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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000342_pilon:8789..11303+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002605 ID=XLOC_002605|Name=XLOC_002605|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2515bp|location=Sequence derived from alignment at sc0000342_pilon:8789..11303+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTGCATTGGTGTGACATGCGCAGTAAATGCGACTTGTTATCCTAC
AGGAGCATTCACATCAGAATGTCAATGTGATGATGGATTTGAAGGTGACG
GTGTCAACTTCTGTAAAGAACCCTCATTTAGTAAGTACCTTAAGACCCCA
CCTcgctcccactggaaaaatattagtcaaaatatcgtccccagtggaaa
attatactggGATTTTTATcctctgtaaaataatcaaataaacaaatcct
ctcTACTGGTCTGCTAGAAGGGATTGATTGGCTTTAAATCTGTTTCAGCG
TTATTAGGGCTTTTGGATAGGCTTTCGTATATTGATCTATATCACTTCTT
AGAGCAAAAATAAATGTTTCAAATACACTTCTATTATATGAAAAgccatt
tttccatccccatGGGTTATTTCGCTCGTTAATTTGATCTCATTCGCTGG
ATCATTGAAACAGAAATGGAGCATCTCCATGAATGCTTTTGTgtaataac
acccctgtgtcacagacccactgggacccccggtgggaaaataccctaca
atttcagtcCTGCTgggaaattcaatttcatttcatccccattcattAGA
AATTAAATGTataaaattgtactccaaaaccaccccactgaatttttcaa
ccttgaaacaatagaaatttctgTCCCCATCGAGATTTCCATAGTAATTC
CTATCCCAATGTGGACATTTCCattggggctgtgagacagggattcATAT
TTAAGAGGGATCTTCGTAAAACTTAATATAATACATAAATTTGGCCTAAA
ATAAGAGCAAGAACAATATCCATGCctcaaatttcagaaatattGAATAT
CAGGCAATAAGTGAACAAAGTGAACATatcaagaacaatttaagatcAAT
TAAGCtggaaaaatcatgaaaagaaaagaaatcccAATCTCAACTAAAAC
TCACTACCGGagactggttcttataaaaagcgtgaaatttatcatttttc
ttcgtAGAGCATTTGATGTTGATGTTCATCATATTGGCAGCTGGTCTTAT
ATTCCTGATTTCTATACTCAGTATAATTGTCAACTTACAAAGAAGTGTCA
TGAATGATAAAAAGTAAGTAAATCCTGAAAACCtgaaaacaaagtcaatc
tAAATCCATTATAACTAACTTTacagggggggtactagggttggagGATG
TCGGGTATTTACGGTCCGGAACTCTGAAAACCGAGATAATGAGActtaat
ttttgcgaaaaatttaCGACATAGATAGAGAAAAACGGCGAAAAAGTTAC
TCTTAGAGAGAGAAAATCTcctggattttttataagaataagttaagaac
atttttaggcttaaaacccaaaaagttaagaacatccaaaggcttcaaaa
atcttggatgctcttataaaaaaacaaaaacgtgtatttggCGTGGATAA
ACTCAATAATCTAGGGTTCCACGGCAGTTTATGAGCTGATGAACTGAGCA
TGGGAAAAGCGTGGATGCCAAAACCAGGAACCTCTGGTTCGTGGCACTGA
CACCTTTGAACGCACAGCTAGCGCATTAACTGtgcttttattttcaataa
tgtTTTAAACCTTGTTATCAATAAATTGTTAGGGTGACCAAAGTGCAGAA
CAAGAAGAAAGACCCTTTCAATATCAATTGGCATGCGTATTTTATTGAAT
GGCGTAATACAACTATAAGTGGGCGTAAACCTAAAGCAAGGTCAGTGAGT
TCATGGTTTTTACCAAAGTTTATATCTAACCATTAGTCGGGATCAGTAAA
TAAGATATATAAGTGTTCCGGATTTTTTCCGCATAAAAATATAGCAAAGT
TTAGAACTACTTGAGTCTTAGCTTCGCTGGCTCGCGAGGGCTGAGGGTTT
CCTGGTTACTTGAGTCTTTACCCCTTTAACTTTAAACCCAAGTGTATAGA
CGTTCAAAATTGAAAGGCTATAACTTCCggccacttgatttaaaagggca
tgaaaaagcTAAGAAACAGGGTCTTGATTTTTCAGAATATCACCAGAACT
ATACGAACAATTTCTAATAGACTGATATTCTCCTTTATTCTATAATGTTG
