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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000273_pilon:39996..44164+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002126 ID=XLOC_002126|Name=XLOC_002126|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4169bp|location=Sequence derived from alignment at sc0000273_pilon:39996..44164+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttaagaattccAAATGAGGAGAAATCCCCAAATATTCAAATCACCCC
AAGTGAAAGCATTCCAATTTCACCACAAACCAATGAGGAAAAAGTTGTTT
ATTTAGTACGACAGACAGGAATTGAAAAAGAGATTGCTCGTGAATTCCTT
GAATCTAATGGATGGAATCTACAAGAAGGTTTGTtataggtttttttttg
tacagaatctttaaaagaaaaagtagtAACCTGTTATAATTGTTCTAGTA
ATTCTAATAACTCTGTACAACCAGGTCAGGGGTGGCAGAAGcagggagac
ttcagcctccccacttttgagaaAATGAGATTTCTTTCTCACTTTCCTAG
CaaatttatctcattttgagccttcagcctccccactttatGGTTGTTCT
GCCGGGGCTGCAACTTGGTGAAGTTCATGTTCATGTTCATTATCATGTTT
GGGTTTTGGAAAGTTTGTACTTTGTATAGAATACATCTTCATGTTGTTga
gttgatttaaaattatgtcatttttttccagcaCTAATTGGTTATAAACA
ACTTGTTCAACATGAAAAACAAGCTGAGGAGGAGAAAAACGATCAAACCA
AACTCTCCACATATGATTTTGATAAACGGAAAGTCAGCCGTGGTTTTTCT
CTTTCCAACTTCAAAATCATTCAAGATGAAAGAGAAAAGCAAAAAACTCT
GGTTTGTCAAGAAAGTACAACCCAAGATTCTTTCAAAGTTCTTGGCCCAT
CATCAAGAGAATCGTTTGTTTTGCCAGACATCTCAATGCTGGACAAGGAT
GTGGCTTATATCATCAAAACAGAACTCATTAGTAAAAGTGCTCTCCATAA
GCTTACTAATGTGGGTAAGTAagaaatttgagttttttttaccTATGTCT
agagattttttaaattacgtaggcttttttcagaaatttcccTGATTTTC
TTGCCCAAAGATAcataaaatatcattaacccTCATAACATCGTTGTCAA
AGAAGAAGGACCAATCTCAAGATGAGTCTCTTAGCATATTGAGAATCTTT
CTATATAAGATAAGCCTTTGATAATGAAATTGGACCTCTAATCTTACAGA
GGAGAGATGCATCCAAAGgtttatcttataaaaaaattctcaccTTCCTA
AGATACTAATTTTGAGGTTTGCCCTTTTGCCTTGACAACGACGATATGCA
GAATAATTATATTGTTAGGGGTTTATAGAGTCAGAGATTTAATATTCTAG
TCAAAatgcctttttcaaattttaggacGTTTAAATTGGTGGACTGAAAT
GGGTACATGTCGCAAATTATTTCCACTCTTGACAGTAGGAGATGGGAATT
GTTTATTGCATGCAGCTTCACTTGGAATGTGGGGCTTCCACGACCGGATG
TTGATCCTGCGTAAAGCACTTTATCAAATGTTTCTAAATCCAATTGCAAT
TAAAGCATTGAAAAGACGTTGGAAGTATAACATGTGGGTTGATAATATGA
AGTGTGGTAGGTGAAGGGGGTATTCAAAATATGTCTGCTCAAAATATCAA
