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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:846979..852871- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002205 ID=XLOC_002205|Name=XLOC_002205|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5893bp|location=Sequence derived from alignment at sc0000018_pilon:846979..852871- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTTAACAAATACAAATGGTATCTTTTTCAATGATGTCTCAAAACT
CTGTGTATTGGAGCCTGAAGTGAACCAACAGACTCATGAACTCAAAACAG
AATGTAAAGATTTTGTTGAGAAAATATCCGAGTTTCAAGGTAAGATGGTT
GTCACCAGAAATTCTTATTGATTTTTATGTTATTATGTGGTAGAAACTTT
CCATCCATGTGTTTCGAAATCTTGCTAAATGAACAAAATAGCTGTAAAAT
GTTCAAAATAACTTCATGTGGAGGATACTTGAATATCTTTATAACCTCTA
GTTGAAAATTTCAATCTGAGTTTGGATTGATCCTTGAAAAAAGGATGCGT
GTAATCACAGCGCAAAAATTTCTCTATTACTATTTGCTACTATATTGAAT
GCTCTTGACGGTCTTAGCCCTGCTCGCAGAGTGGATAGTATGTTTCCCAT
TGTTTCTTGCCTACTAACGGCTGATAATTGCGAAATCGTTAAAAAGGAAT
TGTTCTTAACTTGTTCTTACGTTGAAATTCGAAAAGAGGCTTTACTTGGT
ACCATGAGGTTATCTTCATTCTAAAAATCTTTGATTACACCATTTTTTGG
GTCAGGCCTAGCACAGGAAAAAATTTTCGATTTCCAAGGTTGGAAATTTC
AAGTTTTCTTAGTTGGAAAAAAGATAAAATCCAATGGAAAATCCAACCTG
AAAATGTGGGACATTCTCCAAGGTTGAAAATTTTGCATTTTCCATGGCTT
GGAATTTTCGTAAATCCAGGTTGAAAAAAGCCAAAATCCAAATTTAACAA
GGTTGGAATTTTCGTAAATCCAGATTGAAAAAAGCCAAAATCCAAATTTA
ACAAGGTTGGGATTTTTTAAAATTCAGTTGGAAAAAAAGCCAAAATCCAA
GCTTAAACAAGGTTGGAATTTTCGAAAATCGGGGTTGAAAAAGCCAAAAT
CCAATGTTTATGTTTATGTTTATGTTTCTTTTCTTTAAAGTTGATGCAAA
GTAGTACAATGTGTACTTAGCTCGAGGCTAATCAATATCAACTATTAATT
ACAAATCTATCTAGAATGTTGATACTCAAGATCAACTATTATTTACAAAT
TAATTTAAATTCAATCAATGAAACCAACGCCATGGATAAAAGTGCGACAG
TTTCGGCAAGGACAAGTAGTGGGCCTCCATTGCTTGATTTCTTTTTTAAA
TTCATCTAGGTTTTTAAGTTTTTTAAAGTCATCGGGAAGGGTAGCCCAGA
TTTTAGGTCCCAGGAAAGCTAAAGACGATTTTCCATTCATTTCACTTTCA
ACTACTCTACTACGAAAGGAATTCCTTTTTCTCGTTTTGATCTTACATTG
GTTTTTGAGAAATATCTTACTTTCTGATTCATTGAGTTTTGATTTAAATA
GCTCTGTGGATAAGGATTGAATTGCTCGTTGATGGAAGGTGGAACCGTTG
TCAAGTTTCAACAGATATCGAATGATGAGTGTAGTCTGAGTAAACGATTC