TTTTAGATCACCATTGAATTTGAATCCGGAGAATGAAGAGGGCGCGCTGG
GCGTAATACCCACTACAAGTTTTGAGTATGGACACGAAGAAAGGGCGGTT
GATGTTCCAGAAGCAAGACCAGATTCATGCATCGACATTACAGAGTCAGA
GGACGGGCTAACACCCGAAAGGAAATTTGGTCTTGATAACCCAGGTTTTG
ATGAAGTTGATGTCAAGGCTAAAACTGATATAAGCGAACCCAAAATTGAC
CTCAATAGCCCAAGTTCTGATGAACAATTGGTGGTTCGGGAACCGTATAC
ATCAAAAGATTCGTTTAAAGAGAATCGATCAAGCCCGAGGGTAATCAAAT
CGACGGGTGGCAAAAGTGATCAGAGCATAGTTCTAACCGGacataagaaa
attgaaaaatattaa Coding sequence (CDS) from alignment at sc0000342_pilon:8789..11303+ >XLOC_002605 ID=XLOC_002605|Name=XLOC_002605|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000342_pilon:8789..11303+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTGCATTGGTGTGACATGCGCAGTAAATGCGACTTGTTATCCTAC
AGGAGCATTCACATCAGAATGTCAATGTGATGATGGATTTGAAGGTGACG
GTGTCAACTTCTGTAAAGAACCCTCATTTAATGGCGTGCATTGGTGTGAC
ATGCGCAGTAAATGCGACTTGTTATCCTACAGGAGCATTCACATCAGAAT
GTCAATGTGATGATGGATTTGAAGGTGACGGTGTCAACTTCTGTAAAGAA
CCCTCATTTAAGCATTTGATGTTGATGTTCATCATATTGGCAGCTGGTCT
TATATTCCTGATTTCTATACTCAGTATAATTGTCAACTTACAAAGAAGTG
TCATGAATGATAAAAAAGCATTTGATGTTGATGTTCATCATATTGGCAGC
TGGTCTTATATTCCTGATTTCTATACTCAGTATAATTGTCAACTTACAAA
GAAGTGTCATGAATGATAAAAAGGTGACCAAAGTGCAGAACAAGAAGAAA
GACCCTTTCAATATCAATTGGCATGCGTATTTTATTGAATGGCGTAATAC
AACTATAAGTGGGCGTAAACCTAAAGCAAGGGTGACCAAAGTGCAGAACA
AGAAGAAAGACCCTTTCAATATCAATTGGCATGCGTATTTTATTGAATGG
CGTAATACAACTATAAGTGGGCGTAAACCTAAAGCAAGATCACCATTGAA
TTTGAATCCGGAGAATGAAGAGGGCGCGCTGGGCGTAATACCCACTACAA
GTTTTGAGTATGGACACGAAGAAAGGGCGGTTGATGTTCCAGAAGCAAGA
CCAGATTCATGCATCGACATTACAGAGTCAGAGGACGGGCTAACACCCGA
AAGGAAATTTGGTCTTGATAACCCAGGTTTTGATGAAGTTGATGTCAAGG
CTAAAACTGATATAAGCGAACCCAAAATTGACCTCAATAGCCCAAGTTCT
GATGAACAATTGGTGGTTCGGGAACCGTATACATCAAAAGATTCGTTTAA
AGAGAATCGATCAAGCCCGAGGGTAATCAAATCGACGGGTGGCAAAAGTG
ATCAGAGCATAGTTCTAACCGGacataagaaaattgaaaaatattaaATC
ACCATTGAATTTGAATCCGGAGAATGAAGAGGGCGCGCTGGGCGTAATAC
CCACTACAAGTTTTGAGTATGGACACGAAGAAAGGGCGGTTGATGTTCCA
GAAGCAAGACCAGATTCATGCATCGACATTACAGAGTCAGAGGACGGGCT
AACACCCGAAAGGAAATTTGGTCTTGATAACCCAGGTTTTGATGAAGTTG
ATGTCAAGGCTAAAACTGATATAAGCGAACCCAAAATTGACCTCAATAGC
CCAAGTTCTGATGAACAATTGGTGGTTCGGGAACCGTATACATCAAAAGA
TTCGTTTAAAGAGAATCGATCAAGCCCGAGGGTAATCAAATCGACGGGTG
GCAAAAGTGATCAGAGCATAGTTCTAACCGGacataagaaaattgaaaaa
tattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000342_pilon | genome | sc0000342_pilon:8789..11303 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 346-753:2108 |
| Aaloc | 238-342:1634 |
| Aaloc | 133-234:1010 |
| Aaloc | 1-129:1 |
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