ATAGCTTCCTACTCTTTTCCACACTTCTACATTGCTGTTAgacattgtta
accggttactttttcgaaatgggctacatggctttttgcgcaatgcaatt
ggttcttttcgcatgacgacaggcctacattgtccagagttgcccgtcgt
taggaaaattcattgtgttgtgacgtcactttttcaaaggaaaatgaata
atgcgttgacatcatttctctcattttttatttctgacgtcagaaattat
agcaatttttgatctcttttcgcttgttttttctgctttatttcgctatt
tttcctggaaaatgcgctaaaaatcaatcaaagttgaaggaaacggttaa
caaatacaataatgaccggttttttcgggctatactgtgaaatattgccc
gaggtcaacaCAACAACCttgcaagctcggtcgttacttgacctcaggca
atatttctcagtacaaccctcactaaccggtcattattgtattaatagaA
TACAACATAATAAAAAGCTTTATTCCCTCCAATTGTGCAAATATTATTCA
AGCTATTTGAAGCCTCTGAATCACAGCTGTCCAATCTTGCAGATTACCAA
AATTCGAAGGGTATTAGATTAGTAAACCCACTATTACAGACTGCTACAGA
TTCCCAATAAAACATATAATAAAACTTGAGTGAACCtgcatatatttttt
ttaatttcgaggCCCTTCAAACCATgaaaataatttgcgcttttTATACT
GATCCCTACACCATCTTGAATCATGTCATAATACATGTATTTTGAAACAG
TGTAATGTCATTATTAGATCTACTGacaaaatattcatgatatgcaccaa
tgcaaatgaattcaaaaaatcatGTAGCTATTCTGTTTTCTTGCACCTAA
TAtatcacttgcaaccaatcagaatcATCTGTCTTTAAAAAGTGACACAG
TTTCAGAAGCCAGGGGTGCATGTCCTGAATGTGGGCTTAAATATACAAGA
GTCATATAAAATTGTACTAATGTgttattttcaatactttttcttttgtt
taaccAACAGGTGGTTTGACTTTTACTCGCCAAGAATGGGACACAGAGTG
GAACACAGTTGTCGGGTTAACCAGTAATGTCTCACACAAGCTAGAATCAG
ACTCTTCACAGAACTGCAAAAGAATAACGCGACAAATTTCATTATCAAGC
TCTAATTCTGAACTAGAAGAAGGAGAGAGCTTAGATAGTCTTGAGCCAAT
TCATGTGTACGCACTTTCAAATTTATTGTGTCGACCCATTATTGTTCTGT
CAGAAGACATGTTAAAGGATGCAGAGGGTCGTCCTATCGCCCCAATCCCT
TTTGGTGGGATATATTTACCGTTAGAGCAAGATGTCAGTAAATGTTATAA
ATATCCTCTCATTTTGGCTTTCGAGTCATCacatttttcagctttggtAC
CTGCTGATGGTGACAATTTACATAATGGCGAGAAGTTGTCATCAAGTGTG
CCATTACAAAACAAAGATCTTGCATTTTTGGATCTCAAATTTGCAATGGA
TCCTGGATCAACTTGGGATATGGTTCAGGATGATAGTGTAAAGGAGGAAC
GTATGGAATTAACATTACaagagaaaattattttattgcGGAAATATATG
GATGTTGTTAAAGTCCCATCCAAAAAGGCAAAGCCAGCACCTCCACCAGT
TAATGATTTAAGGGTTGGTTCTGTTATTGATCATGTACATAATGTCTTAG
TTGGGCGACCAGAAAATTTACAACCACCAGCCCCTGAACCAGATATAATG
CTTGTTTGCGCTAAAATTAGCATGAAGAATCGTCCAAAACATTACAAGGA
AATGATTCAAAACTTTATTGACACCAAAATGGTTGAAGCTAAAGAATTAC
GAGATTTACAAAATCGATGTCCAAATTGTGGTGCTGAAGGTTTCCCACAT
