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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000417_pilon:20236..21632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002266 ID=XLOC_002266|Name=XLOC_002266|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1397bp|location=Sequence derived from alignment at sc0000417_pilon:20236..21632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTCGTACACGTTTTTGTTCTTTTGGTGGTTTTCGTCAACAAAAT
CGAATCAAAATGTGACGCACTCACTCGATCAGTTAACGGTCAATACAATT
CAAAATTCATTTTAAATTTGGGAGATGGATTTCGTTCAACAGATTTAACG
ATCAAGTTCGTTGACGTTGTACAGAATGTTGATGCTTCGCATAGTAAAAC
ACCGAACGCAAAGAGTATTATAGATGGAGGGAAAACTTTCAAAATAACAG
GTGGCTTCTCACAAAGAAGAATTGAAGTTCACGTCAAGGGTTACAACACT
AAACTTTCATCAATCGAAGCAACAGGGATCGACTGCAACTTTGAAGGAAA
ACAATGTAAATCAAGTGACTTTGGTGCAGCAAAATGTGAAAGAATGCTTC
GAGAAAGGACTATTGAGCAAGGAAAGATTCAAAGTGGAATTTGGTTCACA
AGCGGAAATGATTTTCGCTTTGGTGCAAAATTGACGGTAAGTTAGTGTAA
AAAATCAACTAAAACCTCGCCAGCATTGATATAACATCAATAGTTTCAAA
CGAAACCAAAATCCTTATTTTCACTTTTAATTTTTAGTTTGGTTTTGAAA
CAGCTGTCCCAGACTTTCACGCATGGCAAGGGATCAACAGACTCTATGAA
AAACCACAATGTCAAAATATTTTCCACTTTCAATCACAACAAGGAATGGT
TGCTGGAGTATCTCGACTTTCTGTCAAATTTCATTACTCGCCACCTGGCA
AATTAGTTTACATCGCTTTTGGGGATGTAGAATGTCTACAAGTGTGTGGA
ACAAAACCAGACTGTCTTCTTCCAACAACGCCTACAACAACAACCACTAC
GACCACAACAACTACAGAAGAACCCAAAGTAACCACAGAACCCGAAGTAA
CCACGGAAGAACCCGAAGTAACAACGGGAGAACCTGAAGTAACCACAGAA
CAACCTGAGGCCACCACAGAACAACCCGAGGCCACCACAGAACAACCCGA
AGTAGCCACAGAACAACCCGAAGTGATCACGGAACAACCCGAAGTAACAA
CGGAACAACCCGAAGTAACAACGGAACAACCCGAAGTCACCACGGAAGAA
CCCGAAGTAACCACGGAACAACCCGAAGTAACAACGGAACAACCCGAAGT
AACAACGGGAGAACCCGAAGTAACCACAGAACAACCTGAGGCCACCACAG
AACAACCCGAGGCCACCACAGAACAACCCGAAGTAGCCACAGAACAACCC
GAAGTAACCACGGAAAAACCCGAAGTCACAACGGAAGAACCCGAGGTAAC
TACGGAAGAACCCGAGCAAGCCACGGAATCAACACCTACGACAACCACTC
GAAGAAGACCTATCATTGCCGTCTTAGAGGATTTCGAAGTGAATTAA Coding sequence (CDS) from alignment at sc0000417_pilon:20236..21632- >XLOC_002266 ID=XLOC_002266|Name=XLOC_002266|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1962bp|location=Sequence derived from alignment at sc0000417_pilon:20236..21632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTCGTACACGTTTTTGTTCTTTTGGTGGTTTTCGTCAACAAAAT
