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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:451294..453872+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002168 ID=XLOC_002168|Name=XLOC_002168|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2579bp|location=Sequence derived from alignment at sc0000018_pilon:451294..453872+ (Clytia hemisphaerica_ch_hm2_pilon)
atgggtggtaaaaagaacaaaaataaagaaaaaggtcctGGTTTAACACC
AGCGCAACGGAAAAATAATGCTCGAAAATCATTGAAAGATCAAGTCGAAa
tcaaaaaaaccttgaaaagtatCCAAGAAATTGAACGAGATGATAAATTA
TGGGACTCGGAATCTGCGAAACTGGCTGAGCTTGGTAAACAAGTTGAAGA
AGGTAAGAAAGATTATGGAAAAGTAGAAAGTGAACGTAATACGAGGTTGT
GTACTACTTTTTTCCATACACCTAACTCAAACCAAGAACGAAGAGTCGAT
TATAAAAAAGCCATGACGAACTTAGACCATGTCAACATGCTCCTGAAGGA
AGACTTGGGTAAGGAAACAAAGAAATACGCCTCATGGTATAACGCTTGTG
TTCATATGTTGGATAAAGAGAAAATAGCCAAGGAGAAATGCCAGTTATTC
CATACAAGTGATAAAGGAAAGATAGAGGATCTGGTCGAAGAAAAAAGAAA
CGCAGAATCGAAGCTGAAAGAATTGAAAGGCATTTATCAACAAATGGCGG
AGCTTGATAGGGAACGACAAATCAATAATGTCAATTTGACTTTAGAAGAA
TATATGACGCTCAAGCATAACCGTAAGTCACTGCCTCGCCGTTTCTATCT
TCGCTCGTTCGTTTGAATAATAGTTTCGCCGTTCCTATATTTGCTCGTTC
GTTCAAATAATAATATCGGAGTTCCTATAATTGCTCGTTTGTTCGAATAA
TAGTCTCGCCGTTCCTATAATTGCTTGTTCGTTCGAAAAATAGTTTCGCC
AATCATATATTTTCGCGTTCGTTCGAATAATAATCTCGCAGTTACTATAT
TTGCTCGTTCGTTCGAATAATAATATTGGCGTTCGTATATTTGCttgttc
tttcaaaaaataatatcgCCAATCATATATTTTCTCGTTCGTTCTAATAA
TAATCTCGCCGTTACTATATTTGCTCGTTCGTTCGAATGGTCATCTCGCC
GTTCCTATATTTGTTCATTCGTTCGAATAATAGTTTTGCCGTTCCTATAT
TTGCTCTTTCGTTAGAATAATAGTCTCGCCGTTCCTATATTTGCTTGTTC
GTTCGAAAAATAGTTTCGCCAATCATAGTATATTTTCTCGTTCGTTCGAA
TAGCAGTTCCGTTTCTATTGTGTATTACTTGGCCGATtccgtgtgacgtc
attttcacccacgatCAGCCCTTTTGGTAGAAAGAATATGTACAGGATGA
TTTATTAACACCTTGATAgctcaaaatctttaaatatttaCCGATTGGAC
CTACACATAGTTTCTTGTTTGATTTTGGTTCGTGGGTGAAATTTATGTCA
GTTATAAACAGGCAGCTTGCTTGAAGTTTGCTTGAGGATAGTCCCTAACT
GGATTTTGGTGAATCGGtcaatataccttatcggccctaattcaacgccg
gccccttttacgccggcctttattacgccacagccgccacagcctgattt
tgggcttacgccaattagggccgttaataacaccaaaatttgtaaaaatg
gctacttatgcttcaaattagtaaataatgacaaaaatttacattcaaat
