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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:731917..735331+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002178 ID=XLOC_002178|Name=XLOC_002178|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3415bp|location=Sequence derived from alignment at sc0000018_pilon:731917..735331+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCGTTCATCGCAGGATCCACAAGCGGAGCAATCTCATGCTTTTT
GTTCCAACCTTTGGACTTGATCAAAACTAAGCTCCAAGCGCAAGTTTCAA
CTGCTACTTCACTTCAACAAGCTATTGTCGACGGTAGACTAGCTCCTAAA
CATAATTACAGGTACCTTTGCTATATTACTCTTTATAAGATTTTTAAAGG
GATCAACAGGGctcaaatgtttaaaatttatgtcatttttacCCCAAAAT
AACAGGAGGCAAAAACTCAAAGTTCACTGTTTTATCGGAAACAAACTTAC
TTGTTCCTTcagaaaatatttaatttgatCAGGAAGAATTTGCCAAACTT
TAAGTTTTTCTcttccttttcatttttactATCATTCTACTATCGATTGT
TCATTTTGATGATAGTAAGAAAAGTAGTAGCAAAAATAATACTgttaaat
tattcaaaaatttgaaattttgtctaTTCCCATTGGAAACACACGTTCTG
TAGGTAGCTTGAAATTGTAAATTTGAAGAGtggaaaatctaatttttttt
attttctttttcccttttttttagtcaaagttCTGTTGCCTCTTTGCTCA
CCCAAGTTGTTCGTGAAGACAAAGTGCTTGGACTATGGAAAGGTTTAACA
CCTGTAAGTATTGCTCCTTGTTATGATcaagtgtaagaaaatatagaaCT
GTGTTGTGGAGCAAGCATTATTCAAAAAAGGTTTTCTATACCAGCCAAGA
CAGCTCGTTTTGCCGTGAtgtttgaaatatctttagcgctattttttcac
caaatatTTTTTCCGCTAAAGCCTTTCAAAAACGTCAATTTCTCTTTATC
ATGCTCACGATGAAGTTTTTAATCTTCGAAAGGAGCTTCATTCTGATAAG
CAAGATTCTTATCAATAGTTTATTGCGAACCTCTTTCTTACTAAGTAAat
tcaattttcctagaaaccaAAAGTGATTCTTTTTCAGAACGTGACAAGAA
ATTGAAAACCCTAATAATACTGTTTTCTGTTAGCAGCAATACAAATTCCT
TAAATTACTCTCAGATATTACTGTGGGATCGAATGACTCAACGAATGACT
GGAAttctaatttttcttattttcttttttagtcgCTGTACAGAACTGTG
CCAGGCGTAGGGATGTATTTCTGTACACTACACACAATGAAAAGTGTTTT
AGAGTAAGTAATAGTAATAACTATGATCCCTTTACGTCCATTCATATTCA
TTACTGAGCTGTTAGGTTATGTAAATCACTTAAAGACGCATtttatcttt
tataagaattttgaaCCGCAGTCAAAATGTAATCTGTTGTGATCTGTTTT
TACATAATAGTGACTTTGCAAGGGAAGGACTAGCGAGCACCTctctaaaa
accgggatttttcatctcgtttcttagtgagttccactttgacgatattc
gaaaaatagaagccttttaagtgctttgacgcaaattcgattttttcgct
actgcaggagcttcgaaagttaaaagtgacgtcaaaaaatcgaatgttta
gagcccgaaaacccgggctcaaaacattcgaaaaagtcgcaaagtggaat
agacaaaaaagtcgcaaagtggaatagacgttaattgcgtaaaaaaacgc
gagtgacgtctagtataggccaGGGAAGGACTGTTTCATTCAACACGCTT
TGGTGATTTCagcttaataattttttttgaatgctTACTATAAAAATACT
TGGTTACGCATACATTGTAATTAAAGAAACCTCGTTTatagcgagaaaaa
aaaatttaaattctcatgctgaaaatgtcattaaaaattatttaaaaaag
catAACAACCCTCAGATAAGCCTCTCGCCAAACCGGTTTGACAACATTAC
AATGTCATCTTtactatttcaaaaaaaaaacgaaacgaAATTTCATAATG
ATGTTTTAATCGCCTTACTATTAAGCAACTAATTTTCTCAAGGGGTCTAT
gagtaattaactttttttgaatatctAATGGTCTGACAGCCAGCCCTTCC
GTTGCAAAGTCACCATTATGTAAAAACAAATCACAACAGATTAGATTGAA
TATTTCGAGGCCTTAGTTACCTATGAAAGGATAATACCTTTCCGTAAACA
ACCCTAGTGCAAAAGGAAATTGTAACTAAAAACTGATTAAGTTCGAAATG
TTTTGTCAAACTCTCATGCAAGTTTTTGTGACTTATAAACATTCACATTG
AAGCAAAACAAAAACTGTTAGGCTAAGAAACCTTCTCTTTCGAGTGTGTT
GTACTAAGCATTGGTCTAAGATAAATACACTTGAGAGTTTGTCTTAGCCT
AACCATGAAAGAATCTGTTTATTTAATCTCAacgtttttcttcttatttt
acAGTGAAGAACCAACCTTCTATCAGAACTTAATGCTTGGATTCACAGCT
CGCGCATGCGTAGGAACAGCTGTTTTACCTATGACCGTCGTCAAAGCACG
CTATGAggtaattattgattgattgattgattgattgattgattgattga
ttgattgattgattgattgattgattgattgattgattgattgattgatt
gattgatgacgTAGCCTAAGATTTTGTCTAGttttttttCCAAGAGATAA
