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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:317316..324114- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002294 ID=XLOC_002294|Name=XLOC_002294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6799bp|location=Sequence derived from alignment at sc0000236_pilon:317316..324114- (Clytia hemisphaerica_ch_hm2_pilon)
CATGAATTCCAAGCAGAAACCAGGCAACTTTTGGACATCGTTGCAAGATC
CCTCTATTCTGAAAAAGAGGTTAGCTACGATATTAACTTTTTATCAGATA
TTTATTAGTCGGAGGCCTAAAGTTACGAACCAACAAGAAAAGCTATTTAA
GGTTTTCCTTCAGACCGCAATTATTGCTCAAAACTTTAAAGTATCATAAA
AGCTTGTAGCTTTTGATTTAGAAGATGGCTTTGGTACCATTGGAAGGCTA
TTTTCATACTCTGCGTCCCTCGTGGTCTAAGGGTTGAATTAATAGGGTTG
AATTCTTTTGAAGGGAAAAAATTCACTTATGATAATTGTCATATTTAGGT
CTTCATTCGAGAGATTGTGTCGAATTCATCGGATGCTCTCGAGAAGCTGC
GGCAAGTTCAAGTTACTGGTCAACAAATTTCTGATTCTGATTCTCCCCTT
GAAATCCATCTGACCACTGATGAAGAAAAGGGCCTGTTCATTATCCAAGA
TTTTGGTATCGGCATGAGCAAAGATGAGCTTATCAATAACCTTGGTACGA
TCGCTCGATCAGGCTCAAAAGCTTTTATTGAGAAAGCTAAGCACGAGAGC
ATTGACGCTCAAAACATCATTGGACAATTCGGTGTGGGATTTTATTCCAC
CTTTATGGTTGGTGATAAGATTGATGTTTTTACCAAATCTTATGAGCCAA
GTGCTTCTGGATATCATTGGTCATCCGATGGGTAAGTAGAAAAAAAAGGC
TTCACAAAATAATAACCAAATCTGTTATGTCGAATTCATTTTTTTTTCCT
CGATTTAATCCTATTAATTTAGTTGTAAGGTTGCCAGTCACTTATAACTT
TGTGATTTTCTCAAGCTTGTATCGGAGCAATAATCTCTTTCCCACCTTTG
CGAGTTTGTCACGTATTTTGTAGTTTGAAAGATAAATGAAATGTTTAAAA
AATTATATTATCATGTTTGTGTAATGCAATTGACGTAACATGTCTTAAAA
TACTATTCAATCGAAGTTTTTTTGTTTACCGTTGCATAACAGCCTGTTCA
AACGTTCAGTGAAGGGGCCAGTTATTCATATACTGAAACCGCTAAGGAAG
AAAATTGATCTTAAGCGAGAATTTTATCACATCAGCAGGGTTCGAATTAT
AGCTTCGCACTTCGCAAAATGCGAAGTGAATTTTAGATTTAGCGACCAAA
AAAGATTTTCTAACTCAAAAATGCGAAGCTAAAAAATACCTCGTGACTTT
CTTCATTCGTTAATCTATTGCTTTATCTACTCGCTACTTCGCTACTTTCT
TCATTCGTTTATCTGTTGCTTTATCAACTCGCTACTTCGCTTCTTTATTC
ATTCGTTTATCTATTGCTTTATCAACTCGCTACTTCTCTATTTTATTCAC
TCGTTTATCTATTGCTTTATCTACTCGCTACTTCGCTACTTTCTTCATTC
GTTTATCTGCTGCTTTATCAACTCTCTACTTCGCTTCTTTATTCATTCGT
TTATCTATTGCTTTATCAACTCGCTACTTCGCTATTTTATTCATTCGTTT
