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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000417_pilon:12185..14096+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002298 ID=XLOC_002298|Name=XLOC_002298|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1912bp|location=Sequence derived from alignment at sc0000417_pilon:12185..14096+ (Clytia hemisphaerica_ch_hm2_pilon)
GACTTGGAACACATATTTGGCATAAATGTCTCTTTATTGAAAGGTACCAA
AAGTTGCCTAAAGTTATTTTTGTGTGTCCTGGAAAAAGTCCTTCTTTTAT
TCCTTATGTATGTCTGTGATTTTAGTATTGAGCCCCTTATCTTACCAGGG
ACTTCATCTCCTTGGCAAcaggttttcttttaaaatactttcattaaagg
gacataacagtacttgcgaaatttgtaaacaaactgtatgcagcggatac
aaaatcaaaacaaatgtcacatgtcaaaataaaaaatcaaaccaaatatg
gctaatttttattgttcaattgttttacaagtttgttttggacacgtgat
tttcattgttctctttaatgacacgtggttcgcgcaatgtttacattttt
actactgtaatgtccctttaatagTCTTTCAAGGAAGGaattgtttcatt
gtttttcattATGAAATTGCTCATTCCAGGTTcttattcttcttcttttt
tagagAGTATGGCAACAAAAATTGCTTTTAACTCAGACGATAAAATAGTC
GATCAAAATGCATGTGTGGAACAAATCAATGTCAAAGatctggaaaaata
ttttgatgtagACAAAATTgtgcaatatattttacaagGAAAATATTCGG
TTATTGCATTGCAGTTTCCAGATGAATTGATGACTTACTCAACTTCTATT
GCATCTGAATTAAAATCTAAAACAGAAGCTCAAATATTTGTTTTAGCTGA
CACATCTTACGGAAGTTGTTGCGTTGATGAAGTTGCTGCAAGTcattaca
atgctgacttaatAATCCATTTTGGACAAAGCTGCCTATCTAATACAGGA
AAAATTGCTGTTTATtattcttttggaaaagaattgattgacattgatgt
gcttCTGTCAAAATTAGGAGAAAGATTCACACCAGACGACAAAATATTGG
TTCTATACGATGTTCAATATGATTATCCTATTAACTCTAACCTGGATGTT
GTTAAGAAAAACTTTCAGAATGCTTCAATCTCGTGTTTGAATTTGTGCAA
CTCAAGTGAGATTGCTGATAATGTTACCATCAAATTTGGTCGTGTATACA
CCTTGACACACTCTATTGAGGAATACACCTTAGTTTTTATTGGATCAAAT
GAAAGAACATTATATAACACAATCGTCTCTTATCCTCGAAATACTGTTTA
CAGTTATGATGTAAAACTTGAAAAACTGCAAAAAGAGGATTTAAACGTGA
ACAAGTATTTAATGCGAAGattttatttgattgaaaaagcCAAGGATGCA
CAGATAGTTGGCATTGTCATGGGTACTCTTGGAGTTGCCAGATACAATGA
TATGGTCAACAGGTTGAAATCCATTTTAAAACAATCTGGAAAGaaatttt
acacctttattattGGAAAGATAAACCCTGCTAAATTAGCAAATTTCATG
GAAATTGATATGTTTGTGCTGGTAGCTTGTCCAGAAAACAGTTTATTAGA
TTCGAAAGAGTTTTATAAACCTATCATCACGCCATATGAAATGGAGATGG
CTTGTTTATCTGGACGTTCTTGGTCCGGTGATGTTGTGACTGATTTTCGA
GAATTACTTTCGGGATCAAAACGATTTGTTGAACTTGACGGAGAAAATGA
cggaaaagataaaaaaccaGAATATTCTCTCATTACTGGGAAACTTCGAA
ATAATAACACCATGTCAGAGCCGTTATGTACTGATGTTGCAACACGTAAT
GAATCGAACAGTCTAGTTGCGTCTTCTGCAAGAAATGCAAGTGAATATTT
AGCATCAAGAACATGGCAGGGACTTCAAATCGACTCTGGTAAAACTGAAG
TTAAACTTGCTGTTGAAGGACGATCTGGAATAGCGATGAAttataaaaac
gaaaaagagtAG Coding sequence (CDS) from alignment at sc0000417_pilon:12185..14096+ >XLOC_002298 ID=XLOC_002298|Name=XLOC_002298|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2904bp|location=Sequence derived from alignment at sc0000417_pilon:12185..14096+ (Clytia hemisphaerica_ch_hm2_pilon)
GACTTGGAACACATATTTGGCATAAATGTCTCTTTATTGAAAGGACTTGG
AACACATATTTGGCATAAATGTCTCTTTATTGAAAGagAGTATGGCAACA
AAAATTGCTTTTAACTCAGACGATAAAATAGTCGATCAAAATGCATGTGT
GGAACAAATCAATGTCAAAGatctggaaaaatattttgatgtagACAAAA
TTgtgcaatatattttacaagGAAAATATTCGGTTATTGCATTGCAGTTT
CCAGATGAATTGATGACTTACTCAACTTCTATTGCATCTGAATTAAAATC
