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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2116572..2121471+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002554 ID=XLOC_002554|Name=XLOC_002554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4900bp|location=Sequence derived from alignment at sc0000019_pilon:2116572..2121471+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCAGACGGACTGTTTTTAACGAAGAAACCAACAAACAATTGGAA
TGGATTTCATCTCATTCTGGTCTGTTTATTAGACTTTAAGATTATTACTA
TGCTCTAATCAATGCTCAGGCAATGCAATGCTTCGacgtttcaaaaataa
aagtctGGATATGTCTATAAgcgttttttcaatttttttcttatcttttc
aatgcaaTCTGACTCTTTAACATATATTTGTCAATTTGCAAAGCATTAGT
TTTGTAGGTGTGCAGTTAGTTTGGGAAATGAAACTACTACAACCTGCAAC
ATTTTTGGGTATCACTTATCAATTCATAGAAGCGTCAAACACTTAGGAGT
ATCTCATTAAACGCCAGCTCGATTTGGTATGGTTATAACAAGCCACATCA
ATTTaatgattcaaattttttttatttttagccaTCTGTGAGTATCAGTA
ATGTAGGACAACTTGCAGTGGATATGCTCTTACACAACTTGAAagacaaa
gtcaaaaaagtgtCCGGAATTTATGACGAAGCATTATTACCGGTCACGGG
GAAAGATCATAATGGAGAAATCTTCGAATCAATGGaaggtattatttttt
taaacgattaatttttgagttcaaaTACCTTGTTGAAGAATCAATATTTA
GCAATCTGCTCAGGTATTGGGCTATTCTAGAAAAGAATTGTACACCTAAC
TGTCTAACCGAGTCTGGCAGACCACACCATCGTAGTACCTTGTGATCAGA
CTTGTATATGTTTAAACAATATATTTCTTTTAAAGCTCTACTGTtagatg
ttttttatatttttggtgACATTGTGATGACATATTTTCAATCCAACCTC
GACTATAACCTAAAGTCTTTGATATTGTTGTTGGTGTAGGGAATAACAGA
CATCAAGATTTATTTGGACCtaaaattcgttttcgaaatattatttttca
gtATTTGAAGCTGAAAATTTAAAGTTGGTTATCATTCAACAAAGAGCACC
CTTCATTAAAGTAAGGAACACCTcgtcaatatttattttttcgctTACAC
AAGTTTCACCAGCCAAACGGTTCCTTAGAACTAACAGCTTCACAAAATTC
TAATTTGTTTCCCATTTATACCAAAAAATTACCAAAGATATCTAAAAGGT
TGAGAATACAACTTGACTGCATTGAACTTGCTTACATATTCGAGTGATTT
GCCTTGTCCCTCATAAGGATGGATTTAAGATAGTCATAGATAGTCCTATC
AAATTACAGACAATTACAATAGATCAATTCGATTTTCACTTATTCTTTCT
GTACCAGCCCAACCAAATAACATCACTTCGTTAAAGATTGTTCGAATGTT
AAAAAATAGCTATTGCACGCTCCAAcgcattagcgagtttatgtattctg
ACTTTTGAGGATAGTGACTGAGGCGATTTGGGAAAACCCGCATTTTTGAC
CTGCAAAATCGAGTACGGTAAGAGAACTTGCTTACCGTCGTCATCAGCGG
ATCAGGATCTAGATAATTCAAAAGCTAACCGTCTCcatacatacataaac
tcgctattgataTTTGGAGAACAGTGGAAAAATGTCTCCGACACAAAATG
GTGGCTAATAGCAACAAACCAAACtttatcttttcaatcgcgttttaaaa
caaagaaagaatttGGTTTGTTTACTGGCCAATTTTCACTTAactgaaac
attttttcttagGGAAGAATCCCAAGTTTTAGACAACGTCTACTGGCGTG
GATTGAACGATGTCAGTTCAAGAAAGTAACCATACTTTCCAGTGTCAGCT
CACATGTCAAGACAGATGCGGACTTAAATGAAAGGTCAGAATAATCATGG
ACAGTGTTAgtctgcacgcatcccctctgatatgtctTGATATAGGGGAT
GAGTATGATGTATGAAAATTTCCttccgagagttaccccaaaCTCAAAAA
AGCTCACAAATCCAATAATTGTATTAATctctagccattcaaatttttaa
tttaaatttaatgaaacttaaagttctcTCATATTACCaatcaagctaat
