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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000408_pilon:3226..6686- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002101 ID=XLOC_002101|Name=XLOC_002101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3461bp|location=Sequence derived from alignment at sc0000408_pilon:3226..6686- (Clytia hemisphaerica_ch_hm2_pilon)
CCAGCTAAGGTTGAAAAGCGGATCAGTTTGTTCTATTTGGCAAATGACGT
TATTCAAAATGGACGCAAGAAAGCAAAAGATTTGGTCACTGCATTTGGTA
AAGCTTTTCTGGATGTCATACATCTTTACAGGTTTGTTTTCAAATTTATG
ATTTACATACCTTGCCAGGGTAGTTCATTATCTTGGATCAGAAACCCCTT
CTTCCTGGCTAGTATCCCTGCCACTTCATGATTGTTCAGCATGGTGTCCT
CCAGGTTTTCAGGACCCCCATCTGTAGGCTAAAACCCCCATTTGGTCTCC
CCCCCCACCAACCCTTTGTCCAAGGTTTCAATCGAAAGAATAATTTTGTG
ACCAACCGATTCGCTATATTTTGCATAATAACTTAACAAAATAACGATTT
TCTGCAGTGAAAGCTCAAATGCTGGAAACATAGACACATTTAATTATCTA
TTTGAAATATTATACCTAATCTTTGCACTTTCTACCCCCACTTCCCATAA
AATTTGTGAATATCCCCCATTTGGATTAGTCCTCCCATCAAGGTGAAAAT
ATTCACTTTCCCCTCCAGAGAAAAAGTTGATTCCCCCCATCTTTCTGTGA
TCCCATGTTCAGTTCACAAACATCATAAGAGTGCTTTTACTTGCTATAAA
ATTAAATTGAAATGTAAAACCTACAATCTGATCAATCTGACTCAACTGTT
TTACTATTTTTCATTGTTCTTCATTGTTTCTATAGGGAAAGTAAAAACAA
GAGTCAAGTTGAAAGAGTGCTTAGCATCTGGGTTGAGCGTAATGTGTACG
AAGCTGGTTACGTGAACAAGCTCAAAGAACTACTCAACAATGGAGGTAAA
ATTTAAATAACATGACATGTAATGCAATAAGATAATTGCAAATTAAGTTT
ACGTTCAAACTGATTAAGGGTCGAAAGCGCTTGCAATTTCTGATTGGAAT
TTGTTCATCATGAAGCATTTTGGTTTGGGAATTGCAGGCTTTTTTTGAAG
GTGGCTACACTTCAAAAATACCCAATCAGTGTACCCTTAGAGTTACAACG
ACGTTATTTTCAGTGTTTAACCTTATTCTTATTATGGTTTTAGGGGTGGT
TCAGAACTAGGGGATGGGGGCTTTCCCTGTACCAACCCTTCCTTAACTTT
TGATCTAGTTGGTCTTTTTGGATGAAATTTGACACACAAGTTCCCTAATA
TGTAAGGTAACTTTTGACAAAAAATCTTTTTGATGGCGTCACTCATCATG
CCCAAAGTGAGCAAAAAACGAAAATTTCCTTTGTTCTTCTAAACAGCTAT
TGTATTTAACAACTACTGTATTATCAATTGATATTGGAATTACTGAAATC
GACATACCACTTGAATTTGACTTACTATTTTTTATTTTGATAGTGGCACC
ACAACCTACCTCACCTGTCAAAACATCTCCATTGAAAGTGCAACAAAAGA
GAAGTTCTGTCTCATCTAATTCAAATGTAGTGCAAAGTAGCACAAAGAAA
GGTGTTCCTCCTAATTTCAAGGTAACTGACAATTTTATTTTGTGTGATCT
TGTATGATTTTGTGATTTTAGTTAAAGCTTTATCCAAAGAATAAATTTAT
TCAAAAGCGAAATTTAAGAAAAATATGTTCCTCTGTAATCCTTCAATATT
