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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000295_pilon:430534..436148- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002272 ID=XLOC_002272|Name=XLOC_002272|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5615bp|location=Sequence derived from alignment at sc0000295_pilon:430534..436148- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTATTAGTTGTATTCGCTGCTCTTATTGCTTTCACTGCAGGTAG
ATATGACTGCCCAGCTGGCACACAACGTTGTTTCAACGTTTATCTAACGT
TGTATGGACGTTGTGAATGCTAGAAAAACGTTGAAACAACGTTGTGTGCC
AGCTGGGTGCTCGCTTAAAATTCTATTGCTAAAAACGTTTATAACCGAGC
CATCGAGTAAACCTGAGAAACCTTATCGGCCCTTTTTACACCAGCCCTTA
TTGGTGTTATATTTTCGTCGCTAGCGTAATGAGGGCCAGCGTAACGGATC
GAAATTAAATTAGGGCTGGGCTAAAAATGAGCTTTGGCGTGAGGGCCGTT
GTAAAAAGAGCCGATAAAAAGCACATTAAAGCTCTATTTCGGTACGGTCT
GAGCTCCAGAACTTCTATGAACATCTCTTTTTCTCAAGATTTGAAATATA
TGATGATGCTACCTTTCTTTTCAGCATGCTCTGACAAGAGTTCATATTGT
CGGTTCTTCTCTCGTGCACAATGCTCAACGAGTGCTATTGTTCGTGTGCA
ATGTCCAAAATACTGTGGAACGTGCGGTGGCAGTGGAAGTGGTAGCAGCG
GATGTAAGTGTGTTCTACTCTGAATATTTTTTCCCTCCTTTATTGTAGTT
TTTGAAATTGTTAGGTCAACCTCCCAGAGGGACCCTGGAAAGCTCGAGGT
CCTTGACTTTTTTCTAAATTCCTAACGTTTTTCCGATAAGCTGAATTTTC
CGAGTGAATTTCTGTATCGTTATCAGGATCAGGTTGCTCAAGTAATAAAG
GGCAACTTTCCTTCTGGGATCTAAAGTGGTCAGGGACTATAGCCTTCATC
ACCCAGTATAGTAGAAGGTTCATTTTCGATTTTATTTAATGCACAATTTT
AATTTGTTGTCGTATTAGCATGTCGAGATCTCTCCTCAAATTGTTACATG
TTCCGCTCACAATGTAGCAACTCTTACGTCAGACAAAGATGCCCAAAGAC
CTGCAACGCCTGCAGTGGCGGCGGAAGTGGCGGTAGTGGTGTCCCAAGTA
AGTGTTTAGAATCTCACCAAAGTCTGTAAAAAAACTCCATCTTGAAGCCT
TTTGTTTCTTTCCATTGTTTCCAACTTGAACTTGCGTTTGTTTTGCTCGT
TTGATAAAATCTCGAACCAATGCCTGTCTCGAACTTGAAAACTTGATCAA
AAACTGAGCACAAAGCGTACTATAAGGGTCCAAATGAACAAAGATAAAAA
TATTGCACTATAAGGGTGCAAAATTTGGAAAATGTTACCATATTTCGCCT
GAACACGGTCAAGAAATTGCACCGTAAGGGTCGATTTTCCGCCCAAATTT
ACTCAAATTTGGCTAAGTTTTCTCTGTACTGTAAGGGTTCGATTTCAAAG
GCCTAATTTTGGATCGAGTGCCCCCCCCCTAGGCCATGGAAATATCGATA
TAAAATCTGACTTCTTCGCCTAAACTGGAAAGAGTAGTAATACAACTGAG
TTCCACAAAAGGCTATGTTGGGGCTCTCCATAAAGCACACAAGTCAACTT
GATTCATAAAACAACCAGATCCTTGAAAAATATTCTCCATTCTACCTTTC
AAGGTTGCGCTGGCAAAGGCACTGGGTTACCATCAGGTAAGAATCATAAT
AAAATTCGAAGAACTTCGACCTAAACACGGAACGATATAATGGACTCTCT
TTGTCTTGAATACCTAGCTGGCACACAACGTTGTTTCAACGTTCATCTAA
CGTTATATGGACGTTCTGAACGTTAGATAAACGTCGAAAAAACGTTGTGT
