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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000273_pilon:73206..78232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002122 ID=XLOC_002122|Name=XLOC_002122|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5027bp|location=Sequence derived from alignment at sc0000273_pilon:73206..78232+ (Clytia hemisphaerica_ch_hm2_pilon)
AATATGGGAAGACAGTCGAAAACAGAAATCAATTTACAACGTTTATTGAG
ACATTGTGAAACCATGGCAACTGAGTCTCAACACAAAGAAACTAAAGTCA
ATTGGAGGCTGGCAAAGGTATGTAATGAAGTCTTTTTTAAATCCATCTTT
TCAATACTTCGtttttttaggctcagcattgttcgttctagttttaattg
ttctcgtttttttaagatttcaagGTCTTACTAATTATTCTTTTACAATT
CTGGTTCTTCTTAGTTCCAAAAATGCTCGATGATATCTCAGAGAGCTGTT
TAAGTTATTGAGAATAAGACTTGTCCATACGGACGGCATGTGAAATTATA
GAATTATAGAGTTCATTTTCTCATCCTCTTTTTCAGTATCTGGAGACGGC
TGATGACCAAATATGCAAAATGGAAACTGATAAAAATGTGTAAACTTTTA
ATATCTCTTTTATTAATCTCATATACCGTCTTCATTTTATGTTAAAAACC
TTCTTCCTGTTTTAAGTTCTTGATTTCGGCCAAACACCTGAGATTAAACG
GCTGTATCCAACATCTAATTGGTTTCGAAACCAATGAAAAGTGTAATTCT
TCTGGAACCTTGCTGATGTCCAGTCTGCTCCTAGGCTAGAAAAACTTTGG
CGAACTGCCTTAGAAATgttttcgccaaaataaatcGCCGAAATAAAATC
CGCCAAATTGCACAAGGGTcccattcaccaaaatttcccATCTGagttaa
taattattaaaaaattcatATTTCGATTGCTGTAGGAAGGTTCCAGAAGA
AGTGATAACAGAATACAAGCGAAAAGTGACTTTCCTCAAAGATGTTGTAC
AAGCTGAAAAAACGGTATTATATGAATatacctttatatatccctgggtC
AAGCTatgtccgccatctttgatcgaagtttttttgaaagttggtacccg
caaagaagccattgtagtgtttgaaactttgcctaaacGACAAACGgctc
tctccgcgggtaccaatttcaaaaaaactccgatcataatattttgcttg
gctggcATTGAGGAACTTGGAACACAGGgatatacaatgtatagcaatgt
gccctcccggttattaccataatggctttatggtaactcctgaacttggg
cacaggatgtacggctACACAGGGATATATAAAAGTCAGTGCAAGTATTT
TCGCAGTACCATAGAATGGGTGAACTTTTTCATACCCGGGGAAACACTCA
ACAAGGGGAAAAGATTAACAAAAATCCCAAAATGACGTAATTAATTGCCT
TCTTTGCAAGGATACTCCGCATAAAAAACTGTagatggctaaaatgttaa
gagcaagctaagaatattttaaggctttgtgaactcaaaaacacacaatt
tttttaagaaatagcACAAAAGTAGTCCCAGAAAATGGGACTTTTaaaaa
ttgtggatgttcttattaaaaaacacaGTAAAAAGTTAAAGGAGAATCAA
AAGGCTTTTTCCTCCAGGTTTTTTAAccaataaataatttttatgtttta
cagCAAGATCCTTTGGAGAGGATCTTGATTTGCCAACATCTACTTCCAAC
ATCAGTTATTTCATCCACTTCATCAATAAACCTGGACGAAGAACAACAGA
GAAATACCAACAATAAAACCAAAGAACTCCATCTCCAAATCAAAGGAAAA
CATCAAAACGATTTAAGACGTCAATTATTAGGTATTCaccatggacccaa
cagctgattggttgtaagtgacgtaaaatcagtcaatatgtcactttcaa
ccagtgagctattgggtccgttaaagatattgcaatggtgcatattatga
atacatgctcttttatttataagaataattttttacgAACACCAGCCTCA
GAATTTAGGCCCTCAGAACAAAAGCTCCATTGTTTGGAACAATCGAAATT
TAAGAGCAATCTCAGactcagccaaaatttactggttcttattaaaaaca
agAGTGTGTAATTTGGAGCTTACTTCTATATATGTTTTCTACAGCCAACT
CTTtctaatttgatcttcaagGTACCAATATTCTTGTTCGAATTATAGTA
AGATTTGCATAGTAgatgttcgaattagagagagttgacttaGTTTTCAC