TAAAACAGAAGCTCAAATATTTGTTTTAGCTGACACATCTTACGGAAGTT
GTTGCGTTGATGAAGTTGCTGCAAGTcattacaatgctgacttaatAATC
CATTTTGGACAAAGCTGCCTATCTAATACAGGAAAAATTGCTGTTTATta
ttcttttggaaaagaattgattgacattgatgtgcttCTGTCAAAATTAG
GAGAAAGATTCACACCAGACGACAAAATATTGGTTCTATACGATGTTCAA
TATGATTATCCTATTAACTCTAACCTGGATGTTGTTAAGAAAAACTTTCA
GAATGCTTCAATCTCGTGTTTGAATTTGTGCAACTCAAGTGAGATTGCTG
ATAATGTTACCATCAAATTTGGTCGTGTATACACCTTGACACACTCTATT
GAGGAATACACCTTAGTTTTTATTGGATCAAATGAAAGAACATTATATAA
CACAATCGTCTCTTATCCTCGAAATACTGTTTACAGTTATGATGTAAAAC
TTGAAAAACTGCAAAAAGAGGATTTAAACGTGAACAAGTATTTAATGCGA
AGattttatttgattgaaaaagcCAAGGATGCACAGATAGTTGGCATTGT
CATGGGTACTCTTGGAGTTGCCAGATACAATGATATGGTCAACAGGTTGA
AATCCATTTTAAAACAATCTGGAAAGaaattttacacctttattattGGA
AAGATAAACCCTGCTAAATTAGCAAATTTCATGGAAATTGATATGTTTGT
GCTGGTAGCTTGTCCAGAAAACAGTTTATTAGATTCGAAAGAGTTTTATA
AACCTATCATCACGCCATATGAAATGGAGATGGCTTGTTTATCTGGACGT
TCTTGGTCCGGTGATGTTGTGACTGATTTTCGAGAATTACTTTCGGGATC
AAAACGATTTGTTGAACTTGACGGAGAAAATGAcggaaaagataaaaaac
caGAATATTCTCTCATTACTGGGAAACTTCGAAATAATAACACCATGTCA
GAGCCGTTATGTACTGATGTTGCAACACGTAATGAATCGAACAGTCTAGT
TGCGTCTTCTGCAAGAAATGCAAGTGAATATTTAGCATCAAGAACATGGC
AGGGACTTCAAATCGACTCTGGTAAAACTGAAGTTAAACTTGCTGTTGAA
GGACGATCTGGAATAGCGATGAAttataaaaacgaaaaagagtAGagAGT
ATGGCAACAAAAATTGCTTTTAACTCAGACGATAAAATAGTCGATCAAAA
TGCATGTGTGGAACAAATCAATGTCAAAGatctggaaaaatattttgatg
tagACAAAATTgtgcaatatattttacaagGAAAATATTCGGTTATTGCA
TTGCAGTTTCCAGATGAATTGATGACTTACTCAACTTCTATTGCATCTGA
ATTAAAATCTAAAACAGAAGCTCAAATATTTGTTTTAGCTGACACATCTT
ACGGAAGTTGTTGCGTTGATGAAGTTGCTGCAAGTcattacaatgctgac
ttaatAATCCATTTTGGACAAAGCTGCCTATCTAATACAGGAAAAATTGC
TGTTTATtattcttttggaaaagaattgattgacattgatgtgcttCTGT
CAAAATTAGGAGAAAGATTCACACCAGACGACAAAATATTGGTTCTATAC
GATGTTCAATATGATTATCCTATTAACTCTAACCTGGATGTTGTTAAGAA
AAACTTTCAGAATGCTTCAATCTCGTGTTTGAATTTGTGCAACTCAAGTG
AGATTGCTGATAATGTTACCATCAAATTTGGTCGTGTATACACCTTGACA
CACTCTATTGAGGAATACACCTTAGTTTTTATTGGATCAAATGAAAGAAC
ATTATATAACACAATCGTCTCTTATCCTCGAAATACTGTTTACAGTTATG
ATGTAAAACTTGAAAAACTGCAAAAAGAGGATTTAAACGTGAACAAGTAT
TTAATGCGAAGattttatttgattgaaaaagcCAAGGATGCACAGATAGT
TGGCATTGTCATGGGTACTCTTGGAGTTGCCAGATACAATGATATGGTCA
ACAGGTTGAAATCCATTTTAAAACAATCTGGAAAGaaattttacaccttt
attattGGAAAGATAAACCCTGCTAAATTAGCAAATTTCATGGAAATTGA
TATGTTTGTGCTGGTAGCTTGTCCAGAAAACAGTTTATTAGATTCGAAAG
AGTTTTATAAACCTATCATCACGCCATATGAAATGGAGATGGCTTGTTTA
TCTGGACGTTCTTGGTCCGGTGATGTTGTGACTGATTTTCGAGAATTACT
TTCGGGATCAAAACGATTTGTTGAACTTGACGGAGAAAATGAcggaaaag
ataaaaaaccaGAATATTCTCTCATTACTGGGAAACTTCGAAATAATAAC
ACCATGTCAGAGCCGTTATGTACTGATGTTGCAACACGTAATGAATCGAA
CAGTCTAGTTGCGTCTTCTGCAAGAAATGCAAGTGAATATTTAGCATCAA
GAACATGGCAGGGACTTCAAATCGACTCTGGTAAAACTGAAGTTAAACTT
GCTGTTGAAGGACGATCTGGAATAGCGATGAAttataaaaacgaaaaaga
gtAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000417_pilon | genome | sc0000417_pilon:12185..14096 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 46-1452:506 |
| Aaloc | 1-42:1 |
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