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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:574411..579779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002203 ID=XLOC_002203|Name=XLOC_002203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5369bp|location=Sequence derived from alignment at sc0000018_pilon:574411..579779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTGCATTTCTTTACCCTAACGCTTGCCAGCTCTCCCCGAGAGTCTC
AAAAAGCGGTCGCGAACAAACGCCGAATCACTTTTCCATTTCCATTTCCA
AGATGGCGGCGTCCGTAGCTCGTCCGATGAGAAACCTTTTCAATTACTTG
AAGAACGCTTGGGATAGAGAGCCTATTATTGTCGTTTCGTTTGCTTTCGG
TGGCTTTGGTAAGTCATGTTTATTTTCTTTTTATATATTTCAAAGATGAA
TTTGGAATAAACTGCAACATAACATACAAAAGGCTCTGCGGTTGATGCCA
CGCAAAGTTTTCACTTTCTTTCTGCTTCTGTCGCTGCTGGTCTTTCCGTC
AGTCAGCAGGGAAAAATCGTCCAAGAAATTGCCAACTCACATTCTATCAT
GTAAAAATTCTTTAAGCTGGAGATATGAGGGAGGTCAGTCGAAATTTCAA
ACTCCTTTTGGGCCATCCAAGAAAATTTTTGTTACCCTGTCGGACAACGT
GCACTTTTTAATTTTTTCTAGCCTCAGAAATAATTTTTCTTTTCCAGTGG
TGTGGTCTGAAATATCAATGAAAATCCATGTACTTTTGCAAGATGCATCG
GAAATCCCATTCGTTTTTGCCTTTTTTTAAGGCGGGCATCACAAATAACT
TGTGTTCGCGTCGTCCGACCGGCTGATGATTTTTCCTAATTTTCCGACTT
TTTTGAGTTGGAAAGTTGGAAAAACGTCAGATTTTTATAAGTATAATATA
GTCCCAGCTTTATCCCACTTTTAGTGAACCTTCCTACAGTGAGGCTGGAA
CTTCGATTTTTGAGGATTACGATTTTACCAGCTTTTTAGCAATTTTTGCC
TCGCTAACCCAAATCTCGCAACCTCTTTACCTTAAAGGAAGATCGAAATT
AGAGTTTTTCAGCGTTCCGAAAAAAACACAAAGCAAAAATTTTTCCATCT
TCACAGGATCGATTCTCAACAACAAAATACATCTTTTGGTCTTTGGATTT
GTTTCTGACGTTTTTCCTTCAAAGAATATCGATCACATTCCTTTTTCCCT
CGAGCACGCGAGAAAAAAATGATTAGCTCGCTTTCTCGCGCGGGCGAAAA
AAGATGAGGCGGCAATCTTGCACTGAGAGAGTGTTACTTAGTTTCCGCCC
TATTTTGCGCCCACAATATAATGGTCCAAATACGGGGGTATTCCAAATGA
TAAACAATGTCGTTCTGTAAGTGTTTATTTTCTAAGAGATACAGACAGTA
TATTGAATATTATTAACTTATTTATTTAAGTATCTATGAGCCCAAAAATT
TTAATATCTGGTTAAATAAAAAACAAACGATATCAGTTCTGTTTTTCCTC
AAACCCCCGGGAAAAGTTTTTTGGCCGACTTAGCTATTTTACAAATTTCG
GAAAAGAACTCCCATAGGAATTCCGATACATAACGAAAAGAAAAAAGATA
ACAGGTATAGCTTTTTCTAATCCTGGAATATCGAGGTTCCAGCTACACTG
TCCGGGAGGTCGTCAGTAATCCGACACTTTCTAGTCCGACAGTATAAATG
TCCGAAGTTTGGTTTGACGAATGCGTCAGTATTCCGACAACAATTTTGTC
CGACAACAAGTAAAAAAAAAACATATAAAAAACGTAATATGAATCGCAGA
AGAGGAGGCACATTTTTTTCTATAAATCCAAAGTTCCGATTTTGAGGTTA
CTCTCGGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAGGGGGGTTGGA
AAAAATCTCAAAATTTAATAAGCGGGGGGGTTGGAATAAAAATGTCCTGG
GTGGAAAATGTTCGAAAAGGAGGCTGATACAGCAGAATTAGGGCAAAAGA
GGGAACTTCTAAATTTTTTTTCCCAAAAATCAATAAGCGGGGGGGTTGGA
ATAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGCCCC
CCCCCGGCTATTAGGTACCCGAGAGTAGGCACCTAAACCCGACTTTTCTT
AAATTTTGGTAAGCTTGTTAGGATTAGGCTTTCAAGAGTCAAGAAATTGG
ATTTAGCTGTTTTTACGACTCTTCTTTAGTGATTTGCAACCCTGATTGTT
CCTTTATTTCTAATTATGTCAAAATTCCGCCAAAATCAACTTTTATTAAT
ATTATCTCAGTGAAAAACCCTTATTCAACATTTGACACTCAAAAATCCTT
CGTTTTCGGACAAAAGTGACGTCGGAAAAAAAGACTTCCAAATTTTAAAT
TTATTTTATAGATTCGGACTAGAAAGTGTCGGACTAGTGACATGCACCCC
ACTGTCCTATACCTTTTGTCCTTCAGAAAAGCCAAAAACATTAGCCTTAA
TCCTTTGCTTGCAGCTCTTGTGGCTTTTCAATTAGAGATACCACTTTTCT
TGCTGCCATCTTGAATTTATGTCACTTTCGCTTTCTCTAGTCCAATAAGA
CACGGCGATTTGAGTCACGTGAGTCAAATCGCGTGTCTTATTGGACTAGA
GAAAGTGAAAGTGAAATCGCACGATCTAATTGGATGAAAAAATTATTGTG
TGAACTGGGGCTGAATATAATTCTCATTTTAAATTCAAGATGGCAGCAAG
AAAAGTACGTCTTTTTGCTCACTGACCTTTATATAACCCTGGACCAAACA
ATATCTGCCATCTTTGATTGGAGTTTTTTTAGAATTGGTACCCAAGGAGA
AGCCATTGCAATGTTAAAAATTAACGTCTAACGCCGCTACATCATCAAAA
GAATTTGAGGAAAAGTAGACCTAGCGCTCTCGATGCATTTACACCGCTAT
CGAGTAGTGCCGACATTAGGGTACCAATTTTCAAAAAACTCCGATCAAAG
ATTTTGCTTGGCTGGGATTGAGAAGCTTTGTCCAGGGTATATAAAGGTCA
GTGTTTTTGCTTTGGAAAAAATGTTGTAAATTCTGGTTGATTTTAAGGTT
TTTTCCTCTCTTCTCTCATTTACTTTGATTAGTATAGGCTTCTTCAATGT
TTTGGGAAGGTAAGTTTATAAAAGTTATTTGTTTTTCGGAATGACTCTAG
CGTAGCTTTTCAAATTTCTGATAGATTTGATTTTCGCCCAACTCATGGTT
TGAAAATCCATTTTTCCGACGTTTTTTTTGCCGACCGACCGACCGACTCG
TTTTTTAGACCTAAAAACGACGCGAACACAAGTTATTTGTGATGCCCGCC
TAATTCAATTGCCTTGGAAATTCATACATTTTCTTCTTTCGCCTGGGAAA
TTTTGAATTTTGGTTAAACCTTTTGCCCCTCCGTAATCCTGTGTCTTCCG
CCCCCCCCTGTTACAGACAAATTCTGGAATGGCCCATTCCATTTTGAAGT
TCCATTTTTTGGAGTTTTTGTACAAAAGCCTCCCACCATCTTGTAACCTC
TCCATAGCACTGAAATCGAAAGTGTTTTACAAAAAAATCATTGCGGGAAG
TTTGGGACGAGTGTGTTTTTCCGTAGCGCAAGCTACAAACAGGGGTCACC
ATACCATTAACTTCCCCTTAGCACTTTCCACCCGAAGCTATTTGATTAAA
GATTTTTTCAGATTTAGAATGAAAAAACATGTATCTTGTTAAAATGTTAT
CGTTGGTTAAAAAATATTGTAGATTTTTAAAGGAAAAATTTGCATTTTTA
AGTGCATATTTTAACTTCCTGAAAAAAGTAGAACGCTCTAGTCAGCCAAC
ATGGTACGTTTCAAAAGCTAAACTGGATTAGTTTTTATGTTATTATAACT
CCTTAAATAGGTTTTGCATATTTCCCTATGAAACCTTACTACAGCAAATT
CTCTACCATTCCCGCTATTTTTCATAAAAGGCTTCTACTTCCTGCAAAAT
AAGATTTCACCAAAATTGGTCCAACTGGGCATGGGACAGAACTTGGGATT
TTGGTCCCCCAGAAAATAAAACATCTTTGTAAACAATTACGCAAGCAAAT
CAAGCAAGAAAATTTTTGGGTATTTTTTGTTATTTTGGCTAAAAATTAAA
TGCTACTTCTCAGGTGTAAAACAGCAAAGGGACACCAAAATTAGTAGTCA
AAGGCACCTTTTTGCACCCCATGTCTTTCAACTGCTTCAAAAAATCGGCA
ACAGGGGGGGGAGTTGCCACCAAGCTAATGCACTTTTCTAGCAAAAAAGG
CCAGGACTCTGGGTAGTTGAAAAATGAGCTTCAGAAAGTTAGGAAGTTTC
GTAAGTAAACACTAGATTTTCTGTACCTTTAGAAAAAAGCATTTCCAATT