caagtttctaaaactcgaAAATATAAAGAtgggggtaactctcggacggg
aattttatacacggtACATTCCCTATATGAAAATCTTAGATCATCCATAA
AACATAATGATACGGCTATTCAtcatatgcaccattgcaatgtcttccaa
ggagccaacagctgattagttgaaagtgacgtattgtctgattttacgtc
acttacaaccaatcaactattgggtccatgatgtaatgtcagaagacatc
gCAGTGGTGCGGTTAAAATCTTCTTTGTATAGATTGTCCTTTTTTGGTCT
TGgagtgagaaaatttttataaattaattacaaaaaaagctagATTTATA
CAGTGGAAACTCCACATCTCGAAAACGCAAGTTTATccgaattatggaaa
ttttgagttatggagtaaggttaaCTGAAGGGagtagaaaacttgttcga
gttaaaaagacaTTCCATCTATAGAGGTTctagttaaagagactctactg
tatttgcAAATTATGCTTTTACTAAATATCCCTGTCAATCAATTTTGGTT
TGATTACTATGTTCCTTATGAGGTGGATTCTAATCACGTACATAAGATTA
ACATTCAGATTATACTGTTTATATTTTAGTTCACCATTCCGCTTTCTGTG
CAACAAGGACACTATTAGAAAGGAGCTTGTTTCAAAACATCAATGGATCG
AATATTCAGTTAAGAAGCTGTTAGAGCACAAAGGTAAAAATGAACCTGGA
TTATGAatagaatacaccttttcgaccttagccgccaattgccgcgcggg
catttttttatCCGCTTTATCCCattaaactcgatccaatccttttttga
cgcatttttctattgtctataggtgcgaaaaaagggactgggacggtttt
agtgggataaagtggacaaaaataTGCCTCTTTGGCAATTGGCGGcaacg
gtcaaaaaggtgtatataAATGCTGAtgcactttttgattttttggataA
TGGGCTGGGAGCTTCTTTGAAGGTGAGTCAACACAGTATGAAAAAATTAG
AGaggcccagctggcacacaacgttgtttcaacgtttatctaacgttata
tggacgttgtgaacgtcaaataaacgttgaaacaacgtttgtGCCAGCTT
gggggggggTGAAAGAGCCTCTAACAGGTTTTTACTTACGTGTTGTGTTG
GCGTGATGCTttagttgttgttgttttttagactaatttttcgatatttt
ttgcgtgatgaaaatagattttagcaattttagcaaaaaaattaccaCCA
TAGAGCCTCGTGAAGTTTGAGGACAAAATAGAACCGACTGTTCACAAATG
TCGCCTTCTTTCAGGTCAAAATAATGAACTTTGAAATAGAGGGCTGagtg
aattgaatttcaatGTTAACAAAAATCAGATTTCTGTTAAAAAATTCTAT
GCCACTACTTGTCAGAATCGTACCTAGACGGGTTCTCGTTTACCGTTATC
AATTTTTCTAATTACTTTTTAGGATCTCTAGAGCTGCCTGGATCAGGGAT
CGCCAAATCTCTTTACGAAGACAGGTATGGATTTATGACGaatatttttg
tcttttctattgactcaatcaaactaatttttattaaataCGTGAAGGAT
GTTTTttacctttcaaagtctttctaaAGGTTTAAAAGTCGAATTAGCCT
CTCTAAGGATCAGGATTTCCCTAATTGAGCCTCATAATAGTATAAAATCG
TCTCTTTAAGGTTCaccttttctcaaaaatttagtCTCTCAAAGGATCGC
TTCTCGGAGGTCCATTTCGCACATACCTGACATTCTCAAACATCCCCAGA
TGATGACCTAGAAActtcatgtttttttattcagtaAACAgtcagttttt
tattttattgtcatTAAAAGGGGTTAATGTGagtcagccccccccccccc
accaaagaaatatttttgtcttaTTCGACTTGGTTCTTTGATTGAATTCC
ATTCCTTTTCAGCGAATCACAAAATATTCCATTTGTGGTTTGTTTGGTCT
TTTGTAACCATGGTGACTCCAGGAAAGAACTTCGTGTAGCAATGCAGCAT
CTTCAACAATATTTGAATTTAGAATGGGCACTAGGTATACATGACAGTTT
TCGTAATTTTTTCCCTGATTTGGTTTTATCCGCTAGATTTAAAGTTCGTT
CGTTTTAAGCGTGTACTCCTTTTTTATCACGTAGAAACCACCCTCGACGT
CTAGTAGATGTACGCTGATATGGTTTACACATATCAACAATTAATACGTA
ACATATCGTTCTGCAAAAAGTGTACACGCTTAAGTGGATAGACCTAAGTT
CTGTTGGAAcggaaaaatataatttccccTAGATCTCTTGGACATATTTT
TCGTCATTGGAAGGAAAAGATTTCCCTAGCCAAATATCATTAGCTAATTA
TCGATTATATTTTAAGTACTTTAAGTACTTTTTTATAtcttgaaaaatcc
