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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:66528..70547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002640 ID=XLOC_002640|Name=XLOC_002640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4020bp|location=Sequence derived from alignment at sc0000058_pilon:66528..70547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCAAGCAGAACAAAGTTTTTCTCCATTTCTTGGAGCTGAAGATAT
TAACGAGAATCCGTACTCAAATCTAGATGAGCTGAAGAGGGAAGTATTTA
ATCTGCAACAACAACAAAGCTCTCCGAGTCAAAACAAAGATCATATCCAT
TTTGAAGGACAAAATGAAAATCAAGGTAGCGATATCTCTTCTAGTCCATC
AGGTAGCCGTAAACGAAAAGGTTTCACGAACGCACCCTCGGGTACATCAA
ACACAGATTCGGCCAGTATTAGCGATGGCATTGTCAGTAGACAACTAAAT
AAATCGAGAGACGGATCGACACCCGTCAAATCACCGAGGTTAACTCAAAG
ACATCCTTCTGTTACGCCTTTGAAGGCAATGGAAAACAGCATCGTGAAAT
GGGCTAAAGAAGAGAAGGAACTGGTGGGCTTGAAAGAGACTTTATTGAAC
AATACGGTGGACTTTGGAGATTATTCAATACTGATGTATGAGACACAAGA
TGCATTCAACCATTGCAGGAATCTTCGATTACAGTTGCAGATCGCTGAGC
AACAGGTAAGGCCGAATAAATCCTTATCAAGGGGAAATCAGTCGGTTTGC
AGCATTTGGGCTGTGAATACCTCGTATTGTTTCCCCTTTTTGACACAACA
AACTGTCCTGCCCCTTCCCTCAAGTCAAACTCTGGATGAAAATTTGAAAA
GTTCCATAAAGTGCATAACAGTATCAAAGTATCGTAAACAGATTAGAAAG
TTAAGTGTCCCATTAAGAAATCAAGGTAGCGTACATCCATTTTTCCATGC
AGAAAGCTGGTCAAAACTTGGTCTGGAAGCCTGAAAGCTATATCAAGAAG
AGTATAAGTGGTATAAAAAATTCTCAGTCAAGAACTTTAATCAAGTGATC
GAAATGAATAGATTAAAAATCTTGATTACAAATCTCAAAAGAAGTCGACG
TCCCTCAGTCCAGACCAGGTTCTTTACTAAATTGACATTAAAGTCAAACA
GTCCTACTCCAATATTTGATAAATCTTGTAATATTCCTCAGACTGGTAGT
CGAACCCAGCTCATTTCTTAAAGACAGCAATACGGTAAAATTATCATAAA
CGGTTCTAATCAATGACCCTAAACATCAATCACCTAGGTCCGTTTGAAAA
CAAAACAATGTAGCGCACTGATGGAGCAACGAGCGCAATTAAAGCGGATA
GCTATCGACCAAAAGCGCATCAATGATACACAATCAAGCACGCTAGAAGA
AAAGTTAAGAAAAACCGAACAAAAAATGATCGATATTTATGGAGAAAATG
AATGGCTGCATGGTATGTCTTCATCCTTATATCATATTATATTATCCCTG
GGACTAAACGGGACAGAATCCAAGAGGCCCCCATCAAGAGACAATACTTC
TACCACAACTATCAAAAATATTTCTCTCAGTCCACCGAAAACAATAAAGA
AAAAAATATCCCTGAGGGACTTTCTTTCGGATCAAAGATTCACAAAAGAG
CATCAAACAGCATCAAACAGGGTTTGCTTTAAACTAGGCTGCTGACATCC
ATTAACAGATTCGTGCTCCTTATAAAAACAATCTGCGGGTTTGTAGAGGT
CTGTGATTCAGACAAGCTTCGAACAGTTTTAACGGATAAATGTGTGTGTT
ATACCTTTTTTTCTACAGGTAAATACGAAGAGATGAAGATGCTCTGTATC
AAATACCGTGACAGATATTTGACAGCAAGCCAACATGAACGCATCGATTA
CGCATTGAACGAAACGAGAGATCGAGTTCACCTCGATGGAAGCGACGATG