gtcatttttcagtagtaaactgttgaaaattccatcgaaaatcactgatt
tttaaatctgagttttaaatatggagtaaaacaatggataatctTCCTCT
TCAAATCATACcgaaaatcctttaaattgagaaataatgataaaaaatta
acgccacttttaggttaaaattgcaaaTCTTGGCCTTTTTTACGCtggcc
cttttaacgccggccaTTATTACGCCacaagcccaaaaataacgccaata
agggccggtgttaaaagggccgataaggtacataAAATTCGAGAATTTTC
AATGcctttttcattcattcttttttggAAATCAGGTTCATCGAGAAGTA
TAGACGAATTACGAAAGCTCTTGAAACAGGTCAACACACAATCGCGACAG
ATACAGAAGGAGTTGGAAAACCGTCGTACAACCTGTCAAAAGATTAGTAA
CCAGattaaacaaaatgaaatcGCCTCCGTGGAGGAACACCAACGATATA
AAGACATCGTGGTGGAGAACAAAAAACTAATGGCGAAGCTGGAATATTTG
AATAAGAAACAACACTCCGTCGCAGAGGAAAAGAATCAAGCTTTGATTGA
CATGGAACGTGAAAAAGAACGAGCATATCATGAAAGTAAAGAAACGATCG
AAATCGAGGAAAGGATCAAACAATTACGACTTCAACACGACTTAGATAGA
GCCTCCGAAGCTAAATACGAAGAGATTTTACAAGCAGCCAAGGAACAGGA
CTGGGCACAAGACGTGGCTTTGAAGCATGAACGAGACAATATCACATCGT
TGACGGAGAGAATTTGTATCGAGAAAAGGCTGGTCAACACTCAACAAAAA
CAACTAGAGCAAGTAAATGGGTATAACGAGGACATGTTACGATATGTTGA
TAAAACCACATACAAAATGGTAGAGGAGTTCCACGATGACGGGAAAAGAC
ATTGGCCATGTGAAATAACACGCCATTAA Coding sequence (CDS) from alignment at sc0000018_pilon:451294..453872+ >XLOC_002168 ID=XLOC_002168|Name=XLOC_002168|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2532bp|location=Sequence derived from alignment at sc0000018_pilon:451294..453872+ (Clytia hemisphaerica_ch_hm2_pilon)
atgggtggtaaaaagaacaaaaataaagaaaaaggtcctGGTTTAACACC
AGCGCAACGGAAAAATAATGCTCGAAAATCATTGAAAGATCAAGTCGAAa
tcaaaaaaaccttgaaaagtatCCAAGAAATTGAACGAGATGATAAATTA
TGGGACTCGGAATCTGCGAAACTGGCTGAGCTTGGTAAACAAGTTGAAGA
AGGTAAGAAAGATTATGGAAAAGTAGAAAGTGAACGTAATACGAGGTTGT
GTACTACTTTTTTCCATACACCTAACTCAAACCAAGAACGAAGAGTCGAT
TATAAAAAAGCCATGACGAACTTAGACCATGTCAACATGCTCCTGAAGGA
AGACTTGGGTAAGGAAACAAAGAAATACGCCTCATGGTATAACGCTTGTG
TTCATATGTTGGATAAAGAGAAAATAGCCAAGGAGAAATGCCAGTTATTC
CATACAAGTGATAAAGGAAAGATAGAGGATCTGGTCGAAGAAAAAAGAAA
CGCAGAATCGAAGCTGAAAGAATTGAAAGGCATTTATCAACAAATGGCGG
AGCTTGATAGGGAACGACAAATCAATAATGTCAATTTGACTTTAGAAGAA
TATATGACGCTCAAGCATAACCatgggtggtaaaaagaacaaaaataaag
aaaaaggtcctGGTTTAACACCAGCGCAACGGAAAAATAATGCTCGAAAA
TCATTGAAAGATCAAGTCGAAatcaaaaaaaccttgaaaagtatCCAAGA