TCcaaattttcaattaaataaAGTATACAAGTCGTTTGGATTTGAGGGGt
ctaagaaaaaaaagatttttgaaattgagaATCACAGATTATGACGGAAC
TCTACTTCTCAAGccattcattttcattttgtttttgttcaggTGAAAAA
GGTTCACATCCACACAGTTTAAGTAAAaggtaaaaatatatattcgctga
tcaaaatttattaaacAATTGCTAAAGGTTTCAACTTGTTTTGTAGTAGT
TCTTATGTATTGTTTTTGTATGAGCTATATATATCTCCATTCTTTAAGTT
GGCAAGAAATCTGCATCTAATACTACTAGTTCATATTAATTCAACTATGT
ATTTTGCTAATGTTATCGTGTCAATATGGAAGCGTGTCGAGTTTTAGACC
TGAttagtctgccattttgttttcaattctggtcgtcaacagcgcgattc
gaatgttttgaaactgGAACGTTCGAAAACtcataaaaatagaaaacaac
atggcggacTAGCCGACTTCAAAATTGATCAGTATATCTAGTgtgtaccg
taacttggtctaatgtcgacattccTCTTCTAATCTTTAGAGATAAGAAT
AGTAGAaaggtcagaatcgctgatggagactatatttctttgcttagcga
ccaaagaggaaaaaatcttttttctatcagtgattctgaccttaccaggg
gggggtccatgtacaaaacagcggcatgtatcagtactttgtagcaaatt
tcgattttaaacacccacccacccctatagtacaaaatgtacaaaatact
atccagcaaactcccaaaaacaccccaacaccccctatattttacaatat
actatccagtactatccagcaaactcccaaatacaccctgacaccccctg
tataatacaatatactatcaAGCAAACTGCCAAATATACCCCAAATATAC
CCCAACACCCCCCTTACATAGTACAATATACTAACCAGAAAACTACCAAA
TATACCCCTACACCCcttcataaaatgaaaattttaagccaaaaaaatat
tcttcccataaaaaaaatttttgaaaaattttgtcgaaaattgacaaaaa
caattgaaaattaaaaaaaattttcgacaaaaatctaaaataaatcacaa
tttgatttgattttggctttttagtacacGTATACTAAAAAGCAAAtcag
aaatttgaccctgacacccccatGTATTGTACACAAGTACtaaacagcaa
aatttttttgaaaacacccacccaccccatgatacatgccgcttttttgt
acatggacccccccctGACCTTACTATTATTTctatctctaaaactgggt
gtcagaattagaagaggaatgtcgacattagaccaatttaCGGTAAAGAA
TATGATATGTGTGATCATTTCAGAGAAACAGAAAACAACACGGAGAATAA
CATTGATGAGATCATCAAACAACATCATGACATCCAAGAAAAAGTCGCCG
AAGAAATGATCCTGATGACGCAACATATGAAACAAACCACGCTTCGATCA
CGTGATATTATCAATAAGGATAAACAGGTTTGCTTTTGACGGGGGTCTTA
TTTAGGCCACACGAACGGCGAATTTCGCCGGTCCAAGAcacgaaaaaaat
tacaatttgcCGGGTTAAAATTCGGTTCGCCGCCTTAAGTACATATTCAG
GTTAATCAATACTtgcttgctaagaattcgccggAGTGAATTTTTCTTCG
CCagcctatcaaaaacaaagcagACCTATGCTTTAACGGAGAAATAACGG
AGACGGGACTAGGAAGGCGCCATTGGATGACTTATCCATCCAGTTTTAGT
TTCTGGAGTCAGAACTCACTCATGGCCGCTTGACAGAATAATGGTCTAAT
GATGTGACAATTCCCACCCGATGATATTGTTTTAAGATATAAACTCGCTT
AAGAGAACTAATTCTGCTACTTAAAGTAACAGGTATTTTATTCTAACAAA
TTGATTTAGCTTATTGGTAAAGAATTTGTAGGCAAAATACAATTGGCAGG
TTTACCGCCGAATTCGTCAAAATTGTCTAATCCTCGCTCTAATTGAAAAA
TTGTGTCACTCGTATACGACTCTTGTCCCTACGTCAAATTTACGCCCATT
AAGGTGTTGCCCCATAATTCTCTTAATGTTATAATTATAATTCGAGATCT
TTATCGGATAAAGTGTACGATATGTTTTTAAGATGGCTACATTTGCTCAG
ATCAAGTAGTTCGACTGGAGTTgtctggagtcgtttataatctaTGTAAT
ACAATAGTATAGGTTTTATATGAGTTTGCATAAACTATAATAATGTCTTT
TAGTTTTCGTTAGTACTATATACTCTAATCTCTTTGAAATCTAGTCGCAA
GACGTACTACAAACCTTTTTATTAGAACCAAAtccaaaaaataagcacat
ccagacGTTCTAATAAAGAAAGTGTTTGTacaattcttgatatgcataag
tcaagatgacgtcatatttttcaacggaagcacccaaaaaagccggtttt
