XLOC_002121 (mRNA) -

Overview
NameXLOC_002121
Unique NameXLOC_002121
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000273_pilon:79487..80335+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002121 ID=XLOC_002121|Name=XLOC_002121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=849bp|location=Sequence derived from alignment at sc0000273_pilon:79487..80335+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagtaACTTGAATAATAAACCTGCTGCTTTTGCGTTTGTTCCAAGAAG TTTGGTTGCCAAGCAACACACACCAAGTAAGTGTGGTTACACTGTGTTTG ATGAGATTTCCCATAATCCAATTTCACTATTCATAGATTTGAAATAAAGA GCTAGCCAGGCCCGGCGGAGCAACCGTAAAGGTAGGGAGGCTGAAGattc aaaatgagataaaattcgctaggaatttgcttccgccgggcctgaatGGG GTTTtaattaacacgaaatttcttAATTCGTGTTAATTACATCTCTACTt attttcatgtaataaggtattatCCAGCCCCTCCACTTGGCTTTTCCGCC GGGGCTGcctttaattaaaaccagccgtggtgtccttgaaaaagaaaatg aaattcgtGTTATTTTTCTGCGTGCTAATTTCAAGGCCATTAATTATGTG TCTACTTATTTTCGTGTATTAAGGTAATTACAAGTTCTGAAAAGAAAACC TTACAGAAGTCATCTGATCCTTTATAAAAGTACAATctattcaattttct ttgttatcTTATTCATCTCAGAGGCGCAGCAAGCAAGGAGTTCAAACTTA TCATCGATCAAACCACCACATCTCCATGACAACAATGATGATGATGTCGT CAAGGCAACCAGTGCACAACAAAGATGGCCGAACGCTGACGAACCAGTTT GCGTAATGTGTGGAAAATACGGCGAATATATATGTGATGAAACGGACGAA GATGTCTGCTCTTTAGCCTGTAAAGCTACACATTTGAAACAAGTTGGATT ACAGGCTAAACCACAATTTGATGAGACTATTGAGAAACAAATCACAGAG

Coding sequence (CDS) from alignment at sc0000273_pilon:79487..80335+

>XLOC_002121 ID=XLOC_002121|Name=XLOC_002121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=708bp|location=Sequence derived from alignment at sc0000273_pilon:79487..80335+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagtaACTTGAATAATAAACCTGCTGCTTTTGCGTTTGTTCCAAGAAG
TTTGGTTGCCAAGCAACACACACCAAatgagtaACTTGAATAATAAACCT
GCTGCTTTTGCGTTTGTTCCAAGAAGTTTGGTTGCCAAGCAACACACACC
AAAGGCGCAGCAAGCAAGGAGTTCAAACTTATCATCGATCAAACCACCAC
ATCTCCATGACAACAATGATGATGATGTCGTCAAGGCAACCAGTGCACAA
CAAAGATGGCCGAACGCTGACGAACCAGTTTGCGTAATGTGTGGAAAATA
CGGCGAATATATATGTGATGAAACGGACGAAGATGTCTGCTCTTTAGCCT
GTAAAGCTACACATTTGAAACAAGTTGGATTACAGGCTAAACCACAATTT
GATGAGACTATTGAGAAACAAATCACAGAGAGGCGCAGCAAGCAAGGAGT
TCAAACTTATCATCGATCAAACCACCACATCTCCATGACAACAATGATGA
TGATGTCGTCAAGGCAACCAGTGCACAACAAAGATGGCCGAACGCTGACG
AACCAGTTTGCGTAATGTGTGGAAAATACGGCGAATATATATGTGATGAA
ACGGACGAAGATGTCTGCTCTTTAGCCTGTAAAGCTACACATTTGAAACA
AGTTGGATTACAGGCTAAACCACAATTTGATGAGACTATTGAGAAACAAA
TCACAGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_002121XLOC_002121-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273_pilongenomesc0000273_pilon:79487..80335 +
Properties
Property NameValue
Aaloc145-357:637
Aaloc79-141:574
Aaloc1-75:1