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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:481372..483620- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001813 ID=XLOC_001813|Name=XLOC_001813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2249bp|location=Sequence derived from alignment at sc0000236_pilon:481372..483620- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAGCATACTTTTGTAGCAGACTCAATTGAAAAATTCTGTAAAGG
CGATATACCTCATGATTTTATCTTCCGTTACCCATACAAAACGAAAGGTC
AAGTCAACGATGTTATTGTTTGGGATCCTAGAATAATTGAACCGACATGC
ACTATTTTCTGCCCAAAGTGCAAAGACAATGTATTGACTGATAATCGATG
GAAAAATGGTGAAAAATCTTACGAAGGACCGCGCAAGCTGTATGGAGTTA
CTCAAGATGCACTTCTTGTATCCAGAGTCTATCTTTGTAGAAACAACCAT
CAATCGATTGCACATGACCAAGGAATTTTGGAGCAATGTATTTTTATAGA
CACCTTCCCGTTTCATCTTTTTTTCAAATGCGGGATAACAAAAGAGCTTT
ATGATTTCATTATAACACATTTTGACGTTGGTTTGTCTCCATCAGATATC
CAAGTACTATGGCAGCAAACACAATTTAACCACTTTACAAGCATACGTGA
TGAAAAAGAAAATAACTTTGAAAATAAGGGATTACACTTGGCATTGAAAA
TCATCAATTCCTGCATTATCGAAAGATTTTTTAAATGGGAGTCATTATAC
ACCGTTAAAATGACGCAGACCACTGCAACATCATCTATATCTTGCGATCA
TACTTTTAAAGTATCAGCAAATATCGGATTATACATTGACGGTAGCTGGG
TTAAGATTTGTGATAATCTATTTGTTGTTCTAAACGAAAAAGGTATATGT
TTTAATGAAATTTAACTGCCTTATCGGCGGCCCTTTTTACGCCGGCCCTT
ATTACACCAAACGCTAAAAAATAACGCAAATAAGGGCCGGTGTAAAAAGT
ACTGTCTTCTCAGATTTTTCTTCCTTTTATACTGTTTTTAATTATCATTT
CGAATGAAATTGACACGTTCCATCCAAAGAGAAACTCAAAAAAATTAAAA
AATATTTTTGAAAACAACAAGAGTGCAGTTCCACAGGATGCAATTAACGA
TTAATTGTATCAAAATCAGTTAGGGTCAGGGTTGGAGCACAAAACAAGCT
CATATGAAGTGGAGAAGACTAGATAAAACTATTACTGTCTAGTGTACCTT
ATCGGCCTTTTTTACGCCGGCCCTAATTGGCGTTATTTTTGAGCGTTTGG
CGTTAAAAGGGCCGGTGTAAAAAGCGCCACAAAATTGTAACTTTTAGTCT
CGAGCGGCGTTATTTTTGGACCATTTCTAAGCAATATCAACCATGTCGAG
AATGGTTAGTCGATGTTTAGAAGGTAGAAATCCACTACTTTATTTACTTC
TGTTCTGAACATATTGAAAATGTGTTTTTTAAAAGATTCACTCATAAGCT
TCTTCACAAAAAAGAATATTTCAGCACAAAATTAGAGACATGTTTCTATT
TTACAGGCTTAGTTTGCTATATGTGCCAGTTTTGGCGTAATATGTGGCCC
TAATTGGCGTAAGCCCGAAATTGGCCTTTGGCGGAATAAGGGCCGGCGTA
AAAGGGGCCGGCGTGAAAAGGGTCGATAAAGTATCTATTTTTTCAATGTG
CGAATACGATCCTAGCCAATTTTTGACTTTATTATCCGAAACCAAGAGTC
AATTAATATTTCTATGGCGGGAAGGCATTGCATTGCACTGATTTGAATTG
ACGTCACTCAATATAAAACTTATAAAACTCCTTACAAGAGCTTAAGTTAC
GTCAATTCTTCACTTCAAAATGAGTCGATAGCCCACCATGAAAATCAACC
TATGCGAAACTGACCATAATGATGCTTAAAAAACGGTGGAATTGGTCAGG
TACTGGCTAATAAATTCCTTCCTTCCCTTATGAAAGAAGACGAAATATCG
TAAAGAAAATGTACTTTTATCTTTCCTACAGTTATGAACTTCTTGATACA
AAAAATATCAATAGAATAACAGTACACGTAGTTGGGTTGACAAAACGATA
TGAATTTCAGAATGAAAGAAAATATTCGTATAATGTCTTTAGGAGATTTT
TATTGGGTGTTTTTGAATGCGGCAACTATGGTTTAAACTTTGTGAAATGT