TTGAAAGGTTATTGTGAGTGGTGTTTTGAGCGCGCCAAGATGGTTGGAGG
GAAATCACCAAGTCCAAAACAGAAATCGCCCATCAGTACGCTTGTGAGGA
GAACAAACAAATTGCTGATAGGGGAACCTGACAATaacaaaaatcagaaa
caaaATTTCTTGTGTTCTCCACCCTCACCAAGAACTTCCTCTAAGACGTT
ACCAATGCCtgctaaaaagaaagaaaacaacagCATACCATCAACACAAA
ATGTGACCCAAGAGGAACCTTTGCCCATGAAATCACGATCAGCTGATAAT
ATTCACTATCCGCCATCAATGCGAGGTCAGCAAACAAGAGAACAGATTAT
TAGCCAAGAAGAAGCTGGTTTTTATCGCAGTCAATCACTTTCAAACAGGC
CTGAAGTCGCCCCTTTGAACCCTTCACTATCTCGACCACAAACTTCAGAG
CCCTCATCTCGACCCCACATATCAAGGCCATTATCTGATCCGCAAAATAC
CAATGAATCACAACCATCAAGACCTCAGACGTCACCAAGTGCTCCATCAT
CAACTTCACCAGGAGAATTTGTTCCTGGTAAACCATGCAAAGTGTCTGGC
TGTAATTTTTATGGCAGTAATCAAACTTTAGGGTTTTGTTCTGGCTGTTA
CAGACAATATAatcattga Coding sequence (CDS) from alignment at sc0000273_pilon:39996..44164+ >XLOC_002126 ID=XLOC_002126|Name=XLOC_002126|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4602bp|location=Sequence derived from alignment at sc0000273_pilon:39996..44164+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttaagaattccAAATGAGGAGAAATCCCCAAATATTCAAATCACCCC
AAGTGAAAGCATTCCAATTTCACCACAAACCAATGAGGAAAAAGTTGTTT
ATTTAGTACGACAGACAGGAATTGAAAAAGAGATTGCTCGTGAATTCCTT
GAATCTAATGGATGGAATCTACAAGAAGatgttaagaattccAAATGAGG
AGAAATCCCCAAATATTCAAATCACCCCAAGTGAAAGCATTCCAATTTCA
CCACAAACCAATGAGGAAAAAGTTGTTTATTTAGTACGACAGACAGGAAT
TGAAAAAGAGATTGCTCGTGAATTCCTTGAATCTAATGGATGGAATCTAC
AAGAAGcaCTAATTGGTTATAAACAACTTGTTCAACATGAAAAACAAGCT
GAGGAGGAGAAAAACGATCAAACCAAACTCTCCACATATGATTTTGATAA
ACGGAAAGTCAGCCGTGGTTTTTCTCTTTCCAACTTCAAAATCATTCAAG
ATGAAAGAGAAAAGCAAAAAACTCTGGTTTGTCAAGAAAGTACAACCCAA
GATTCTTTCAAAGTTCTTGGCCCATCATCAAGAGAATCGTTTGTTTTGCC
AGACATCTCAATGCTGGACAAGGATGTGGCTTATATCATCAAAACAGAAC
TCATTAGTAAAAGTGCTCTCCATAAGCTTACTAATGTGGcaCTAATTGGT
TATAAACAACTTGTTCAACATGAAAAACAAGCTGAGGAGGAGAAAAACGA
TCAAACCAAACTCTCCACATATGATTTTGATAAACGGAAAGTCAGCCGTG
GTTTTTCTCTTTCCAACTTCAAAATCATTCAAGATGAAAGAGAAAAGCAA
AAAACTCTGGTTTGTCAAGAAAGTACAACCCAAGATTCTTTCAAAGTTCT
TGGCCCATCATCAAGAGAATCGTTTGTTTTGCCAGACATCTCAATGCTGG
ACAAGGATGTGGCTTATATCATCAAAACAGAACTCATTAGTAAAAGTGCT