CGAATCAAAATGTGACGCACTCACTCGATCAGTTAACGGTCAATACAATT
CAAAATTCATTTTAAATTTGGGAGATGGATTTCGTTCAACAGATTTAACG
ATCAAGTTCGTTGACGTTGTACAGAATGTTGATGCTTCGCATAGTAAAAC
ACCGAACGCAAAGAGTATTATAGATGGAGGGAAAACTTTCAAAATAACAG
GTGGCTTCTCACAAAGAAGAATTGAAGTTCACGTCAAGGGTTACAACACT
AAACTTTCATCAATCGAAGCAACAGGGATCGACTGCAACTTTGAAGGAAA
ACAATGTAAATCAAGTGACTTTGGTGCAGCAAAATGTGAAAGAATGCTTC
GAGAAAGGACTATTGAGCAAGGAAAGATTCAAAGTGGAATTTGGTTCACA
AGCGGAAATGATTTTCGCTTTGGTGCAAAATTGACGATGAACTTCGTACA
CGTTTTTGTTCTTTTGGTGGTTTTCGTCAACAAAATCGAATCAAAATGTG
ACGCACTCACTCGATCAGTTAACGGTCAATACAATTCAAAATTCATTTTA
AATTTGGGAGATGGATTTCGTTCAACAGATTTAACGATCAAGTTCGTTGA
CGTTGTACAGAATGTTGATGCTTCGCATAGTAAAACACCGAACGCAAAGA
GTATTATAGATGGAGGGAAAACTTTCAAAATAACAGGTGGCTTCTCACAA
AGAAGAATTGAAGTTCACGTCAAGGGTTACAACACTAAACTTTCATCAAT
CGAAGCAACAGGGATCGACTGCAACTTTGAAGGAAAACAATGTAAATCAA
GTGACTTTGGTGCAGCAAAATGTGAAAGAATGCTTCGAGAAAGGACTATT
GAGCAAGGAAAGATTCAAAGTGGAATTTGGTTCACAAGCGGAAATGATTT
TCGCTTTGGTGCAAAATTGACGTTTGGTTTTGAAACAGCTGTCCCAGACT
TTCACGCATGGCAAGGGATCAACAGACTCTATGAAAAACCACAATGTCAA
AATATTTTCCACTTTCAATCACAACAAGGAATGGTTGCTGGAGTATCTCG
ACTTTCTGTCAAATTTCATTACTCGCCACCTGGCAAATTAGTTTACATCG
CTTTTGGGGATGTAGAATGTCTACAAGTGTGTGGAACAAAACCAGACTGT
CTTCTTCCAACAACGCCTACAACAACAACCACTACGACCACAACAACTAC
AGAAGAACCCAAAGTAACCACAGAACCCGAAGTAACCACGGAAGAACCCG
AAGTAACAACGGTTTGGTTTTGAAACAGCTGTCCCAGACTTTCACGCATG
GCAAGGGATCAACAGACTCTATGAAAAACCACAATGTCAAAATATTTTCC
ACTTTCAATCACAACAAGGAATGGTTGCTGGAGTATCTCGACTTTCTGTC
AAATTTCATTACTCGCCACCTGGCAAATTAGTTTACATCGCTTTTGGGGA
TGTAGAATGTCTACAAGTGTGTGGAACAAAACCAGACTGTCTTCTTCCAA
CAACGCCTACAACAACAACCACTACGACCACAACAACTACAGAAGAACCC
AAAGTAACCACAGAACCCGAAGTAACCACGGAAGAACCCGAAGTAACAAC
GGAACAACCCGAAGTAACCACGGAAAAACCCGAAGTCACAACGGAAGAAC
CCGAGGTAACTACGGAAGAACCCGAGCAAGCCACGGAATCAACACCTACG
ACAACCACTCGAAGAAGACCTATCATTGCCGTCTTAGAGGATTTCGAAGT
GAATTAAAACAACCCGAAGTAACCACGGAAAAACCCGAAGTCACAACGGA
AGAACCCGAGGTAACTACGGAAGAACCCGAGCAAGCCACGGAATCAACAC
CTACGACAACCACTCGAAGAAGACCTATCATTGCCGTCTTAGAGGATTTC
GAAGTGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000417_pilon | genome | sc0000417_pilon:20236..21632 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 829-981:154 |
| Aaloc | 487-825:811 |
| Aaloc | 1-486:1398 |
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