XLOC_002578 (mRNA) -

Overview
NameXLOC_002578
Unique NameXLOC_002578
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000331_pilon:181695..182401+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002578 ID=XLOC_002578|Name=XLOC_002578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=707bp|location=Sequence derived from alignment at sc0000331_pilon:181695..182401+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAAACAACCAAAAATAATAAAGGTTACACCTGAAAAGCCTAATATCAA GCTGAGAATAATCAAAGTGAAAACTGTGGAAGATGTCATGGATTCAGCTC TTTTATGTGACCTTGTTGACCAATTGAAAACTGATCCGAAAACATGTGAT AAGACTATAATTTACTGTCATTCGTATCCTGCTTGTGGTGatgtttattt gaaaataaaaggtCATTTTCCACGTGGATTTGATTTAACTTTGCTCGTTG AAATTTATCATGGAAGTACTGAGGATGAAATACAGCAAGAAATATTGGAT GATTTCTCAAATAATAACAGCTCTACACGCATAGTCATAGCTACAAATGC TCTTGGTGTTGGAGTTAACATTCGTAATATTCGTAATATCGTTCATTGGG GTGTCCCATCAGATATCGAGGGCTATGTTCAAGAAATTGGACGTGCTGGT CGTGATGAAAAAGATAGTTCGGCAACACTATTCTATCGAGGTAATGACTT AACACACTGTAAAGACAAAGATATGGTAACCTATATAAAAAACGAGCAGA AGGAATGTCGTCGAAAGCTTTtaatgtcatttttcaaaagtgagTATTCA ACCTCAGTAGAGAAGCATTTTTGTTGTGATGTCTGCTCTGAAATATGCAA TTGTACATTgtgttcacaaaatttaatggtTTGATTTTGGATAGCACAAT GTTATGA

Coding sequence (CDS) from alignment at sc0000331_pilon:181695..182401+

>XLOC_002578 ID=XLOC_002578|Name=XLOC_002578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1350bp|location=Sequence derived from alignment at sc0000331_pilon:181695..182401+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAAACAACCAAAAATAATAAAGGTTACACCTGAAAAGCCTAATATCAA
GCTGAGAATAATCAAAGTGAAAACTGTGGAAGATGTCATGGATTCAGCTC
TTTTATGTGACCTTGTTGACCAATTGAAAACTGATCCGAAAACATGTGAT
AAGACTATAATTTACTGTCATTCGTATCCTGCTTGTGGTGatgtttattt
gaaaataaaaggtCATTTTCCACGTGGATTTGATTTAACTTTGCTCGTTG
AAATTTATCATGGAAGTACTGAGGATGAAATACAGCAAGAAATATTGGAT
GATTTCTCAAATAATAACAGCTCTACACGCATAGTCATAGCTACAAATGC
TCTTGGTGTTGGAGTTAACATTCGTAATATTCGTAATATCGTTCATTGGG
GTGTCCCATCAGATATCGAGGGCTATGTTCAAGAAATTGGACGTGCTGGT
CGTGATGAAAAAGATAGTTCGGCAACACTATTCTATCGAGGTAATGACTT
AACACACTGTAAAGACAAAGATATGGTAACCTATATAAAAAACGAGCAGA
AGGAATGTCGTCGAAAGCTTTtaatgtcatttttcaaaagtgagTATTCA
ACCTCAGTAGAGAACTGAAACAACCAAAAATAATAAAGGTTACACCTGAA
AAGCCTAATATCAAGCTGAGAATAATCAAAGTGAAAACTGTGGAAGATGT
CATGGATTCAGCTCTTTTATGTGACCTTGTTGACCAATTGAAAACTGATC
CGAAAACATGTGATAAGACTATAATTTACTGTCATTCGTATCCTGCTTGT
GGTGatgtttatttgaaaataaaaggtCATTTTCCACGTGGATTTGATTT
AACTTTGCTCGTTGAAATTTATCATGGAAGTACTGAGGATGAAATACAGC
AAGAAATATTGGATGATTTCTCAAATAATAACAGCTCTACACGCATAGTC
ATAGCTACAAATGCTCTTGGTGTTGGAGTTAACATTCGTAATATTCGTAA
TATCGTTCATTGGGGTGTCCCATCAGATATCGAGGGCTATGTTCAAGAAA
TTGGACGTGCTGGTCGTGATGAAAAAGATAGTTCGGCAACACTATTCTAT
CGAGGTAATGACTTAACACACTGTAAAGACAAAGATATGGTAACCTATAT
AAAAAACGAGCAGAAGGAATGTCGTCGAAAGCTTTtaatgtcatttttca
aaagtgagTATTCAACCTCAGTAGAGAAGCAATTGTACATTgtgttcaca
aaatttaatggtTTGATTTTGGATAGCACAATGTTATGAGCAATTGTACA
TTgtgttcacaaaatttaatggtTTGATTTTGGATAGCACAATGTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_002578XLOC_002578-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000331_pilongenomesc0000331_pilon:181695..182401 +
Properties
Property NameValue
Aaloc619-678:648
Aaloc4-615:1