ATCTATTGCTTTATCTACTTGCTACTTCGCTATTTTATTCATTCGTTTAT
CTATTGCTTTAACTACTCACTACTTCGCTACTTTATTCACTCGTTTATCT
GTTGCTTTATCAACTCGCTACTTCGCTATTTTATTCATTCGTTAATCTAT
TGCTTTATCTACTCACTACTTCGCTATTTTATTCATTCGTTTATCTAAGA
TAAAGTGAAAAGAACAAGAGCTAAATAGGTTGATAACTTTGTGAATCTTC
TGACGTCAATTTTTGAACAAGTCAATTTTGACCTCCTTTTTAGAAAACCT
CATAACTATACAAAAAATTAGTTTCTGACATTGAAATTTTCAGGAGTGCT
CTCAATTAAGTTAAAGTTTACCCATACAAAAGTCGATAGCACAACGTGTG
GAAACTTTTTTTGGACCACCCGGTATTGCTTTATCAACTCGCTACTTCGC
TAGTTTATTCATTCGTTTCTCTATTGCTTTATCTACTCGGTACTTCAAAA
CTTCATTTTACTTTGCTTTGTCTTTAATCTCTTACTTCAAGTCTTACTTT
GCTTTTCTAGAGAAATAAATTGAAGATACTTTCGCATTTTCTTCCAAACA
ACATCGCAAAATACTGAAAATGCTTCGCAAACAGTGAAAAATAATTGCCG
ATGGCGCTCCTTTTTTTTACCTCGCTTCGCTCGAAAAATATTGCTCCGAA
AAGGAAGGAAGCCATTCTATTGGTTAGAAGTGACGTAAAACTTGAATGTA
ACCAATAGAATGTCTTTATTTCGTTTCGGAGCGAAACGGAATCGTAACGT
CTGAACATGATCTTAGTGGGACAATTGAAACAAATATGAGCGATCTCCAT
CCATTTACGAAAACCTTTCTCCTATTAACAGATCTGGCTCATACGAGATC
GCCGAAGCTGAAGGCGTAACACGTGGTACAAAAGTCATCATCCATTTGAA
ATCTGATGATCGAAGGTTCTCCCTCAAAACTACTGTCGAAGGTGAGAATT
TACAAAACAGAACACTCTCTAGATGAAGAATCTAAAATGAAATGTATTCA
CTAAAGATACTAGGGTTCACGAAGGTGCTGTGAAAATACGATGCCATTAC
AAAAACAGTAATATCCTTAGTATATGTTCAATTTTATGGCTTTTTTGAAA
ACAAGTACCTGAAAGAATGGTCCAGGCAACTATCTGTTTTTGAACGTTTT
GAAGCTTGAATAAGACTTTTCGTAGATAACTTACCTGTATATTTTAGATA
TAATTCGGTGCTACAGTAACTTTGTCGGATTTCCCATTTACTTAAATGGC
TCAAGACTCAACAACATTGATGTAAGTGTATCTGAATGGGCGTGTATTCC
TTAAATTTTCTAATAGTTTAAACGTTATTTGATGCCTTAGATATCTGTAT
CTAAAGGATTGTTTATAAAGAATTAAACGAGGTTGGCATGAATTACCCCC
TTACTCCACACACGTTTTAAAAAGAACCTTCTGATAAATAGCTCATAAGA
TTATGTACATCCCTCATCCCTTGACCCTGACCTTGGTAGATACTTCATAC
GGACACTCGTTCGTTTACGTTCTTGCAATATTTGCTGAAATGGTTTTGAG
AACTTCACAGACAATTATCAATACGAATGTAAAAACTTGACTTGAATAAT
TATAGGCTTTATGGACGAGCTCAGAGAGGGATGTCAGCGAAACAGACCAT
TCCCAATTCTATCAGTTTATTTCCAATACGTCAGACGAACCTCGCTATTC
GCTCATGTACAAAGCGGACGCCCCATTGAACATTCGTAGTGTTTTATACG
TACCTTCCAATATCCCAGAAATGTTCGGTTTCGGGCGTATGGAGCTCGGT
GTTAGTTTGTATTCACGGAAGATTTTGATTCAATCGAAAGCGCAAAAGAT
TTTACCGGAATGGTTACGTTTCATTCGTGGTGTTGTTGACAGTGAAGACA