ATGATGGTAGTGAAGTCAGAGGTGGAGTGACAAGTGTCCTTTCTGAAGGT
ATGTTTGTAGAGTCCTTATTTCTTACGTAGACAGCCTAAATATTTAAGAC
TCTCCGAAATTTCTTACACAACTGTTCATGATTTTTCACACGATTGTTTA
CGATTTTTCACACGATTGTTTTTGTATATTTCTTTAAAAAAACTAGTTGC
TTGTATAAGTTTGTTGTTTGTTCATGTTGTGTTGTTTCAAAGGATAAATC
AATGGGTGCGGTTAGCGTTTTTACGACCTCAACTGATAAGAATGGATATT
CGTATTCGTTAATATTTTTCTTCTAGCTGAAAAGTGAAAGAAAGCACTTT
GCTACATTGCTCGTCTTTTTTCGGCGTTCGTGACAAGTTACTTAGCCATT
TAAAACCTCTATAAGAAGATGTCTTGATTTCTTTACACTTTCAGATAGTG
AAAAACGTCAACCACATTTCAATACACCCGAAAAATTTCCGCCTCCGCCA
TCGCCCATTCCTAAAGAGCAAACATTTATGCCGATGGAAAGGAATGGCCA
GAGAGGAGTTGAACCGGAAAAAATCCAAGGCAAGCGTGCAATAGATCCAG
AACAGACGTTTTTCGTTCCCGGTCATGATTTCCCACCACCACCTGGAGGA
TTTGGCAACTATACTGGAATGAATGAGCGTAGACATTGTAAGATAATCAA
CTTGAATTTTTCATCATATTTTAGCATATCTTTTCAAAGATCCGGTAAAA
CCTGTGCAACTGAAAAAGGCATTTGTCAAAAGTGAAACATATAGAATAAT
TTGCCATTGAATTTGAATATTCGGAAATCGTCTTATCGATTAAAATTTCA
ATGAAATGTATAAAAACTACAAACTTTTCATGAACTTAAGTTAGCTAATA
CAAACAATCCTGACGTAATAGGTTTTCATTTCCACTCAATTATCAAGTTC
GAAGAGTCATTGTTTGAATATATCCTTATTCCAGTTGACGAGAGACCAAG
AAAAGGTCAATTCAAAGCTGAATCGCCTTTGAGAGATGTTCCGATAGATG
ATCTGGGGATACAGAGGACAATCCGTGAAATCAAAACAATCGCAGCACGA
AATGATCATAAGCTGCTCGCACTGAGTGAAAAATGTCAAAGTGCATTCAC
TGGCCATACTGAAAAGGTGAGCTTGACCGTAGATGATGATTTAAAATACA
GTTGAGTCTCTTTAACTCGAATTTCTATAGCTCATACCTTATAAACCTTA
CTCCATAACTCGAAATTTTCCTTAACTCGGACAGATTTGCGTTCCCAGTG
TATGTTCGAGCTATGGAGACTCCACTGTAGTATAGGCCGGAAACCCACCT
ATCCCTTTACTGCGGAAATTCCTGGTTCAGCAATAGTTTTCTCTTTAGGA
TGTCACGGAAAAAAAGAAAAAGGTTAGACAGTGTTTCCTGACTATTTATT
ATAGTATTCTAGTTATTATATTATTGCATTGTAGTTGCAGTATTTAAGCG
ATAAAAAATGACAAGTTTTACAAAACACTTTTCCTAGAAAGATGCCACTT
GATTTTAATTGCATATTTCTGTTGGAGATCCCACCACACTGATTTGTCAT
GCCAGTAATAAACTCAAAAACAAAACTCAAGAGGTCATTTAGACTACTGG
GCTGAAACAAATATCTCTAGCTCTTTAATCCTTACCATCTCAATCACTAT
ACAGGTTGCCAAGATTTGCAACGAAAGTCAAGTAGTAGCCGATAAACTTG
AACGCTGGATGGAAAACTACATGATCCTTAAGCGTCGAACCGAGGAAACA
TCCGAAATATACCAACGTGAATTAAAGAAGTCATGGAGCGCTGAAATAGA
ATATTCGAAACAAATCAAAGCGCTTTGCGAGACCATCAATGACATGTCTC
AAGAACTGGTCGATGGCAAACAAAATTTGGGATCTTATGAAAAACATTTT
GACAAAGTCACTAAAGTTGTAAAGGAGATGGAGGAGAAGATGGAAAATTT
GGTCCGCGTGTCTAGCTTTAAACAAACGATGAATGAATCCAAATTGAAAG
AGTTGAAGAACCACGTGACCCAGCTTAAAGAGATCCGATTGGACGGTAAA
AAGAAGAAAGGAACACCATCGACTGGTAACAAACGAACAACCAAAACATT