GCCAGATGGGTATATCTCTAAGACTGTCTTTTCTCTTGAAGCATTTTATC
CAAGTCTAGCGAGTTGAAATGAAACAAGTCTCAATATACTTGCAAATAAG
TTCACATACTTTCGAAGAAGATGAAATAACTGATAACTTCTGTCTATGGG
TATATTTCTACTCAAATTTAGGTGCACCATGCGGTCAAGTCAAAGTCAGT
TCATCAAGAGTCATTGCTGGAGAGAACGCAAAAGCTGGAGCATGGCCATG
GCAAATTGCCATGACAATGAAAGATGGGCGTTTTTTCTGTGGAGGATCTT
TGGTCAACGCCAAATGGGTGGTCACTGCATCTCATTGCATCGATAAACAA
CAAGCTTCCAATATCCAAATCGTCTTAGGTACATGATGGTTCTTTTCTAA
GTAATCTAACAACTTGTGAATAGCTTCGAACAGCCGCGCTTTTTAAAGTC
TTACATCACGTGACAATGAAGCACCAAAAGAACAATAATAAATTCATTTA
TCGTTTGGTTATCTTTACAACAGAGTCCCATGTGATATATAGTCTTAACT
TTTTAATAATGTCGAGGTCGAGATTTACAGAGAAAATCCGTGATTAGTTG
CTTAAAAATGGTGAGTTTTTATCTGAAGCAATATACCACTAAATCTCAAG
ATACAAAATGAAAAGGTATTTTGGAAGAACACGTGCTTTCTACAGGAAAT
TAGTACAAGCCAAAACTCTCATCCTTAAAAAGCAATCTTTTCGTTACAGG
CGGTCACGATTTAAACCATCCATCTGGTAGCGAACAAACTCGAAATGTGA
AACGGCTTATTATGCATCCTTCATACGGACGCTTGAACAATGACATTGCA
TTGATCGAACTCGACCGTCCAGTAATGTTCACTGATCGTATACAACCTGT
GTGTTTACCAGAGCCTACAGAACAACCAGCTGTGGGAAGCAAATGCTACT
TGACTGGTAAGAATCTCTTTCCATTAAACCTTTCGTCAAAGATTATAACA
TCCCTGTCTAACATGCCGGAAAAATTGTAAATTTTTCTATTTTAAGGAAT
GACAATAAATAATTATTTTGGAAGCTACGCGTGAAAAAAATAGAGAAGAA
TTTAGTTACGATATTCAGGCATGTAAAATACGCGTTAATGATTAAGGAAA
TTTAAGTCTGAAATTTAAATCTAAGTTTTAATGTCAAAAGGCTTGCTATG
CGCTATAATTTAATAATGCAAAACTTAGCCCACGTCTCAATATAGTAAGA
TTAATTGGGTTTTTTTGGAAGAATACGCTTTAAATTAAAAAAAATTACAA
TATCTTGTCTGATTTATTCCTTTTTAAGGTTTTGTATTGCTTTTGTGTTC
ATTACGGGGTTATAGGGTATCTTTTGGCTAATGTTTTTATTTCTCTTCTG
TCACGCTTTTTTCACATAAAATTGAGGAATGATAGAATTTGTTGGACCTA
CCTGGAGGTCCTATAAATTAACATTTGTCCGTCCGTCCGTCTGTTACCCT
GCTTTTCTCGAGATTGGCTCATTTATTTTTTCCGCATTTTTGCACAAAGA
TGTGTATTAGCAATGCCCAAAATGTAGCCGGTTCAGATTTTGAGAATTTT
TTTTTCCGACCGGAAATCTTTCCGGAAACGCCGGAAATATGCCGGAAATT
CATTGAACTTTTTCTTAATATTTCCTTGTTTTTCACACAAAAATATCATT
GATATCAATGCCCACCATCAAGCATGATTTAATTGTCAATAAAACTGATT
TTTGAAGCCGGAATTTTCTAAAAATCGTCGGAACAGCCGAGAATTGCCGG
AAAAACGGTTTCTCTTGAATTTCTTGAGCTGTATTTTATATTATTGATAA
AATTTTGCACACTGATTTTTGAGAAGAAAAAAAATTCCGCCCAAAAATGC
TGGAAATATGCCGGGAAAACCGGCTTTTTGGCATTTTCTAGAGATTTCAT
CATTTGTTTTTTTCTGAATTTTCGAACTAAGATGTAAATCAGCAATGCCT
AAAATATGACCTAGTCCGATTTTCGATGGAAATTTTTTTCTGGCCGAAAA
TGACAGAAATATGCCGGAAATCACCGTTTTTGCAGATTTCATTGGATCTT
TATAATTCATATTTTTGTTTTTCAAACAAAAGCATTATAATAAAATGCCC
ACGATTCAGTATGGTTCAATTTTCAATGAAACTGATTTTGGTAGCCGGAA