TCCCATTGAACTTGAGTAGAGAACTCCTTCAAGATAGTGCTTTGATTCAA
AAACTGAGTGATGTTCTTGTTACTAAACTATTAAGGTACTTCTTAGAACA
ATCGCGAAAAGATGAAGAAAAATTCACGAAATTTATGAAAGAGTGTGGAA
ATTATTTCCGGGAGGGTGTGGTCACTGACCAATCACCTTCTCGACGTGAA
GATATCGCCAAATTGCTGAGATTTGAAAGTTCGAAAGAAAGACCAGGAAA
TTTGAAATCTTTGATGGATTATATTTCTGGAATGAAAGAAGATCAAAAAG
AAATTTTCTTCCTTTCTGCTCCAAGGTACGCTACTTTCTTCCCGTCATGC
CTTTCTTTTAAGGAAGTTTCAAAACAAAACTTACGTGGTCTTTAAAAAAA
TGTTGATCTCGATTATGTTTTATGATTGTTCATTTCAATAAGAGGCCACT
CACATATCGATTTTCCCACGACTAACGTCAAAATGACACGAGACGATACT
GGCTTTGTGTAAAAACCATGAAAAATAGATGACCAAAACTATGCGTAGCG
AGAGTGATTAACAAAATAAAAAAAAAATTTGATATTTGTTAGAAAAATTA
GAATTAAATCAGTCTCGAAGATCGATGTTTTGATTAATTTTCTTAGCGTC
AATGCCTCTGACCCCCACCCCCTCGCGTCATTTTGGCGTTAGTTTATTAG
GAAATATCGATATGTGAGTGGCCCCTAATCGATTCTATAAATGTATCACG
CGCAGTTTCGAACGAGCCAACCCGACAACAAAATCTTCACACAGTAGTCA
ACTAGTACCACTTATTTTCCAGCCGTGAGCTAGCAGAATCATCGCCATAT
TACGAAGCATTGAAAGCAAAAGATGTGGAAGTACTTTTCACATACGAAGA
AAATGATGAAGTCGTTTTTGCTGCTCTCAAAGAATTCCAAAAGAAAAATA
TAATTTCTGCGGAAAACTATTTGATGGGTTCAGATCCTCTCACTGATGAC
GTCATCACCGATCAACCCGACATTGGTAAGAGCACTCTTCGTTTTGTTTT
GTACAAATATTGATCATCCCTGTACTAATAAAGCCTTCAAGCGTCTGCTT
TAAGAACAACAACGACTTTGAAAACACAAACTTATAAGAATTTGCAATAT
ACCCAATGTTCATTCATTTCAGACCACTATAATTCTAGGAAATTTACAAG
GTACCACTTTGGATTGATTTAGTTCCCTTCTTATCACTTTTCCTTTCTTT
TATTGATTTCAGAAAAATTATCGGAAACTGAGACAAACGAACTAATGGAT
TGGATTCAAAACACACTTGGAAAAACGAAATGTCAAAACATTAAAGAATC
GAAACGCCTCGCATCACACCCTGCAATGATCACAGTGCCCGATATGGGTG
CAGCTAGACGATGGTTGAAATTCGTCAAATCTGGCCCCAATACTGATCTT
CTGAAGATGAAATTTGAAGTACTTCAACCAACTTTTGAGATCAATCCCAA
CCACGAGATCGTCCGCTCACTGAACACACTAAAAGGAAGCAATCCCATGC
TTGCTGAACTCTTGGTCAACCAGGTAAAGAAACGAATTTTAAAAGTCTGT
TCCAAAATTTTTGACATTCGGAAATACATACTCTCGGGTACCTAATAGCC
GGGGGGATTGGAATAAGCGGGAGGGGGGTTGGAAAAAATCTCAAAACTTA
ATAAGCGGGGGGGGGTTGGAATAAAAATGTCCTGGGTGGAAAATGTTTGA
AAATGAGACAAATACAGCTGAATTAGGACAAAAGAGGGAACTTTCAAAAA
CATTTTCCCAAAAAATAATAAGCCCCCGGGGGGGGGGGGTTGGAATAAGA
ATGTCCTGGGTGGAAAATCTTCAAAAAATTAATTATAGCCGTCCCCTATT
AGGTACCCGAGAATAATCTCGAATCAAGGCTATGATTAAAAGTAATACCT