GTTCAACTTGAAAAGACGGTTGAGCGAAACAAACGAGAGTGGAAAGTCTC
CCGGAACTTCATTACCTTAA Coding sequence (CDS) from alignment at sc0000058_pilon:66528..70547- >XLOC_002640 ID=XLOC_002640|Name=XLOC_002640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3702bp|location=Sequence derived from alignment at sc0000058_pilon:66528..70547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCAAGCAGAACAAAGTTTTTCTCCATTTCTTGGAGCTGAAGATAT
TAACGAGAATCCGTACTCAAATCTAGATGAGCTGAAGAGGGAAGTATTTA
ATCTGCAACAACAACAAAGCTCTCCGAGTCAAAACAAAGATCATATCCAT
TTTGAAGGACAAAATGAAAATCAAGGTAGCGATATCTCTTCTAGTCCATC
AGGTAGCCGTAAACGAAAAGGTTTCACGAACGCACCCTCGGGTACATCAA
ACACAGATTCGGCCAGTATTAGCGATGGCATTGTCAGTAGACAACTAAAT
AAATCGAGAGACGGATCGACACCCGTCAAATCACCGAGGTTAACTCAAAG
ACATCCTTCTGTTACGCCTTTGAAGGCAATGGAAAACAGCATCGTGAAAT
GGGCTAAAGAAGAGAAGGAACTGGTGGGCTTGAAAGAGACTTTATTGAAC
AATACGGTGGACTTTGGAGATTATTCAATACTGATGTATGAGACACAAGA
TGCATTCAACCATTGCAGGAATCTTCGATTACAGTTGCAGATCGCTGAGC
AACAGATGATTCAAGCAGAACAAAGTTTTTCTCCATTTCTTGGAGCTGAA
GATATTAACGAGAATCCGTACTCAAATCTAGATGAGCTGAAGAGGGAAGT
ATTTAATCTGCAACAACAACAAAGCTCTCCGAGTCAAAACAAAGATCATA
TCCATTTTGAAGGACAAAATGAAAATCAAGGTAGCGATATCTCTTCTAGT
CCATCAGGTAGCCGTAAACGAAAAGGTTTCACGAACGCACCCTCGGGTAC
ATCAAACACAGATTCGGCCAGTATTAGCGATGGCATTGTCAGTAGACAAC
TAAATAAATCGAGAGACGGATCGACACCCGTCAAATCACCGAGGTTAACT
CAAAGACATCCTTCTGTTACGCCTTTGAAGGCAATGGAAAACAGCATCGT
GAAATGGGCTAAAGAAGAGAAGGAACTGGTGGGCTTGAAAGAGACTTTAT
TGAACAATACGGTGGACTTTGGAGATTATTCAATACTGATGTATGAGACA
CAAGATGCATTCAACCATTGCAGGAATCTTCGATTACAGTTGCAGATCGC
TGAGCAACAGGTCCGTTTGAAAACAAAACAATGTAGCGCACTGATGGAGC
AACGAGCGCAATTAAAGCGGATAGCTATCGACCAAAAGCGCATCAATGAT
ACACAATCAAGCACGCTAGAAGAAAAGTTAAGAAAAACCGAACAAAAAAT
GATCGATATTTATGGAGAAAATGAATGGCTGCATGGTCCGTTTGAAAACA
AAACAATGTAGCGCACTGATGGAGCAACGAGCGCAATTAAAGCGGATAGC
TATCGACCAAAAGCGCATCAATGATACACAATCAAGCACGCTAGAAGAAA
AGTTAAGAAAAACCGAACAAAAAATGATCGATATTTATGGAGAAAATGAA
TGGCTGCATGGTAAATACGAAGAGATGAAGATGCTCTGTATCAAATACCG
TGACAGATATTTGACAGCAAGCCAACATGAACGCATCGATTACGCATTGA
ACGAAACGAGAGATCGAGTTCACCTCGATGGAAGCGACGATGATGATGGT
AGTGAAGTCAGAGGTGGAGTGACAAGTGTCCTTTCTGAAGGTAAATACGA
AGAGATGAAGATGCTCTGTATCAAATACCGTGACAGATATTTGACAGCAA
GCCAACATGAACGCATCGATTACGCATTGAACGAAACGAGAGATCGAGTT
CACCTCGATGGAAGCGACGATGATGATGGTAGTGAAGTCAGAGGTGGAGT
GACAAGTGTCCTTTCTGAAGATAGTGAAAAACGTCAACCACATTTCAATA