CAGCCGAAGATCACTAGGAAACCGTTCGCTCGTCCGTTCTTTTTTCACGA
TCTTTTCCATCATCGCTTTAAACTACAGTCGACTTTCCATAACTTGAACC
TCCTCAATTATCTCCATAAACTCTAACGATTTTTCCGGTCTCTTGAGAAG
ATTCTTAGACTATTCTGCCTCTCTATATCTCGAATTTCCATAACTGGAAC
AATTACTGATTATCCCCTTGGCGTTCCAGCACTCGACTATATTACACTTC
CCTACTTGCTCTAAATATATATTCATCAGGTTTGTCCAATCAGCGTTCCG
GCTTGTTTTTTTTTTTGGTTTAGTCGATTGATTGTACATTATTTTATAGA
TTTTTTTTTCTGGTTTTGACAAGTTTTTGGTTTGTTGGGTTTGAAAATTT
ACACACGTGTATGAAACACTCAAAAGGAAAACTCGTTGTTATCGAAACAA
TTTTTTACCTACTATGGTCAGAGCCATTTTACAGAATGAGTCGTCTTATT
TTGTGAATAAATACATATTCTTGATCTAAACTGATAAATAATTTTCAGGG
TTAACGAGAAGGAGAGATGACTGAGTGGTCTGTGGTATCAGACCTCAACC
ATTTTACCGAAATATCATGGTTATTTGAAAAGAGAATTTGATAGATTCAG
CATCGCCTTTTATAAAGTTTTTAAAATAGTTGTATCTATTTCGAGTAGAA
CTTTCTTGGAGTGTTATTGTTTGAGATGCCTTGTAAACTTTTTATAAGCT
TTTGAGGCTGAAATTTGTAAAAAGATCTTGAGAAATTATGTACTGAAAAT
GAAATCAATGAGACAGGGGGGTATACAACGAATAGAAATTGAAAATAATC
TAAGGCTGAAAATTAAATTTTGCTAAGTATGACGAGCCTCAGTTTTAATT
TCCCGTATGCTTCTAAACCTTGTGGCTTGTTTCTATGGCGGTGGTTAAGC
AGAAAATGGCACTCTCATCGGAGGTTTTTTATTTTTTGGCGAGCCTTCTT
CATAAGTTTTCATCTAGGAGAAAATGCAAACGAGAGAAATTTTGAACTAT
GAAAATTCATTGGAAGCAGTCCCAAGCCATGGTTTTTCAAAATTTATTTT
TTGATAGCAGCACCTGAAAAGTCTTCAAGTAGTGCCCATTCTCCGAGGGA
ACTGCTGCGGAGGACACTGACCACTCCCATTACACCTTCACAAAACCATG
ACAAAATGTTTTAACTTTATAAAAGATTTAAACAAGACTAGTAATGATGC
TGATAAGACTCATTCATTTTTATTTAACAACAGGCTGGGGAAAGATTCAA
CATCCTGGAAGCTCACATCCAATCCTTCAACAAGTTGGCTTAACTATACA
AGAAAATTCTCAATGTAACAGATTGAACTCAAAATACGTCCCCATCTCAC
AACAAATGGTATGCGCGGCCAACCCAGGCACACGACAAATGGGTTGTCAT
GGTGACAGCGGTGGCCCACTTGTCTGTCAACAGCCAGATGGTAGCTTCAA
ACTTCATGGGGCTGTCAGTTGGGGCTCACCAACATGTACGGCTAGTGACG
CTTGGACTGTTTTTGCTCGTGTCTCCGTTTTCCGTAATTGGTTAAACTGC
TATATCAACAACTAG Coding sequence (CDS) from alignment at sc0000295_pilon:430534..436148- >XLOC_002272 ID=XLOC_002272|Name=XLOC_002272|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000295_pilon:430534..436148- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTATTAGTTGTATTCGCTGCTCTTATTGCTTTCACTGCAGATGA
AGTTATTAGTTGTATTCGCTGCTCTTATTGCTTTCACTGCAGCATGCTCT
GACAAGAGTTCATATTGTCGGTTCTTCTCTCGTGCACAATGCTCAACGAG
TGCTATTGTTCGTGTGCAATGTCCAAAATACTGTGGAACGTGCGGTGGCA
GTGGAAGTGGTAGCAGCGGATCATGCTCTGACAAGAGTTCATATTGTCGG
TTCTTCTCTCGTGCACAATGCTCAACGAGTGCTATTGTTCGTGTGCAATG
TCCAAAATACTGTGGAACGTGCGGTGGCAGTGGAAGTGGTAGCAGCGGAT