TGTAGTAAAGAAAGTTTTGAGTGGATAAATTCAAAGTTGCGCTTGTATCA
TCATATATTGTGAATTCAGATTTTTCATACCATTTTCAGATCTGATCTGA
TTAACTGATTAAATATTTGAAATTTGAGATTTTGGTTGAAAAATCTTCAA
GCAATCTATCAAGACTGTCATTTTTTCGGAGAAAAAACACGATTTTAAAT
CTAGGACGTAATCTCTAACATATTCGTGAATAACTAGAACGTAGAAGGAT
AAAAAACTATAAACACGCTCTTTTTATAAGAATACCTTATCGGCCAAAAC
TTAGTCGGCCTTGATTTTAGCTAGTCGGCCCTGATTTTAATCACCAAGCC
AAAATTTAGTCACTTAGGGCCGACTAAGTTTTGGCCGATAAGGTAGTGCC
TATAAGAATATCAGGGGAGATTTTGTGAATTGACAAGAATATAAGGGTGG
GAAAAATCAAATGGAAGCATGATTTCTATCAGGAGATGAATTGTTGTTTT
TTATACGTAAAACGTAAAACATAAGAAATTTTGATATCGTCTTAGAAAAT
GAAAAATATTTTTTTATAAAAAATGTAAAGAAAATCTCATCCTCGGATTC
GGAAAACTCCTAAGAATACTTCATCCTCAGCCAAAAAGAAACACTTTTCT
TATAAAAAACCGTGCATCATTTCGATTTAATGGTACGACCTTTTGCGTAG
GCTCACAAGCTGAACTTGTAATCACCATATTAAGTATAATCAAAGAAATA
TTTCTTTGGTATAATTGAATGCAGGTTTTCATATCAAAAAAGGTGTGGTT
TTAATTCAGAAAAAAGTTTTTTGTCAACGGAAGATACCTGCAGAAAGCAG
TACGGGGTGTACGGCTGTTCAAGTTACCTTTCTTAGCCTTCTTGAGTCAC
TGTTTGGAAATTACATATTTAGATGAATACAGGACGTTAAATTTCCTACG
GAAACACCCCGGTTTTTGCCAGAAGTGGCAAATTTAAAGTAGGGAAAAAA
TAATTGCTTCATTTTTTCATCTAGTTGCAAAACCCGGGAATTTGCGTAGA
AAGCATTACATCAATCTAGTATCGCTTGCTTCACAAACTGCGACAAAAAT
CTTCAAAATGAAAAAGTTGGACTGATTCTTTGCTTTGTGTTGCCATTATA
ATCAATTTTAACAATTTTAAACCACCTCTATTTTCTTTTATCCTTTTAGC
TTTTTGACAACGCGCTTATTACTGCTGGTTTGTTGGACGATCCTCGTGAA
ATGGTTGGCCGATTGAACACCCTTTTGTCTAAAGTGATGACCAGATTAAA
TATCGAAGAACAGAAAAAGGATAAACAACAGACCATTATTACTCCTTGA Coding sequence (CDS) from alignment at sc0000236_pilon:317316..324114- >XLOC_002294 ID=XLOC_002294|Name=XLOC_002294|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3840bp|location=Sequence derived from alignment at sc0000236_pilon:317316..324114- (Clytia hemisphaerica_ch_hm2_pilon)
CATGAATTCCAAGCAGAAACCAGGCAACTTTTGGACATCGTTGCAAGATC
CCTCTATTCTGAAAAAGAGCATGAATTCCAAGCAGAAACCAGGCAACTTT
TGGACATCGTTGCAAGATCCCTCTATTCTGAAAAAGAGGTCTTCATTCGA
GAGATTGTGTCGAATTCATCGGATGCTCTCGAGAAGCTGCGGCAAGTTCA
AGTTACTGGTCAACAAATTTCTGATTCTGATTCTCCCCTTGAAATCCATC
TGACCACTGATGAAGAAAAGGGCCTGTTCATTATCCAAGATTTTGGTATC