GGGTTATTGTATCTTTGGATTTCATTTTTTAGGAGATGTTTTAGCATGGC
AACTAGGACTAGGTGTTGCTTTTGATAACGTGAAAGAAATCCTTTCTGCG
CTGAAAGATCGGTTAAAACGACAAGAAAGTACCATGAAAATGATATTAAT
TGACAACTGCTGTCAATGGAGGTCGAAGCTTGAAAGTGTATTCGGTGAT Coding sequence (CDS) from alignment at sc0000236_pilon:481372..483620- >XLOC_001813 ID=XLOC_001813|Name=XLOC_001813|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000236_pilon:481372..483620- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAGCATACTTTTGTAGCAGACTCAATTGAAAAATTCTGTAAAGG
CGATATACCTCATGATTTTATCTTCCGTTACCCATACAAAACGAAAGGTC
AAGTCAACGATGTTATTGTTTGGGATCCTAGAATAATTGAACCGACATGC
ACTATTTTCTGCCCAAAGTGCAAAGACAATGTATTGACTGATAATCGATG
GAAAAATGGTGAAAAATCTTACGAAGGACCGCGCAAGCTGTATGGAGTTA
CTCAAGATGCACTTCTTGTATCCAGAGTCTATCTTTGTAGAAACAACCAT
CAATCGATTGCACATGACCAAGGAATTTTGGAGCAATGTATTTTTATAGA
CACCTTCCCGTTTCATCTTTTTTTCAAATGCGGGATAACAAAAGAGCTTT
ATGATTTCATTATAACACATTTTGACGTTGGTTTGTCTCCATCAGATATC
CAAGTACTATGGCAGCAAACACAATTTAACCACTTTACAAGCATACGTGA
TGAAAAAGAAAATAACTTTGAAAATAAGGGATTACACTTGGCATTGAAAA
TCATCAATTCCTGCATTATCGAAAGATTTTTTAAATGGGAGTCATTATAC
ACCGTTAAAATGACGCAGACCACTGCAACATCATCTATATCTTGCGATCA
TACTTTTAAAGTATCAGCAAATATCGGATTATACATTGACGGTAGCTGGG
TTAAGATTTGTGATAATCTATTTGTTGTTCTAAACGAAAAAGATGGATCA
GCATACTTTTGTAGCAGACTCAATTGAAAAATTCTGTAAAGGCGATATAC
CTCATGATTTTATCTTCCGTTACCCATACAAAACGAAAGGTCAAGTCAAC
GATGTTATTGTTTGGGATCCTAGAATAATTGAACCGACATGCACTATTTT
CTGCCCAAAGTGCAAAGACAATGTATTGACTGATAATCGATGGAAAAATG
GTGAAAAATCTTACGAAGGACCGCGCAAGCTGTATGGAGTTACTCAAGAT
GCACTTCTTGTATCCAGAGTCTATCTTTGTAGAAACAACCATCAATCGAT
TGCACATGACCAAGGAATTTTGGAGCAATGTATTTTTATAGACACCTTCC
CGTTTCATCTTTTTTTCAAATGCGGGATAACAAAAGAGCTTTATGATTTC
ATTATAACACATTTTGACGTTGGTTTGTCTCCATCAGATATCCAAGTACT
ATGGCAGCAAACACAATTTAACCACTTTACAAGCATACGTGATGAAAAAG
AAAATAACTTTGAAAATAAGGGATTACACTTGGCATTGAAAATCATCAAT
TCCTGCATTATCGAAAGATTTTTTAAATGGGAGTCATTATACACCGTTAA
AATGACGCAGACCACTGCAACATCATCTATATCTTGCGATCATACTTTTA
AAGTATCAGCAAATATCGGATTATACATTGACGGTAGCTGGGTTAAGATT
TGTGATAATCTATTTGTTGTTCTAAACGAAAAAGGAGATGTTTTAGCATG
GCAACTAGGACTAGGTGTTGCTTTTGATAACGTGAAAGAAATCCTTTCTG
CGCTGAAAGATCGGTTAAAACGACAAGAAAGTACCATGAAAATGATATTA
ATTGACAACTGCTGTCAATGGAGGTCGAAGCTTGAAAGTGTATTCGGTGA
TGAGATGTTTTAGCATGGCAACTAGGACTAGGTGTTGCTTTTGATAACGT
GAAAGAAATCCTTTCTGCGCTGAAAGATCGGTTAAAACGACAAGAAAGTA
CCATGAAAATGATATTAATTGACAACTGCTGTCAATGGAGGTCGAAGCTT
GAAAGTGTATTCGGTGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:481372..483620 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 745-909:166 |
| Aaloc | 1-741:2250 |
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