TCAAGCATCTTTATGTAGATTGTTTGATTTTATCCTCTAGAGCTCTGCTT
GAAACATCCAATGAGAGGACAGTAATTGAAGTGGCATTTAATGAAAGCAT
TCATCAAGCGTTTCTTTTTTTCTAAAGTGAGATATGTGCTCATTCTGGCT
AAGGCGGTTTATTTTCAAACTAGCTTTCTTGCAAAGATTTTCTATGCGAT
TCAAACGTCAAAAGATTATCGAGGTTACTCCAAGAATCTTTGACGTTTTG
GTATTGAAAACAGTTTCTTCTCTAATATTTAGATAGAGCGAGTCGTCAAT
GATGTTAACTATTAGCTGACATTTGTCAGCATTACCAACCATTTGATTAA
TCGAAAGCCATGTGAAGATTTTTTCTGCTATAGAGCTTAGTTTACCACTT
ACTTCAATCCAGGTAGGAGCACTAACATAGGGTGTCGTATCGTCCGCATA
ATTCGCAACCTTAGTATCCTCAATGATGAAAAAGAGGTCACAGATATAAA
TATTGAAAAACAGAGGGCCAATGATTGATCCCTGGGGAACACCATCCTTG
ATCTTGATCCAGTTACTCAGTTCGTTGCCTACTTTTGTCCTTTGTTGCCT
ATTTTCTAGATAACTCTTGACTAACCCAGTGGAAAGGTCATCGAACTCGT
ATGCACTGATCTTTGCTACAAGTAATTTGTGGCCTTAGAAAGGTCGATGA
GCAGTGCCCCAAAAACATCTTTTTTGTCATTGGCTAGCTTCCAGAGCTCT
TCCATTGGGAGAAGAGAGGTTTGAGTGGAATATCCTTTCCTGAAACCACA
TTGTTGTTCATCAAAGTAGTGCTCAAAGTATTCTGATATTTGATTGTGAT
ATACTCTTTCGTAAATTTTGGATATTACCGGCAGTATACTTATTGGTCTA
TAGTTACTTTTATCGTTTTTAGAATTTTTCTTGTAGACTGGGGTGACTGT
CGCGAACTTGGAAATGTTGGGAAAAATACCTGAGCTGAAGGAGTCATTTA
TGCTTATAGAGAAGCAGCTTGCAAATAAGTGAGTATTTTTTTTAATTATT
TCGCTGGTATATCATTTTCCGCTTGAGACTTATTTGTCTTAAGGTTACTA
ATTATTTTCTTCTCTACTTCGTCTTCGGTGGTGTTTTCTTTAAACTTGAA
GGAGTTTCATGTTTGATACCTTTTCTTTATTTTTGAGTATACTAGGGTGG
TTTCTAAAAAGCATTATTTCATTTTGAAGAATATTATCCGAAAGTTCATT
GAGAGGCACTGGTTCTGTTGGTGGTTGATTGAGATCTAATTTTTCAGTGA
TATTTATGAAGAACTCATTAAACATTTTTCCAATTTCTTTATCATCTTTA
ATCAGTTCATCATTTTCGACTAAGGTTATTTTTCTCACTTATTGGTCCTT
TATTAGAGAAAAAGGGCGCACAGTTTTCCAAAATCTTTTATTGTCAGTGA
TTTGCTTTTCATCCAGAGATTCAATAAATCTTCTTTAGTGTTTCTCAGGA
GATATAAGCATCGGTTTCGCTGTTGGTTGTAATTATATTGTTAATGTTAG
AGGGTCTTTTCGTTTAATGTTATTAAGTCGAGATCGATGCATCATGGCCT
TTCGTAGTGATTTTGTCATGCAAGGTTTATCATTACCCACTCTTAGTATT
TTAGTTTTTATCGGTGCTTCAGCGTTTAGAAGATTTACTACACTTTTCAT
TTATGTTTTCAAAGTTGCGATTTGACTCAAGTACTTGTGTTAAATGATTT
TTGAAAAGATCTTCGTTAAGATTTTTTAGCATCTATATTTAAATGGCTTT
AGGTGACACTTTTCAAAAGTGGTTTTAAGACGCTTATTGTGATGTTGTGA
AAGTCCGATAGGCTATTAGATACAGAGGAAGAGCCCTGAAAACTTCTTTG