tgacctctgtgtttctatttttagtaacagagagaggtcaaatcccggct
ttttcagggtgtttccgttagaaaaataacttacgcatatcaagaataaa
aaGTATTCATCGTCATATTAACTTTGTATTGATTTCAGGAGCTAGAACGT
TCAAACAAAGTGGTTGATCATAATATCCAGAAATTGAAAGTGGAATCCGA
TCGATTGGAGGAAATGAACAAACGAAGATGTTCTTGTTCCATTTGGGTCA
TGCTTGGTGTCGTTTGTATTGTTTTCGTTAATATGATCATCTTCATCAAG
TTCTTCCCTAAAAAGAGAGGTTATTAA Coding sequence (CDS) from alignment at sc0000273_pilon:73206..78232+ >XLOC_002122 ID=XLOC_002122|Name=XLOC_002122|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000273_pilon:73206..78232+ (Clytia hemisphaerica_ch_hm2_pilon)
AATATGGGAAGACAGTCGAAAACAGAAATCAATTTACAACGTTTATTGAG
ACATTGTGAAACCATGGCAACTGAGTCTCAACACAAAGAAACTAAAGTCA
ATTGGAGGCTGGCAAAGAATATGGGAAGACAGTCGAAAACAGAAATCAAT
TTACAACGTTTATTGAGACATTGTGAAACCATGGCAACTGAGTCTCAACA
CAAAGAAACTAAAGTCAATTGGAGGCTGGCAAAGTATCTGGAGACGGCTG
ATGACCAAATATGCAAAATGGAAACTGATAAAAATGTTATCTGGAGACGG
CTGATGACCAAATATGCAAAATGGAAACTGATAAAAATGTGAAGGTTCCA
GAAGAAGTGATAACAGAATACAAGCGAAAAGTGACTTTCCTCAAAGATGT
TGTACAAGCTGAAAAAACGGAAGGTTCCAGAAGAAGTGATAACAGAATAC
AAGCGAAAAGTGACTTTCCTCAAAGATGTTGTACAAGCTGAAAAAACGCA
AGATCCTTTGGAGAGGATCTTGATTTGCCAACATCTACTTCCAACATCAG
TTATTTCATCCACTTCATCAATAAACCTGGACGAAGAACAACAGAGAAAT
ACCAACAATAAAACCAAAGAACTCCATCTCCAAATCAAAGGAAAACATCA
AAACGATTTAAGACGTCAATTATTAGCAAGATCCTTTGGAGAGGATCTTG
ATTTGCCAACATCTACTTCCAACATCAGTTATTTCATCCACTTCATCAAT
AAACCTGGACGAAGAACAACAGAGAAATACCAACAATAAAACCAAAGAAC
TCCATCTCCAAATCAAAGGAAAACATCAAAACGATTTAAGACGTCAATTA
TTAGgTGAAAAAGGTTCACATCCACACAGTTTAAGTAAAaggTGAAAAAG
GTTCACATCCACACAGTTTAAGTAAAagAGAAACAGAAAACAACACGGAG
AATAACATTGATGAGATCATCAAACAACATCATGACATCCAAGAAAAAGT
CGCCGAAGAAATGATCCTGATGACGCAACATATGAAACAAACCACGCTTC
GATCACGTGATATTATCAATAAGGATAAACAGAGAAACAGAAAACAACAC
GGAGAATAACATTGATGAGATCATCAAACAACATCATGACATCCAAGAAA
AAGTCGCCGAAGAAATGATCCTGATGACGCAACATATGAAACAAACCACG
CTTCGATCACGTGATATTATCAATAAGGATAAACAGGAGCTAGAACGTTC
AAACAAAGTGGTTGATCATAATATCCAGAAATTGAAAGTGGAATCCGATC
GATTGGAGGAAATGAACAAACGAAGATGTTCTTGTTCCATTTGGGTCATG
CTTGGTGTCGTTTGTATTGTTTTCGTTAATATGATCATCTTCATCAAGTT
CTTCCCTAAAAAGAGAGGTTATTAAGAGCTAGAACGTTCAAACAAAGTGG
TTGATCATAATATCCAGAAATTGAAAGTGGAATCCGATCGATTGGAGGAA
ATGAACAAACGAAGATGTTCTTGTTCCATTTGGGTCATGCTTGGTGTCGT
TTGTATTGTTTTCGTTAATATGATCATCTTCATCAAGTTCTTCCCTAAAA
AGAGAGGTTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000273_pilon | genome | sc0000273_pilon:73206..78232 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-810:4839 |
| Aaloc | 469-621:3575 |
| Aaloc | 433-465:2295 |
| Aaloc | 253-429:1554 |
| Aaloc | 175-252:787 |
| Aaloc | 121-171:387 |
| Aaloc | 4-120:1 |
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