TTTTTCTCTCTAAGCTCAGTTACAATTCCGTTTCAAAATTTAGCAAACAT
CAACGAATCTCAAATCTATCTCAATAGATCTGCTTTTTTCAAATATATTC
TTGTTCGATTGCAAACACTTTCAAACTAGCCTTTTGATGTCAATGCTCGT
ATGTTCCGTGCTCATGTTCCTATTCTCTCCGAAACTAAATGAAGCCTATA
TTGTTATAAGGGACGTAAGTGAATTTTACCAATTGAATGGCTTCTTTTGA
AAGGGAACCGTAGCATTTGATCATGGTCTTAATTTTTGGAACAATTTGTT
TGTTTTAGGTATCAACTCTACTGATGTCCATAAAGAAGTCGGTCAGTCTT
GACAGTGATGCAGAAAGAAAGTCCAAGAAATTGGAAGGGATGAGAATAGA
CGCCACCAGTGTAGATTCCATTAAGAATGTTAAAGGTGAGCCAAACTGGA
AAAAAACTGTAATAGCTTTGATCTCAAGTCCCTCTCATTTAATATAAAAT
TCACAACAACAAAAAATTAAATAGAAATGGTATCCATAAAGCAGCTTAAA
CCTGTTCGAATATCTTCAGTCCCATTTTGCCAGTTTTTGACCTCGATTTG
ATGAATGCACTTCTCCTTTGATATGAGGCAATAAATTTTCGAAACAACTT
TCTTGGTCTTGCATGAGAGAGGAGATCATTGTTTTCAATTAAAGCTAGTA
TCTATTCATGAGTCTTTTGCTTATTCTGCAAAAATATTCCACAGCTCCAT
TAAAAACGCAGACAATTCATTCCAATTCTTATTTGACACTTTGCAGTCAA
AACATTGTAAACTCTCTGGTTATTAAAATGTTATATTAAAGTGAAGACAT
TGCAGTGTTGAATCGAACAATTAAGTTACGTCACGCGCTATCTTTTGTTT
TGATGATTGGTTGAATAACTGCAATCTCTATGAAGCTCAGCGTTTTTGAA
GCAGCGATTCAGACCTCGGAAAACATAATGTCAATCTGGCTTTAACTTTA
ATTTGGTGTTTAGATCGTTCAAGTGTCGGGCATTTCCATAAAGAGTTTGA
TGATTCGAAGATCATGCTTGAAGATTACATCAACACATTACGTCACAATG
TCCAAGAGAAACAAAAGATCTTACCTTTGCTGAACAGCAGTGAAGCATTT
TATGCTCTAGCTCAAGATGAAGCCAAAGTCATCGTCAATGTAAGATTCTA
CTGATTGTCTGAGATTTTTTATTCAAGACGGAAAAGTTTTCATATCATCC
CGATCTCTTTAACTAGCCAACCCTTGCCCTTGTTTATCAAAGATTATGAA
AAAGCTCTATTGTCTTTACCATTCACATGATTGCTTTCATTTTCGTCAGC
ATTAGAACCATTCCTTTGTTTTCCTGATAGTGGTGTAGTTGTATTTTTGA
AGTGATGATCTTTCAAAAGTGCTGGTTTCATTTGCAACCAAATCATCCAG
TTGATTTCAGCTAGACGGATAGTATTGGCATTGCTCGATCAAGATCCCTT
GTATTTTCTTTGACACATAAGTTCAAGATGGGATAACCCTTTGTGTGTGT
GTGGTGACCTTTTTCAGGTTGAGGTTGGGTGAGTGATCCCGCTATTCTTT
GAGAGTTCAATTCACGGTTATTTCATGTCTCCATTTCTCTATTCAGGCTT
ACAAAACATTTGGCAATCGTTTAAATTCGATGAAAAGAAAACTTGATGTC
AAAATCTCAAAGCTAGAAGATGACGCCAGTCGAACACCTGAAGAACAGAC
GGATTCTCGTGGTCACAAAATGAGATCTTCAAGCGGCGGAAGTATTCAGG
ATATGGACTTA Coding sequence (CDS) from alignment at sc0000408_pilon:3226..6686- >XLOC_002101 ID=XLOC_002101|Name=XLOC_002101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1674bp|location=Sequence derived from alignment at sc0000408_pilon:3226..6686- (Clytia hemisphaerica_ch_hm2_pilon)
