAAGAAGCATTCGCAAAAACAAaaaatacACTTGTCGTCAATCACAAC
ATAATATCGATTTAAATAACAACGAGGGCGGAAATAAACCTGTTTTCCGA
TCGTGCCCTATCGATAAAATTCATCGAAATCAATGTCGATTTTGTCGATT
ACAAAAATGTCTGGAAGTTAACATGAATAAAGatgaaaatacACTTGTCG
TCAATCACAACATAATATCGATTTAAATAACAACGAGGGCGGAAATAAAC
CTGTTTTCCGATCGTGCCCTATCGATAAAATTCATCGAAATCAATGTCGA
TTTTGTCGATTACAAAAATGTCTGGAAGTTAACATGAATAAAGatgCTGT
CCAGCACGAGCGAGGTCCAAGAAACTCTACCTTACGTAAACAAAGACAAG
ACAAACTATTGGCCCATCACCATCTTCACCAACAGCAACCTGCTCCTCGA
CCAATCAGATACGAGGAAATTGCTGTCGTGTCCAGCCCTCCTTTGAGAAG
AAGCCCAAAAAATGatagttttgaagattttatggATATGGTTTTATATG
CAACTGAGAAATGTTTAACTCCAGATTATGAAGAGCTGTCCAGCACGAGC
GAGGTCCAAGAAACTCTACCTTACGTAAACAAAGACAAGACAAACTATTG
GCCCATCACCATCTTCACCAACAGCAACCTGCTCCTCGACCAATCAGATA
CGAGGAAATTGCTGTCGTGTCCAGCCCTCCTTTGAGAAGAAGCCCAAAAA
ATGatagttttgaagattttatggATATGGTTTTATATGCAACTGAGAAA
TGTTTAACTCCAGATTATGAAGAGAACCGTCACCTATCAATGACAGAGGT
GACAGCTAAACTATTATTCAAAATCATCCAATGGACCAAGAAATTACCTC
CTTTCGCTTCTCTTTACTACGTTGACCAGAACCGTCACCTATCAATGACA
GAGGTGACAGCTAAACTATTATTCAAAATCATCCAATGGACCAAGAAATT
ACCTCCTTTCGCTTCTCTTTACTACGTTGACCAGATTATACTGATGCAAG
AATCATGGAGCTCGTTATTCCTCATTGCTGCCGTACAATGGAGAATAGTA
TCAGATGACTGGCTTCTAGACTACTTGCGAGATTACGAAGATCGTTTCAG
TGAACGCGAAGTGCGCATGCTCAGATATATTGCTGATCTATTGGCTGATT
TGGACCAATTAGACTTGGATGAACGTGAAATGGCTTGTTTGTTATTCATA
GGTTTATTTAATCCATATTATACTGATGCAAGAATCATGGAGCTCGTTAT
TCCTCATTGCTGCCGTACAATGGAGAATAGTATCAGATGACTGGCTTCTA
GACTACTTGCGAGATTACGAAGATCGTTTCAGTGAACGCGAAGTGCGCAT
GCTCAGATATATTGCTGATCTATTGGCTGATTTGGACCAATTAGACTTGG
ATGAACGTGAAATGGCTTGTTTGTTATTCATAGGTTTATTTAATCCATAC
ATCAGTGCGTTGACAGAACCAGGAGCTGTCGAATCATGGCGTGATCAATG
CCAAATGTCTTTGAATGATTATTTAACACGTGATCCAACGTTGAACCCTG
GACGTTTCGGACGAATGTTGTTAATTTTTGGACGCTTACAACGCGTGGAT
CCGAGGCTGATTGAAGATGTTTTCTTCAGGAAAGAAATTGGTGATATGCA
TATGGAGACTTTGGTTCGGAATATCTTTCATAGAACCTGAACATCAGTGC
GTTGACAGAACCAGGAGCTGTCGAATCATGGCGTGATCAATGCCAAATGT
CTTTGAATGATTATTTAACACGTGATCCAACGTTGAACCCTGGACGTTTC
GGACGAATGTTGTTAATTTTTGGACGCTTACAACGCGTGGATCCGAGGCT
GATTGAAGATGTTTTCTTCAGGAAAGAAATTGGTGATATGCATATGGAGA
CTTTGGTTCGGAATATCTTTCATAGAACCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000221_pilon | genome | sc0000221_pilon:468939..472317 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 877-1116:3140 |
| Aaloc | 643-873:2551 |
| Aaloc | 538-642:1769 |
| Aaloc | 301-537:1124 |
| Aaloc | 139-297:779 |
| Aaloc | 1-135:1 |
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