CACCCGAAAAATTTCCGCCTCCGCCATCGCCCATTCCTAAAGAGCAAACA
TTTATGCCGATGGAAAGGAATGGCCAGAGAGGAGTTGAACCGGAAAAAAT
CCAAGGCAAGCGTGCAATAGATCCAGAACAGACGTTTTTCGTTCCCGGTC
ATGATTTCCCACCACCACCTGGAGGATTTGGCAACTATACTGGAATGAAT
GAGCGTAGACATTATAGTGAAAAACGTCAACCACATTTCAATACACCCGA
AAAATTTCCGCCTCCGCCATCGCCCATTCCTAAAGAGCAAACATTTATGC
CGATGGAAAGGAATGGCCAGAGAGGAGTTGAACCGGAAAAAATCCAAGGC
AAGCGTGCAATAGATCCAGAACAGACGTTTTTCGTTCCCGGTCATGATTT
CCCACCACCACCTGGAGGATTTGGCAACTATACTGGAATGAATGAGCGTA
GACATTTTGACGAGAGACCAAGAAAAGGTCAATTCAAAGCTGAATCGCCT
TTGAGAGATGTTCCGATAGATGATCTGGGGATACAGAGGACAATCCGTGA
AATCAAAACAATCGCAGCACGAAATGATCATAAGCTGCTCGCACTGAGTG
AAAAATGTCAAAGTGCATTCACTGGCCATACTGAAAAGTTGACGAGAGAC
CAAGAAAAGGTCAATTCAAAGCTGAATCGCCTTTGAGAGATGTTCCGATA
GATGATCTGGGGATACAGAGGACAATCCGTGAAATCAAAACAATCGCAGC
ACGAAATGATCATAAGCTGCTCGCACTGAGTGAAAAATGTCAAAGTGCAT
TCACTGGCCATACTGAAAAGGTTGCCAAGATTTGCAACGAAAGTCAAGTA
GTAGCCGATAAACTTGAACGCTGGATGGAAAACTACATGATCCTTAAGCG
TCGAACCGAGGAAACATCCGAAATATACCAACGTGAATTAAAGAAGTCAT
GGAGCGCTGAAATAGAATATTCGAAACAAATCAAAGCGCTTTGCGAGACC
ATCAATGACATGTCTCAAGAACTGGTCGATGGCAAACAAAATTTGGGATC
TTATGAAAAACATTTTGACAAAGTCACTAAAGTTGTAAAGGAGATGGAGG
AGAAGATGGAAAATTTGGTCCGCGTGTCTAGCTTTAAACAAACGATGAAT
GAATCCAAATTGAAAGAGTTGAAGAACCACGTGACCCAGCTTAAAGAGAT
CCGATTGGACGGTAAAAAGAAGAAAGGAACACCATCGACTGGTAACAAAC
GAACAACCAAAACATTGTTCAACTTGAAAAGACGGTTGAGCGAAACAAAC
GAGAGTGGAAAGTCTCCCGGAACTTCATTACCTTAAGTTGCCAAGATTTG
CAACGAAAGTCAAGTAGTAGCCGATAAACTTGAACGCTGGATGGAAAACT
ACATGATCCTTAAGCGTCGAACCGAGGAAACATCCGAAATATACCAACGT
GAATTAAAGAAGTCATGGAGCGCTGAAATAGAATATTCGAAACAAATCAA
AGCGCTTTGCGAGACCATCAATGACATGTCTCAAGAACTGGTCGATGGCA
AACAAAATTTGGGATCTTATGAAAAACATTTTGACAAAGTCACTAAAGTT
GTAAAGGAGATGGAGGAGAAGATGGAAAATTTGGTCCGCGTGTCTAGCTT
TAAACAAACGATGAATGAATCCAAATTGAAAGAGTTGAAGAACCACGTGA
CCCAGCTTAAAGAGATCCGATTGGACGGTAAAAAGAAGAAAGGAACACCA
TCGACTGGTAACAAACGAACAACCAAAACATTGTTCAACTTGAAAAGACG
GTTGAGCGAAACAAACGAGAGTGGAAAGTCTCCCGGAACTTCATTACCTT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:66528..70547 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1336-1851:517 |
| Aaloc | 1156-1335:1235 |
| Aaloc | 913-1152:1775 |
| Aaloc | 733-909:2351 |
| Aaloc | 556-729:2884 |
| Aaloc | 1-555:4021 |
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