CCAGCTAAGGTTGAAAAGCGGATCAGTTTGTTCTATTTGGCAAATGACGT
TATTCAAAATGGACGCAAGAAAGCAAAAGATTTGGTCACTGCATTTGGTA
AAGCTTTTCTGGATGTCATACATCTTTACAGCCAGCTAAGGTTGAAAAGC
GGATCAGTTTGTTCTATTTGGCAAATGACGTTATTCAAAATGGACGCAAG
AAAGCAAAAGATTTGGTCACTGCATTTGGTAAAGCTTTTCTGGATGTCAT
ACATCTTTACAGGGAAAGTAAAAACAAGAGTCAAGTTGAAAGAGTGCTTA
GCATCTGGGTTGAGCGTAATGTGTACGAAGCTGGTTACGTGAACAAGCTC
AAAGAACTACTCAACAATGGAGGGAAAGTAAAAACAAGAGTCAAGTTGAA
AGAGTGCTTAGCATCTGGGTTGAGCGTAATGTGTACGAAGCTGGTTACGT
GAACAAGCTCAAAGAACTACTCAACAATGGAGTGGCACCACAACCTACCT
CACCTGTCAAAACATCTCCATTGAAAGTGCAACAAAAGAGAAGTTCTGTC
TCATCTAATTCAAATGTAGTGCAAAGTAGCACAAAGAAAGGTGTTCCTCC
TAATTTCAAGTGGCACCACAACCTACCTCACCTGTCAAAACATCTCCATT
GAAAGTGCAACAAAAGAGAAGTTCTGTCTCATCTAATTCAAATGTAGTGC
AAAGTAGCACAAAGAAAGGTGTTCCTCCTAATTTCAAGGTATCAACTCTA
CTGATGTCCATAAAGAAGTCGGTCAGTCTTGACAGTGATGCAGAAAGAAA
GTCCAAGAAATTGGAAGGGATGAGAATAGACGCCACCAGTGTAGATTCCA
TTAAGAATGTTAAAGGTATCAACTCTACTGATGTCCATAAAGAAGTCGGT
CAGTCTTGACAGTGATGCAGAAAGAAAGTCCAAGAAATTGGAAGGGATGA
GAATAGACGCCACCAGTGTAGATTCCATTAAGAATGTTAAAGATCGTTCA
AGTGTCGGGCATTTCCATAAAGAGTTTGATGATTCGAAGATCATGCTTGA
AGATTACATCAACACATTACGTCACAATGTCCAAGAGAAACAAAAGATCT
TACCTTTGCTGAACAGCAGTGAAGCATTTTATGCTCTAGCTCAAGATGAA
GCCAAAGTCATCGTCAATATCGTTCAAGTGTCGGGCATTTCCATAAAGAG
TTTGATGATTCGAAGATCATGCTTGAAGATTACATCAACACATTACGTCA
CAATGTCCAAGAGAAACAAAAGATCTTACCTTTGCTGAACAGCAGTGAAG
CATTTTATGCTCTAGCTCAAGATGAAGCCAAAGTCATCGTCAATGCTTAC
AAAACATTTGGCAATCGTTTAAATTCGATGAAAAGAAAACTTGATGTCAA
AATCTCAAAGCTAGAAGATGACGCCAGTCGAACACCTGAAGAACAGACGG
ATTCTCGTGGTCACAAAATGAGATCTTCAAGCGGCGGAAGTATTCAGGAT
ATGGACTTAGCTTACAAAACATTTGGCAATCGTTTAAATTCGATGAAAAG
AAAACTTGATGTCAAAATCTCAAAGCTAGAAGATGACGCCAGTCGAACAC
CTGAAGAACAGACGGATTCTCGTGGTCACAAAATGAGATCTTCAAGCGGC
GGAAGTATTCAGGATATGGACTTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408_pilon | genome | sc0000408_pilon:3226..6686 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-837:166 |
| Aaloc | 499-672:797 |
| Aaloc | 370-495:1504 |
| Aaloc | 244-369:2067 |
| Aaloc | 133-240:2726 |
| Aaloc | 1-129:3462 |
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