GGCATGAGCAAAGATGAGCTTATCAATAACCTTGGTACGATCGCTCGATC
AGGCTCAAAAGCTTTTATTGAGAAAGCTAAGCACGAGAGCATTGACGCTC
AAAACATCATTGGACAATTCGGTGTGGGATTTTATTCCACCTTTATGGTT
GGTGATAAGATTGATGTTTTTACCAAATCTTATGAGCCAAGTGCTTCTGG
ATATCATTGGTCATCCGATGGGTCTTCATTCGAGAGATTGTGTCGAATTC
ATCGGATGCTCTCGAGAAGCTGCGGCAAGTTCAAGTTACTGGTCAACAAA
TTTCTGATTCTGATTCTCCCCTTGAAATCCATCTGACCACTGATGAAGAA
AAGGGCCTGTTCATTATCCAAGATTTTGGTATCGGCATGAGCAAAGATGA
GCTTATCAATAACCTTGGTACGATCGCTCGATCAGGCTCAAAAGCTTTTA
TTGAGAAAGCTAAGCACGAGAGCATTGACGCTCAAAACATCATTGGACAA
TTCGGTGTGGGATTTTATTCCACCTTTATGGTTGGTGATAAGATTGATGT
TTTTACCAAATCTTATGAGCCAAGTGCTTCTGGATATCATTGGTCATCCG
ATGGATCTGGCTCATACGAGATCGCCGAAGCTGAAGGCGTAACACGTGGT
ACAAAAGTCATCATCCATTTGAAATCTGATGATCGAAGGTTCTCCCTCAA
AACTACTGTCGAAGATCTGGCTCATACGAGATCGCCGAAGCTGAAGGCGT
AACACGTGGTACAAAAGTCATCATCCATTTGAAATCTGATGATCGAAGGT
TCTCCCTCAAAACTACTGTCGAAGATATAATTCGGTGCTACAGTAACTTT
GTCGGATTTCCCATTTACTTAAATGGCTCAAGACTCAACAACATTGATAT
ATAATTCGGTGCTACAGTAACTTTGTCGGATTTCCCATTTACTTAAATGG
CTCAAGACTCAACAACATTGATGCTTTATGGACGAGCTCAGAGAGGGATG
TCAGCGAAACAGACCATTCCCAATTCTATCAGTTTATTTCCAATACGTCA
GACGAACCTCGCTATTCGCTCATGTACAAAGCGGACGCCCCATTGAACAT
TCGTAGTGTTTTATACGTACCTTCCAATATCCCAGAAATGTTCGGTTTCG
GGCGTATGGAGCTCGGTGTTAGTTTGTATTCACGGAAGATTTTGATTCAA
TCGAAAGCGCAAAAGATTTTACCGGAATGGTTACGTTTCATTCGTGGTGT
TGTTGACAGTGAAGACATCCCATTGAACTTGAGTAGAGAACTCCTTCAAG
ATAGTGCTTTGATTCAAAAACTGAGTGATGTTCTTGTTACTAAACTATTA
AGGTACTTCTTAGAACAATCGCGAAAAGATGAAGAAAAATTCACGAAATT
TATGAAAGAGTGTGGAAATTATTTCCGGGAGGGTGTGGTCACTGACCAAT
CACCTTCTCGACGTGAAGATATCGCCAAATTGCTGAGATTTGAAAGTTCG
AAAGAAAGACCAGGAAATTTGAAATCTTTGATGGATTATATTTCTGGAAT
GAAAGAAGATCAAAAAGAAATTTTCTTCCTTTCTGCTCCAAGGCTTTATG
GACGAGCTCAGAGAGGGATGTCAGCGAAACAGACCATTCCCAATTCTATC
AGTTTATTTCCAATACGTCAGACGAACCTCGCTATTCGCTCATGTACAAA
GCGGACGCCCCATTGAACATTCGTAGTGTTTTATACGTACCTTCCAATAT
CCCAGAAATGTTCGGTTTCGGGCGTATGGAGCTCGGTGTTAGTTTGTATT
CACGGAAGATTTTGATTCAATCGAAAGCGCAAAAGATTTTACCGGAATGG
TTACGTTTCATTCGTGGTGTTGTTGACAGTGAAGACATCCCATTGAACTT
GAGTAGAGAACTCCTTCAAGATAGTGCTTTGATTCAAAAACTGAGTGATG