CTCCATAAGCTTACTAATGTGGgacGTTTAAATTGGTGGACTGAAATGGG
TACATGTCGCAAATTATTTCCACTCTTGACAGTAGGAGATGGGAATTGTT
TATTGCATGCAGCTTCACTTGGAATGTGGGGCTTCCACGACCGGATGTTG
ATCCTGCGTAAAGCACTTTATCAAATGTTTCTAAATCCAATTGCAATTAA
AGCATTGAAAAGACGTTGGAAGTATAACATGTGGGTTGATAATATGAAGT
GTGgacGTTTAAATTGGTGGACTGAAATGGGTACATGTCGCAAATTATTT
CCACTCTTGACAGTAGGAGATGGGAATTGTTTATTGCATGCAGCTTCACT
TGGAATGTGGGGCTTCCACGACCGGATGTTGATCCTGCGTAAAGCACTTT
ATCAAATGTTTCTAAATCCAATTGCAATTAAAGCATTGAAAAGACGTTGG
AAGTATAACATGTGGGTTGATAATATGAAGTGTGGTGGTTTGACTTTTAC
TCGCCAAGAATGGGACACAGAGTGGAACACAGTTGTCGGGTTAACCAGTA
ATGTCTCACACAAGCTAGAATCAGACTCTTCACAGAACTGCAAAAGAATA
ACGCGACAAATTTCATTATCAAGCTCTAATTCTGAACTAGAAGAAGGAGA
GAGCTTAGATAGTCTTGAGCCAATTCATGTGTACGCACTTTCAAATTTAT
TGTGTCGACCCATTATTGTTCTGTCAGAAGACATGTTAAAGGATGCAGAG
GGTCGTCCTATCGCCCCAATCCCTTTTGGTGGGATATATTTACCGTTAGA
GCAAGATGTCAGTAAATGTTATAAATATCCTCTCATTTTGGCTTTCGAGT
CATCacatttttcagctttggtACCTGCTGATGGTGACAATTTACATAAT
GGCGAGAAGTTGTCATCAAGTGTGCCATTACAAAACAAAGATCTTGCATT
TTTGGATCTCAAATTTGCAATGGATCCTGGATCAACTTGGGATATGGTTC
AGGATGATAGTGTAAAGGAGGAACGTATGGAATTAACATTACaagagaaa
attattttattgcGGAAATATATGGATGTTGTTAAAGTCCCATCCAAAAA
GGCAAAGCCAGCACCTCCACCAGTTAATGATTTAAGGGTTGGTTCTGTTA
TTGATCATGTACATAATGTCTTAGTTGGGCGACCAGAAAATTTACAACCA
CCAGCCCCTGAACCAGATATAATGCTTGTTTGCGCTAAAATTAGCATGAA
GAATCGTCCAAAACATTACAAGGAAATGATTCAAAACTTTATTGACACCA
AAATGGTTGAAGCTAAAGAATTACGAGATTTACAAAATCGATGTCCAAAT
TGTGGTGCTGAAGGTTTCCCACATTTGAAAGGTTATTGTGAGTGGTGTTT
TGAGCGCGCCAAGATGGTTGGAGGGAAATCACCAAGTCCAAAACAGAAAT
CGCCCATCAGTACGCTTGTGAGGAGAACAAACAAATTGCTGATAGGGGAA
CCTGACAATaacaaaaatcagaaacaaaATTTCTTGTGTTCTCCACCCTC
ACCAAGAACTTCCTCTAAGACGTTACCAATGCCtgctaaaaagaaagaaa
acaacagCATACCATCAACACAAAATGTGACCCAAGAGGAACCTTTGCCC
ATGAAATCACGATCAGCTGATAATATTCACTATCCGCCATCAATGCGAGG
TCAGCAAACAAGAGAACAGATTATTAGCCAAGAAGAAGCTGGTTTTTATC
GCAGTCAATCACTTTCAAACAGGCCTGAAGTCGCCCCTTTGAACCCTTCA
CTATCTCGACCACAAACTTCAGAGCCCTCATCTCGACCCCACATATCAAG
GCCATTATCTGATCCGCAAAATACCAATGAATCACAACCATCAAGACCTC
AGACGTCACCAAGTGCTCCATCATCAACTTCACCAGGAGAATTTGTTCCT