GTAATTTGTTAGCGCAGATCAATGCATTTTGGATTTTCTGCGTTTTTTGA
AGCACGTAGTTCATTATCAAGCTAGAAAGCTCCCTGCTAGCAAGAAACTC
AGGCATTTTATGTTTGTCGATTTCACAATTGAAATCCCCCAGTAGTAAAA
GTCGGTCATGATCTCCTATAGAATCAAGGCTATTTTGTAAAAGCTCTAAA
TGTGAATTTATATTGTCTACATGCGGATTATAAGAGCAACCCAGTAGCCA
TTTTTGCTTCTTCAGATTGACCTCGATGAATATAGCTTCATAATTCTTGT
CTTTTAATACGAGTTTAGAAGGAATGCCTTGACGTACGTAGAGTAGAAGA
CCTCCTCCCTGTTTGTCCCTGTCCAAGCGATATGGACGCGAGTAGTTTTC
AATAATGAAATGATTTTCAGGAAATGATTCGTCAATCTTAGTTTCAGATA
CCAAAAAAATGTCTACGTTATCTTTGATAACTAATTTGAGACCTTCAAAT
TTGTATCTTATTTCGTTTTTTGAGTTTCCCCGAACGCGATGTACCCATTC
AGTATCGTCTAGGTTCAGATTATTTGCTTTATCCAGCCATTCCTTTAGAA
CTGCTCTTTCAGTTCGAGTTAGGTTGGAATTTTTTTAAATTCAGGTTGAA
AAAAGCCAAAATCCAGGCTTAAACAAGGTTGGAATTTTCGAAAATCGAGG
TTGAAAAAGCCAAAATCCAAATTTAACAAGGTTGGAATCTTTTAAAATTC
ACGTTGAAAAAAGCCAAAATCCAAATTTAACAAGGTTGGAATTTTCGTAA
ATCCAGGTTGAAAAAAACCAAAATCCAAATTTAACAAGGTTGGAATTTTT
TAAAATTCACGTTGAAAAAAGCCAAAATCCAAAAAGTGATGGCAGAGATG
TGGAAAAGAGATCTTAAACAAGGTTTTTGTTTTTGTGAACAGTCACTCGC
TAGCCTAGGCTCGATGGCTCCCGGTCAATCTCTCGTTATTGTTCGCACAG
ATACGTGGTTGATCTTAGATCACTCACACAGCTCAGCAGGGCGCTATTTG
AAACTATGACACAAGTACCCTATTGGCTTCACTGTGCGAACTCACTGCGA
TTGACCGAGGCCGCTCCGAAGAGACGCCTCACCTGACGGAAACTTACAGC
TTGACTGCTCACATTATAGCCTAATATCTAGGTTAGCTATATATCAAAAC
AGTTTTGAGCGAAAAATCGCTTGTGGTTTTCCCAAGGACATGCGCAGAAA
ATGGTTAGAAAAACGTAATTTCCACATGGATTTTTAACGTTTTCCAAACT
GTTTGGAGAAACACAAATTTCCAACCCAAAAAGTCTAGTTTCCAAGAAAG
GGCTCAATCTTAGAAAAATGTAATTTCCACATGGATTTTTAACGATTTCC
AAACTGTTTGGGAGAAAACAAATTTCCGACCCAAAAAGTCTAGTTTTTTC
AACTTGAGGTATCAAATTTACTAAATATGTATTTGACATCGATTTTGACC
TATTTTTCAATTCCCAAACTGTTTGGAAAATAAAAATTTCCCACCCAAAA
AGTCATGTTTTCCAACCAGCCTTGGAAAATTGTCATTTCTACATGGGTTT
TTTTCACTTGATTTTTCAAGGGCATTGGTTTATTCTACAAAACCTATGGG
TAATTTACGTTTTCCAAATCAGCTTAAGGTAATCGCTCAAATTTCCAACC
TTCAATTATAAAACCAAAATTTCCAACCCAAAAATATTGAATTTCCAACC
TTGGAAATCGAAATTTTTTTCCTGTGTAGTATTGCTTAGCATTCCAGCTC
CTTTTCTGAAAGAATTTGCTTTGACCACTATATTTAAACTTTTTGGGCCA
AGGGCTATCCATTACTGTAAGTTGGTCTAATCTCGACATCCCTCTTCTAA