TCATGCAGGTCGAATCTTGGCATTCAAAAATTTTCCAGAAATGTCAGCGG
AATCTTAGTCTAAGAAACAACAGTGTATCTGCATTTAATCAAAGATGGTG
GATGGTGGAAAGGGGAATGGTCTATAGACATTTTACTAGTTAGGATGTTG
TGTTAAATAATTTGAAAAACCCTAGCATTAAAACAATGAAACAATATTTG
CATAATTATTTCAACTGTGCATTAATTTTTTCGTATCATTATTTTGGTGC
TGGAGTTTTTAATTATTCAACATGAAATCCTTAGCTAAAGGCCTATTTGG
AAGGTTGGAAATACTGATTGAAACTTTATTTCTCTGTTTTAAGCAACCTT
CTTATAAAGAAGGTTGATAAAATAAGATAGGGTTGTTGACATTGGATCAT
CTTCAATCTTCATTACAGTAATCTGCCAAAGTCATTTGATATTTAATAGT
TTTATCATAATATTAATATTATAAGTCAATGTGTTAGAAAATCAGAACGT
TTGGAACTAAGATTTCCTTATTTCTTTTTTAGGTTTAGCTGCTTTTACAG
CAAGTCCTTATACTTATAAGCAAGCTGAGGAGATGAAGAATTGGCCATCA
GTTTACAATTACTGTAAGTTCTACTAATTTTAAATTTGCTAAGGTTCACT
GTTCTTTTTATTTTTCTACTTCAAGATGACTTGTTTTTCTTCACATTTTA
TTCTGTTCTCCATTCGTCTATAGTCTAGTTACTAGATAGAGTTTTGTCTT
GAAAGGGATGGATGCTACCTATTTGGACTTAGTCCATTAACTCAAACAGC
TAACTTCTTTAGTTCCAGGTTCTGTCTGGGAGACCTTTTCATACCCCTAT
TTATTAAAATCTAATTGGTTTAAAATACCCAAATCTTGATCCGAAACTGT
TATAGCTAGAATGAAAAGAGTTCCTTTTTACATTTTTCCAAAGTCTTCTG
AATAAAAATGTTTAGACAAAGGTTTATTTAAAGGATTGTCCTATGATATA
CGATTTTAATGTGTTTTTTTTATTCAGACAATTTACCAACTACCACTGAT
CGCTATATGGAAGATATCCCTGATGACGTCACACAACGAAAAGTATGGCG
CACAGATTACGACGATTAG Coding sequence (CDS) from alignment at sc0000018_pilon:574411..579779- >XLOC_002203 ID=XLOC_002203|Name=XLOC_002203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000018_pilon:574411..579779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTGCATTTCTTTACCCTAACGCTTGCCAGCTCTCCCCGAGAGTCTC
AAAAAGCGGTCGCGAACAAACGCCGAATCACTTTTCCATTTCCATTTCCA
AGATGGCGGCGTCCGTAGCTCGTCCGATGAGAAACCTTTTCAATTACTTG
AAGAACGCTTGGGATAGAGAGCCTATTATTGTCGTTTCGTTTGCTTTCGG
TGGCTTTGATGCGTGCATTTCTTTACCCTAACGCTTGCCAGCTCTCCCCG
AGAGTCTCAAAAAGCGGTCGCGAACAAACGCCGAATCACTTTTCCATTTC
CATTTCCAAGATGGCGGCGTCCGTAGCTCGTCCGATGAGAAACCTTTTCA
ATTACTTGAAGAACGCTTGGGATAGAGAGCCTATTATTGTCGTTTCGTTT
GCTTTCGGTGGCTTTGGTTTAGCTGCTTTTACAGCAAGTCCTTATACTTA
TAAGCAAGCTGAGGAGATGAAGAATTGGCCATCAGTTTACAATTACTGTT
TAGCTGCTTTTACAGCAAGTCCTTATACTTATAAGCAAGCTGAGGAGATG
AAGAATTGGCCATCAGTTTACAATTACTACAATTTACCAACTACCACTGA
TCGCTATATGGAAGATATCCCTGATGACGTCACACAACGAAAAGTATGGC
GCACAGATTACGACGATTAGACAATTTACCAACTACCACTGATCGCTATA
TGGAAGATATCCCTGATGACGTCACACAACGAAAAGTATGGCGCACAGAT
TACGACGATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:574411..579779 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 292-381:91 |
| Aaloc | 211-288:586 |
| Aaloc | 1-207:5370 |
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