GGTAAACCATGCAAAGTGTCTGGCTGTAATTTTTATGGCAGTAATCAAAC
TTTAGGGTTTTGTTCTGGCTGTTACAGACAATATAatcattgaGTGGTTT
GACTTTTACTCGCCAAGAATGGGACACAGAGTGGAACACAGTTGTCGGGT
TAACCAGTAATGTCTCACACAAGCTAGAATCAGACTCTTCACAGAACTGC
AAAAGAATAACGCGACAAATTTCATTATCAAGCTCTAATTCTGAACTAGA
AGAAGGAGAGAGCTTAGATAGTCTTGAGCCAATTCATGTGTACGCACTTT
CAAATTTATTGTGTCGACCCATTATTGTTCTGTCAGAAGACATGTTAAAG
GATGCAGAGGGTCGTCCTATCGCCCCAATCCCTTTTGGTGGGATATATTT
ACCGTTAGAGCAAGATGTCAGTAAATGTTATAAATATCCTCTCATTTTGG
CTTTCGAGTCATCacatttttcagctttggtACCTGCTGATGGTGACAAT
TTACATAATGGCGAGAAGTTGTCATCAAGTGTGCCATTACAAAACAAAGA
TCTTGCATTTTTGGATCTCAAATTTGCAATGGATCCTGGATCAACTTGGG
ATATGGTTCAGGATGATAGTGTAAAGGAGGAACGTATGGAATTAACATTA
CaagagaaaattattttattgcGGAAATATATGGATGTTGTTAAAGTCCC
ATCCAAAAAGGCAAAGCCAGCACCTCCACCAGTTAATGATTTAAGGGTTG
GTTCTGTTATTGATCATGTACATAATGTCTTAGTTGGGCGACCAGAAAAT
TTACAACCACCAGCCCCTGAACCAGATATAATGCTTGTTTGCGCTAAAAT
TAGCATGAAGAATCGTCCAAAACATTACAAGGAAATGATTCAAAACTTTA
TTGACACCAAAATGGTTGAAGCTAAAGAATTACGAGATTTACAAAATCGA
TGTCCAAATTGTGGTGCTGAAGGTTTCCCACATTTGAAAGGTTATTGTGA
GTGGTGTTTTGAGCGCGCCAAGATGGTTGGAGGGAAATCACCAAGTCCAA
AACAGAAATCGCCCATCAGTACGCTTGTGAGGAGAACAAACAAATTGCTG
ATAGGGGAACCTGACAATaacaaaaatcagaaacaaaATTTCTTGTGTTC
TCCACCCTCACCAAGAACTTCCTCTAAGACGTTACCAATGCCtgctaaaa
agaaagaaaacaacagCATACCATCAACACAAAATGTGACCCAAGAGGAA
CCTTTGCCCATGAAATCACGATCAGCTGATAATATTCACTATCCGCCATC
AATGCGAGGTCAGCAAACAAGAGAACAGATTATTAGCCAAGAAGAAGCTG
GTTTTTATCGCAGTCAATCACTTTCAAACAGGCCTGAAGTCGCCCCTTTG
AACCCTTCACTATCTCGACCACAAACTTCAGAGCCCTCATCTCGACCCCA
CATATCAAGGCCATTATCTGATCCGCAAAATACCAATGAATCACAACCAT
CAAGACCTCAGACGTCACCAAGTGCTCCATCATCAACTTCACCAGGAGAA
TTTGTTCCTGGTAAACCATGCAAAGTGTCTGGCTGTAATTTTTATGGCAG
TAATCAAACTTTAGGGTTTTGTTCTGGCTGTTACAGACAATATAatcatt
ga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000273_pilon | genome | sc0000273_pilon:39996..44164 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 745-2301:2613 |
| Aaloc | 514-741:1278 |
| Aaloc | 181-510:534 |
| Aaloc | 1-177:1 |
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