TTCTTGTTACTAAACTATTAAGGTACTTCTTAGAACAATCGCGAAAAGAT
GAAGAAAAATTCACGAAATTTATGAAAGAGTGTGGAAATTATTTCCGGGA
GGGTGTGGTCACTGACCAATCACCTTCTCGACGTGAAGATATCGCCAAAT
TGCTGAGATTTGAAAGTTCGAAAGAAAGACCAGGAAATTTGAAATCTTTG
ATGGATTATATTTCTGGAATGAAAGAAGATCAAAAAGAAATTTTCTTCCT
TTCTGCTCCAAGCCGTGAGCTAGCAGAATCATCGCCATATTACGAAGCAT
TGAAAGCAAAAGATGTGGAAGTACTTTTCACATACGAAGAAAATGATGAA
GTCGTTTTTGCTGCTCTCAAAGAATTCCAAAAGAAAAATATAATTTCTGC
GGAAAACTATTTGATGGGTTCAGATCCTCTCACTGATGACGTCATCACCG
ATCAACCCGACATTGCCGTGAGCTAGCAGAATCATCGCCATATTACGAAG
CATTGAAAGCAAAAGATGTGGAAGTACTTTTCACATACGAAGAAAATGAT
GAAGTCGTTTTTGCTGCTCTCAAAGAATTCCAAAAGAAAAATATAATTTC
TGCGGAAAACTATTTGATGGGTTCAGATCCTCTCACTGATGACGTCATCA
CCGATCAACCCGACATTGAAAAATTATCGGAAACTGAGACAAACGAACTA
ATGGATTGGATTCAAAACACACTTGGAAAAACGAAATGTCAAAACATTAA
AGAATCGAAACGCCTCGCATCACACCCTGCAATGATCACAGTGCCCGATA
TGGGTGCAGCTAGACGATGGTTGAAATTCGTCAAATCTGGCCCCAATACT
GATCTTCTGAAGATGAAATTTGAAGTACTTCAACCAACTTTTGAGATCAA
TCCCAACCACGAGATCGTCCGCTCACTGAACACACTAAAAGGAAGCAATC
CCATGCTTGCTGAACTCTTGGTCAACCAGAAAAATTATCGGAAACTGAGA
CAAACGAACTAATGGATTGGATTCAAAACACACTTGGAAAAACGAAATGT
CAAAACATTAAAGAATCGAAACGCCTCGCATCACACCCTGCAATGATCAC
AGTGCCCGATATGGGTGCAGCTAGACGATGGTTGAAATTCGTCAAATCTG
GCCCCAATACTGATCTTCTGAAGATGAAATTTGAAGTACTTCAACCAACT
TTTGAGATCAATCCCAACCACGAGATCGTCCGCTCACTGAACACACTAAA
AGGAAGCAATCCCATGCTTGCTGAACTCTTGGTCAACCAGCTTTTTGACA
ACGCGCTTATTACTGCTGGTTTGTTGGACGATCCTCGTGAAATGGTTGGC
CGATTGAACACCCTTTTGTCTAAAGTGATGACCAGATTAAATATCGAAGA
ACAGAAAAAGGATAAACAACAGACCATTATTACTCCTTGACTTTTTGACA
ACGCGCTTATTACTGCTGGTTTGTTGGACGATCCTCGTGAAATGGTTGGC
CGATTGAACACCCTTTTGTCTAAAGTGATGACCAGATTAAATATCGAAGA
ACAGAAAAAGGATAAACAACAGACCATTATTACTCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:317316..324114 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1918-2067:151 |
| Aaloc | 1609-1917:2036 |
| Aaloc | 1405-1605:2477 |
| Aaloc | 784-1401:3595 |
| Aaloc | 712-783:4001 |
| Aaloc | 601-708:4368 |
| Aaloc | 217-597:6452 |
| Aaloc | 148-216:6800 |
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