CATGTCGAGATCTCTCCTCAAATTGTTACATGTTCCGCTCACAATGTAGC
AACTCTTACGTCAGACAAAGATGCCCAAAGACCTGCAACGCCTGCAGTGG
CGGCGGAAGTGGCGGTAGTGGTGTCCCAACATGTCGAGATCTCTCCTCAA
ATTGTTACATGTTCCGCTCACAATGTAGCAACTCTTACGTCAGACAAAGA
TGCCCAAAGACCTGCAACGCCTGCAGTGGCGGCGGAAGTGGCGGTAGTGG
TGTCCCAAGTTGCGCTGGCAAAGGCACTGGGTTACCATCAGGTTGCGCTG
GCAAAGGCACTGGGTTACCATCAGGTGCACCATGCGGTCAAGTCAAAGTC
AGTTCATCAAGAGTCATTGCTGGAGAGAACGCAAAAGCTGGAGCATGGCC
ATGGCAAATTGCCATGACAATGAAAGATGGGCGTTTTTTCTGTGGAGGAT
CTTTGGTCAACGCCAAATGGGTGGTCACTGCATCTCATTGCATCGATAAA
CAACAAGCTTCCAATATCCAAATCGTCTTAGGTGCACCATGCGGTCAAGT
CAAAGTCAGTTCATCAAGAGTCATTGCTGGAGAGAACGCAAAAGCTGGAG
CATGGCCATGGCAAATTGCCATGACAATGAAAGATGGGCGTTTTTTCTGT
GGAGGATCTTTGGTCAACGCCAAATGGGTGGTCACTGCATCTCATTGCAT
CGATAAACAACAAGCTTCCAATATCCAAATCGTCTTAGGCGGTCACGATT
TAAACCATCCATCTGGTAGCGAACAAACTCGAAATGTGAAACGGCTTATT
ATGCATCCTTCATACGGACGCTTGAACAATGACATTGCATTGATCGAACT
CGACCGTCCAGTAATGTTCACTGATCGTATACAACCTGTGTGTTTACCAG
AGCCTACAGAACAACCAGCTGTGGGAAGCAAATGCTACTTGACTGGCGGT
CACGATTTAAACCATCCATCTGGTAGCGAACAAACTCGAAATGTGAAACG
GCTTATTATGCATCCTTCATACGGACGCTTGAACAATGACATTGCATTGA
TCGAACTCGACCGTCCAGTAATGTTCACTGATCGTATACAACCTGTGTGT
TTACCAGAGCCTACAGAACAACCAGCTGTGGGAAGCAAATGCTACTTGAC
TGGCTGGGGAAAGATTCAACATCCTGGAAGCTCACATCCAATCCTTCAAC
AAGTTGGCTTAACTATACAAGAAAATTCTCAATGTAACAGATTGAACTCA
AAATACGTCCCCATCTCACAACAAATGGTATGCGCGGCCAACCCAGGCAC
ACGACAAATGGGTTGTCATGGTGACAGCGGTGGCCCACTTGTCTGTCAAC
AGCCAGATGGTAGCTTCAAACTTCATGGGGCTGTCAGTTGGGGCTCACCA
ACATGTACGGCTAGTGACGCTTGGACTGTTTTTGCTCGTGTCTCCGTTTT
CCGTAATTGGTTAAACTGCTATATCAACAACTAGGCTGGGGAAAGATTCA
ACATCCTGGAAGCTCACATCCAATCCTTCAACAAGTTGGCTTAACTATAC
AAGAAAATTCTCAATGTAACAGATTGAACTCAAAATACGTCCCCATCTCA
CAACAAATGGTATGCGCGGCCAACCCAGGCACACGACAAATGGGTTGTCA
TGGTGACAGCGGTGGCCCACTTGTCTGTCAACAGCCAGATGGTAGCTTCA
AACTTCATGGGGCTGTCAGTTGGGGCTCACCAACATGTACGGCTAGTGAC
GCTTGGACTGTTTTTGCTCGTGTCTCCGTTTTCCGTAATTGGTTAAACTG
CTATATCAACAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295_pilon | genome | sc0000295_pilon:430534..436148 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 757-1086:331 |
| Aaloc | 550-753:3065 |
| Aaloc | 343-546:3643 |
| Aaloc | 310-339:4011 |
| Aaloc | 298-306:4579 |
| Aaloc | 178-294:4696 |
| Aaloc | 49-174:5140 |
| Aaloc | 1-45:5616 |
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