TTCCGACACCCTTCTTTAAGAGACATGAATAATATGAAAGCTTGAATCAC
TGATTGAAAAAGGATTATTCCTCTCTGACCACTAAGCAAAGAAAAACAGC
TTTGACCTTTTATCAATTTCAGCTGATAAAAAGGGTGTCGGAATTAGATG
AGGGATGTCGACATTGGACTGAGTTACGGTACCATGGTATTATTCTCTAA
ATAGCATTTACTTTTTAAAGATAAGATAGTGAAAGAAATTTGAAAATTTC
AGGGTTTAAGCTTTAGCAACACGGTACAGTTTTAGCGCAAATCGCCAAGA
AAAAATGTGTATCTCTTTTAATAACTTTTCCATCCTTAGGTATTGTGGGT
GGTTTTATATCAGTTGTTGATGGTTTAGCAAAAGGAGTCGAGAAGGAAAA
AATGAAAGCGATAGGAGCACGAAATTCACTCAAATCGATGACTAAACAGA
GAGAAGCCCAACAGCAACAGTTGAGAGCTCTTATTGCAGAGAAACAAACA
CAATTAGAGCGATTTCGACTTCAGTATGAATTATTATTGAAACAAGAGGC
TGAACAGAATGATTTTATCGAACAATTCATGATGCAAAAGTAA Coding sequence (CDS) from alignment at sc0000018_pilon:846979..852871- >XLOC_002205 ID=XLOC_002205|Name=XLOC_002205|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=786bp|location=Sequence derived from alignment at sc0000018_pilon:846979..852871- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTTAACAAATACAAATGGTATCTTTTTCAATGATGTCTCAAAACT
CTGTGTATTGGAGCCTGAAGTGAACCAACAGACTCATGAACTCAAAACAG
AATGTAAAGATTTTGTTGAGAAAATATCCGAGTTTCAAGATGACTTTAAC
AAATACAAATGGTATCTTTTTCAATGATGTCTCAAAACTCTGTGTATTGG
AGCCTGAAGTGAACCAACAGACTCATGAACTCAAAACAGAATGTAAAGAT
TTTGTTGAGAAAATATCCGAGTTTCAAGGTATTGTGGGTGGTTTTATATC
AGTTGTTGATGGTTTAGCAAAAGGAGTCGAGAAGGAAAAAATGAAAGCGA
TAGGAGCACGAAATTCACTCAAATCGATGACTAAACAGAGAGAAGCCCAA
CAGCAACAGTTGAGAGCTCTTATTGCAGAGAAACAAACACAATTAGAGCG
ATTTCGACTTCAGTATGAATTATTATTGAAACAAGAGGCTGAACAGAATG
ATTTTATCGAACAATTCATGATGCAAAAGTAAGTATTGTGGGTGGTTTTA
TATCAGTTGTTGATGGTTTAGCAAAAGGAGTCGAGAAGGAAAAAATGAAA
GCGATAGGAGCACGAAATTCACTCAAATCGATGACTAAACAGAGAGAAGC
CCAACAGCAACAGTTGAGAGCTCTTATTGCAGAGAAACAAACACAATTAG
AGCGATTTCGACTTCAGTATGAATTATTATTGAAACAAGAGGCTGAACAG
AATGATTTTATCGAACAATTCATGATGCAAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:846979..852871 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 142-393:253 |
| Aaloc | 1-138:5894 |
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