TTTGAAACATGTACATTCTCATGAAGCTTACAGTGTGTTCTTACAAAGTT
TTCTCTCCTTCTTTTTCAGAGCGGAAAATACAAATACAAAACCGTATCTG
ACGGATTACGTACCATCTGGCGTGCAGAAGGACTCCGTGGTCTATTCAGC
GGATGTACAGCAACTATTTTACGGGATGCACCGTATTCCGGAATCTACCT
CATGTTTTATTCACAAGGAAAGAAAACTATGAAAGgtaaatgattatttt
ttgacATGATTGGGAGGTTGGGGAGTTTGACGTACAGTATCTTATCTTCT
GTTTAAATTCTATGCGTTAGGTGAAAGTGAAACGAGCAGCACTTATATAA
ACAATAATATCAGCTTCATAcccatttcaacaatttttgaaacGCTAGCG
GACACTATCCAAGAAaaaattgtcttcttttttgttgcttttactCATCC
TTCTTTTCTCTTTTATCCACAGATTTCGCGTCTATCGATGAAAAGGATAC
AAAAGTTCATTTCATCTGCGGTATAAACGCGGGATTGATGGCATCATTGG
TCACACATCCttttgacgtcatcaaaacacaAATGCAACTCTACCCAGAA
AAATACCGCGGTACTCAACACTGTATCAAAGTGATTTTCTCACAATATGG
ATTTGCTGGTTTTATGCGTGGACTCACGCCCCGCTGCGTGCGTAGGACAC
TGATCTCTGCTTTATCTTGGACCGTTTTTGAGGAGATTATGAAACGACTA
AAATTAAGgatctaa Coding sequence (CDS) from alignment at sc0000018_pilon:731917..735331+ >XLOC_002178 ID=XLOC_002178|Name=XLOC_002178|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000018_pilon:731917..735331+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCGTTCATCGCAGGATCCACAAGCGGAGCAATCTCATGCTTTTT
GTTCCAACCTTTGGACTTGATCAAAACTAAGCTCCAAGCGCAAGTTTCAA
CTGCTACTTCACTTCAACAAGCTATTGTCGACGGTAGACTAGCTCCTAAA
CATAATTACAGATGGAATCGTTCATCGCAGGATCCACAAGCGGAGCAATC
TCATGCTTTTTGTTCCAACCTTTGGACTTGATCAAAACTAAGCTCCAAGC
GCAAGTTTCAACTGCTACTTCACTTCAACAAGCTATTGTCGACGGTAGAC
TAGCTCCTAAACATAATTACAGtcaaagttCTGTTGCCTCTTTGCTCACC
CAAGTTGTTCGTGAAGACAAAGTGCTTGGACTATGGAAAGGTTTAACACC
TtcaaagttCTGTTGCCTCTTTGCTCACCCAAGTTGTTCGTGAAGACAAA
GTGCTTGGACTATGGAAAGGTTTAACACCTtcgCTGTACAGAACTGTGCC
AGGCGTAGGGATGTATTTCTGTACACTACACACAATGAAAAGTGTTTTAG
AtcgCTGTACAGAACTGTGCCAGGCGTAGGGATGTATTTCTGTACACTAC
ACACAATGAAAAGTGTTTTAGATGAAGAACCAACCTTCTATCAGAACTTA
ATGCTTGGATTCACAGCTCGCGCATGCGTAGGAACAGCTGTTTTACCTAT
GACCGTCGTCAAAGCACGCTATGAgTGAAGAACCAACCTTCTATCAGAAC
TTAATGCTTGGATTCACAGCTCGCGCATGCGTAGGAACAGCTGTTTTACC
TATGACCGTCGTCAAAGCACGCTATGAgAGCGGAAAATACAAATACAAAA
CCGTATCTGACGGATTACGTACCATCTGGCGTGCAGAAGGACTCCGTGGT
CTATTCAGCGGATGTACAGCAACTATTTTACGGGATGCACCGTATTCCGG
AATCTACCTCATGTTTTATTCACAAGGAAAGAAAACTATGAAAGAGCGGA
AAATACAAATACAAAACCGTATCTGACGGATTACGTACCATCTGGCGTGC
AGAAGGACTCCGTGGTCTATTCAGCGGATGTACAGCAACTATTTTACGGG
ATGCACCGTATTCCGGAATCTACCTCATGTTTTATTCACAAGGAAAGAAA
ACTATGAAAGATTTCGCGTCTATCGATGAAAAGGATACAAAAGTTCATTT
CATCTGCGGTATAAACGCGGGATTGATGGCATCATTGGTCACACATCCtt
ttgacgtcatcaaaacacaAATGCAACTCTACCCAGAAAAATACCGCGGT
ACTCAACACTGTATCAAAGTGATTTTCTCACAATATGGATTTGCTGGTTT
TATGCGTGGACTCACGCCCCGCTGCGTGCGTAGGACACTGATCTCTGCTT
TATCTTGGACCGTTTTTGAGGAGATTATGAAACGACTAAAATTAAGgatc
taaATTTCGCGTCTATCGATGAAAAGGATACAAAAGTTCATTTCATCTGC
GGTATAAACGCGGGATTGATGGCATCATTGGTCACACATCCttttgacgt
catcaaaacacaAATGCAACTCTACCCAGAAAAATACCGCGGTACTCAAC
ACTGTATCAAAGTGATTTTCTCACAATATGGATTTGCTGGTTTTATGCGT
GGACTCACGCCCCGCTGCGTGCGTAGGACACTGATCTCTGCTTTATCTTG
GACCGTTTTTGAGGAGATTATGAAACGACTAAAATTAAGgatctaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:731917..735331 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-873:3125 |
| Aaloc | 415-579:2720 |
| Aaloc | 313-414:2406 |
| Aaloc | 241-309:1133 |
| Aaloc | 163-240:576 |
| Aaloc | 1-159:1 |
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