XLOC_002525 (mRNA) -

Overview
NameXLOC_002525
Unique NameXLOC_002525
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:2051342..2053058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002525 ID=XLOC_002525|Name=XLOC_002525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1717bp|location=Sequence derived from alignment at sc0000019_pilon:2051342..2053058- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACGTGTTAGAAAAGCTGCTTCAACAATAAAAAATACACTCACAAC AAGACAAAAAGAGGCTATTCCACAGGAACCTACAACTGCTACACAAACCA AAGACTCACAAGACTGGTTAACACTTTTATCACAGCTTCCAGAACAACCA GCAACCATCTCTACTGGTTTACAAAACATTCGAATAACAAGAAGCCATTC GAATAAACTTCAACAAAACAAACAATTAGTTCGTAAGCTTTTCACCGCTG AATCTGTCTCCAAAACACAACGACGAACCAATATGTCTGATTCTGAAGGA GACCATGGAGCTTTTGCAAATCAAACTTATGTCAAACCTGCCCGTGCTGT TGGTGTAAAATTACCGAAAAATACTCATCCACCATATTTACAGATGATCC AAGGTGAGTTTTTTCCAATATTTACAGCAATGTCTCGAACTACATGGGCC CGGCGAGCAATTATGAGTGGGGGGGGGGCAATTTGGTTGAGCAACGAAGA AATCTTTCACTTTTTACACCCTCCAAAAACCTTAAAACGTTATCTAATTG GGGAGAATAATAGTTTTTATGGATTAAAATAGTAACTTTTAAAATAATAT GGCATGGTCTACAAAAAAGTGGGGGGGGGGTAGAGTAATAAATAGCGAAG GGGGCTCTAAATTTTGCCCGAAAAGAAGCGGATAGGATATGTATACTTAT TTCCCCAAATTTGCGAAAAGGAGGGAGGAAACCAAAAAATAAATTTAAAG AAAACAAATTGTACAAAAACTTTCAGGGTCAAGTTATCTTAAAAAGTCGG GCCTTGTAATTCTTGTAAGAAATTGTGAAATTTATTTGATTCCGCATAGC CTGAAAATATTTTTAACTTGTTCTTAATGTTTTGACCATGGAAGACTTTG TGTTCCAACATAGTTTGTTTCTATAAAAATGTTCTCATGTGAATATCTTA TTTTCATCTAATCATCCCGAATTTTTATGATTCAGAGTCGCTAACAGAAT TAGAGGAGCGTGGCAAAGGTGTATCTCGTGCAAAGATAATTGCCCACATT AAAGAGAAGTACACTTTACAAGATGTCAATAATCTTGCTTTGAACAGAGC CATGAAAGGGGCCATCGAAAAGAATATCATCCTGAATTCGACTGGTGAGT GCTGTTTCCTCAAATTAACAAAAGAAAATCTAATTTAAAGTATTTAGTAA AAGTATCTTTAAAAAACTTTCATCTTTGTTTTTAGTGCTTCTAACCATGG CGTTCAGAATTCTAAGGGACCTATTTTCAAATTTAGTATGGCATGGCTGC TTCAACAGCACCCTGAACTCAGGGCTTATCCGACCCCCTTGTGCTATTGA TAAATTGATGGACGCCTTGCCGGGGGATATAAATGATTCCTCCAGTTTTA CGGAGCTGGCCTCTTTACGTCGCAGAATCGTTTATCGGCCTTGGTTCGCG AGGGTTTTTTCAGTAGTTTCCGACACAGCTTTTGTTTGCATTGTACTTGA AACGAATGACGAAAAGTGTTTTTATTTTTCCTTTATTTTGAATACCTAGC TGTTGTCGAGGATTTTGTCAAGTTTCATTTTAACGAAATCTTAAATTTCA GGTACTGGTCTAACCGGATCTTTCAAGTTGACAAAAGAATACAAAGAAGA GAAGAAACAAGCTGCAAAAGTGCTGAGTAAGCAGAAAGAAAGTAAGAGCA AGCTCAAAACCAAAGAA

Coding sequence (CDS) from alignment at sc0000019_pilon:2051342..2053058-

>XLOC_002525 ID=XLOC_002525|Name=XLOC_002525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000019_pilon:2051342..2053058- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACGTGTTAGAAAAGCTGCTTCAACAATAAAAAATACACTCACAAC
AAGACAAAAAGAGGCTATTCCACAGGAACCTACAACTGCTACACAAACCA
AAGACTCACAAGACTGGTTAACACTTTTATCACAGCTTCCAGAACAACCA
GCAACCATCTCTACTGGTTTACAAAACATTCGAATAACAAGAAGCCATTC
GAATAAACTTCAACAAAACAAACAATTAGTTCGTAAGCTTTTCACCGCTG
AATCTGTCTCCAAAACACAACGACGAACCAATATGTCTGATTCTGAAGGA
GACCATGGAGCTTTTGCAAATCAAACTTATGTCAAACCTGCCCGTGCTGT
TGGTGTAAAATTACCGAAAAATACTCATCCACCATATTTACAGATGATCC
AAGATGCCACGTGTTAGAAAAGCTGCTTCAACAATAAAAAATACACTCAC
AACAAGACAAAAAGAGGCTATTCCACAGGAACCTACAACTGCTACACAAA
CCAAAGACTCACAAGACTGGTTAACACTTTTATCACAGCTTCCAGAACAA
CCAGCAACCATCTCTACTGGTTTACAAAACATTCGAATAACAAGAAGCCA
TTCGAATAAACTTCAACAAAACAAACAATTAGTTCGTAAGCTTTTCACCG
CTGAATCTGTCTCCAAAACACAACGACGAACCAATATGTCTGATTCTGAA
GGAGACCATGGAGCTTTTGCAAATCAAACTTATGTCAAACCTGCCCGTGC
TGTTGGTGTAAAATTACCGAAAAATACTCATCCACCATATTTACAGATGA
TCCAAGAGTCGCTAACAGAATTAGAGGAGCGTGGCAAAGGTGTATCTCGT
GCAAAGATAATTGCCCACATTAAAGAGAAGTACACTTTACAAGATGTCAA
TAATCTTGCTTTGAACAGAGCCATGAAAGGGGCCATCGAAAAGAATATCA
TCCTGAATTCGACTGAGTCGCTAACAGAATTAGAGGAGCGTGGCAAAGGT
GTATCTCGTGCAAAGATAATTGCCCACATTAAAGAGAAGTACACTTTACA
AGATGTCAATAATCTTGCTTTGAACAGAGCCATGAAAGGGGCCATCGAAA
AGAATATCATCCTGAATTCGACTGGTACTGGTCTAACCGGATCTTTCAAG
TTGACAAAAGAATACAAAGAAGAGAAGAAACAAGCTGCAAAAGTGCTGAG
TAAGCAGAAAGAAAGTAAGAGCAAGCTCAAAACCAAAGAAGTACTGGTCT
AACCGGATCTTTCAAGTTGACAAAAGAATACAAAGAAGAGAAGAAACAAG
CTGCAAAAGTGCTGAGTAAGCAGAAAGAAAGTAAGAGCAAGCTCAAAACC
AAAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_002525XLOC_002525-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:2051342..2053058 -
Properties
Property NameValue
Aaloc565-678:115
Aaloc406-561:731
Aaloc1-402:1718