AATTGAACGAGATGATAAATTATGGGACTCGGAATCTGCGAAACTGGCTG
AGCTTGGTAAACAAGTTGAAGAAGGTAAGAAAGATTATGGAAAAGTAGAA
AGTGAACGTAATACGAGGTTGTGTACTACTTTTTTCCATACACCTAACTC
AAACCAAGAACGAAGAGTCGATTATAAAAAAGCCATGACGAACTTAGACC
ATGTCAACATGCTCCTGAAGGAAGACTTGGGTAAGGAAACAAAGAAATAC
GCCTCATGGTATAACGCTTGTGTTCATATGTTGGATAAAGAGAAAATAGC
CAAGGAGAAATGCCAGTTATTCCATACAAGTGATAAAGGAAAGATAGAGG
ATCTGGTCGAAGAAAAAAGAAACGCAGAATCGAAGCTGAAAGAATTGAAA
GGCATTTATCAACAAATGGCGGAGCTTGATAGGGAACGACAAATCAATAA
TGTCAATTTGACTTTAGAAGAATATATGACGCTCAAGCATAACCGTTCAT
CGAGAAGTATAGACGAATTACGAAAGCTCTTGAAACAGGTCAACACACAA
TCGCGACAGATACAGAAGGAGTTGGAAAACCGTCGTACAACCTGTCAAAA
GATTAGTAACCAGattaaacaaaatgaaatcGCCTCCGTGGAGGAACACC
AACGATATAAAGACATCGTGGTGGAGAACAAAAAACTAATGGCGAAGCTG
GAATATTTGAATAAGAAACAACACTCCGTCGCAGAGGAAAAGAATCAAGC
TTTGATTGACATGGAACGTGAAAAAGAACGAGCATATCATGAAAGTAAAG
AAACGATCGAAATCGAGGAAAGGATCAAACAATTACGACTTCAACACGAC
TTAGATAGAGCCTCCGAAGCTAAATACGAAGAGATTTTACAAGCAGCCAA
GGAACAGGACTGGGCACAAGACGTGGCTTTGAAGCATGAACGAGACAATA
TCACATCGTTGACGGAGAGAATTTGTATCGAGAAAAGGCTGGTCAACACT
CAACAAAAACAACTAGAGCAAGTAAATGGGTATAACGAGGACATGTTACG
ATATGTTGATAAAACCACATACAAAATGGTAGAGGAGTTCCACGATGACG
GGAAAAGACATTGGCCATGTGAAATAACACGCCATTAAGTTCATCGAGAA
GTATAGACGAATTACGAAAGCTCTTGAAACAGGTCAACACACAATCGCGA
CAGATACAGAAGGAGTTGGAAAACCGTCGTACAACCTGTCAAAAGATTAG
TAACCAGattaaacaaaatgaaatcGCCTCCGTGGAGGAACACCAACGAT
ATAAAGACATCGTGGTGGAGAACAAAAAACTAATGGCGAAGCTGGAATAT
TTGAATAAGAAACAACACTCCGTCGCAGAGGAAAAGAATCAAGCTTTGAT
TGACATGGAACGTGAAAAAGAACGAGCATATCATGAAAGTAAAGAAACGA
TCGAAATCGAGGAAAGGATCAAACAATTACGACTTCAACACGACTTAGAT
AGAGCCTCCGAAGCTAAATACGAAGAGATTTTACAAGCAGCCAAGGAACA
GGACTGGGCACAAGACGTGGCTTTGAAGCATGAACGAGACAATATCACAT
CGTTGACGGAGAGAATTTGTATCGAGAAAAGGCTGGTCAACACTCAACAA
AAACAACTAGAGCAAGTAAATGGGTATAACGAGGACATGTTACGATATGT
TGATAAAACCACATACAAAATGGTAGAGGAGTTCCACGATGACGGGAAAA
GACATTGGCCATGTGAAATAACACGCCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:451294..453872 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-1266:1938 |
| Aaloc | 1-621:1 |
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