caaaatcaataatcaaaaatctccctcaaaatattttataaacacTACAG
CCGACTCTCAtttattcgaacctctactattcgaatctttctataattcg
aactaaaatattggtttcCTCAGCTAGAAACTCGTATAAGATATTTCTat
atttcgaatctttctcttattCGAAGACAATCTTTAGTCCCTTGAAGATT
GAATTAGAGACTGTTAACTGTATTACCAtggatgaaatcaaattttttta
agcgACGTTATCTTTTCTTCTTCGTAATAAAGGGGAGCTATCGGAACCAT
CACATTGGAAAATACAAAGCGCTTATGATAATGAGTTGATGATTTTCTGA
Coding sequence (CDS) from alignment at sc0000019_pilon:2116572..2121471+ >XLOC_002554 ID=XLOC_002554|Name=XLOC_002554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000019_pilon:2116572..2121471+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCAGACGGACTGTTTTTAACGAAGAAACCAACAAACAATTGGAA
TGGATTTCATCTCATTCTGATGCATTCAGACGGACTGTTTTTAACGAAGA
AACCAACAAACAATTGGAATGGATTTCATCTCATTCTGccaTCTGTGAGT
ATCAGTAATGTAGGACAACTTGCAGTGGATATGCTCTTACACAACTTGAA
agacaaagtcaaaaaagtgtCCGGAATTTATGACGAAGCATTATTACCGG
TCACGGGGAAAGATCATAATGGAGAAATCTTCGAATCAATGGaagccaTC
TGTGAGTATCAGTAATGTAGGACAACTTGCAGTGGATATGCTCTTACACA
ACTTGAAagacaaagtcaaaaaagtgtCCGGAATTTATGACGAAGCATTA
TTACCGGTCACGGGGAAAGATCATAATGGAGAAATCTTCGAATCAATGGa
agtATTTGAAGCTGAAAATTTAAAGTTGGTTATCATTCAACAAAGAGCAC
CCTTCATTAAAtATTTGAAGCTGAAAATTTAAAGTTGGTTATCATTCAAC
AAAGAGCACCCTTCATTAAAGGAAGAATCCCAAGTTTTAGACAACGTCTA
CTGGCGTGGATTGAACGATGTCAGTTCAAGAAAGTAACCATACTTTCCAG
TGTCAGCTCACATGTCAAGACAGATGCGGACTTAAATGAAAGGGAAGAAT
CCCAAGTTTTAGACAACGTCTACTGGCGTGGATTGAACGATGTCAGTTCA
AGAAAGTAACCATACTTTCCAGTGTCAGCTCACATGTCAAGACAGATGCG
GACTTAAATGAAAGTTCACCATTCCGCTTTCTGTGCAACAAGGACACTAT
TAGAAAGGAGCTTGTTTCAAAACATCAATGGATCGAATATTCAGTTAAGA
AGCTGTTAGAGCACAAAGTTCACCATTCCGCTTTCTGTGCAACAAGGACA
CTATTAGAAAGGAGCTTGTTTCAAAACATCAATGGATCGAATATTCAGTT
AAGAAGCTGTTAGAGCACAAAGGATCTCTAGAGCTGCCTGGATCAGGGAT
CGCCAAATCTCTTTACGAAGACAGGATCTCTAGAGCTGCCTGGATCAGGG
ATCGCCAAATCTCTTTACGAAGACAGCGAATCACAAAATATTCCATTTGT
GGTTTGTTTGGTCTTTTGTAACCATGGTGACTCCAGGAAAGAACTTCGTG
TAGCAATGCAGCATCTTCAACAATATTTGAATTTAGAATGGGCACTAGCG
AATCACAAAATATTCCATTTGTGGTTTGTTTGGTCTTTTGTAACCATGGT
GACTCCAGGAAAGAACTTCGTGTAGCAATGCAGCATCTTCAACAATATTT
GAATTTAGAATGGGCACTAGGGGAGCTATCGGAACCATCACATTGGAAAA
TACAAAGCGCTTATGATAATGAGTTGATGATTTTCTGAGGGAGCTATCGG
AACCATCACATTGGAAAATACAAAGCGCTTATGATAATGAGTTGATGATT
TTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2116572..2121471 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 688-753:4835 |
| Aaloc | 565-684:4064 |
| Aaloc | 514-561:3575 |
| Aaloc | 409-510:2681 |
| Aaloc | 286-405:1713 |
| Aaloc | 229-285:954 |
| Aaloc | 70-225:432 |
| Aaloc | 1-69:1 |
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