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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000202_pilon:237167..240288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001651 ID=XLOC_001651|Name=XLOC_001651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3122bp|location=Sequence derived from alignment at sc0000202_pilon:237167..240288+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGGGTTGATTACGTTAAATCAAGATCTTGCTGCTGAAGATGTTTGGAA
GATCAACCAGTACAGTGTAATAACCGGTTTCGTTGATCCAGGATGGAAGG
ACTTCAGAAAAAATGTAAGAAgtaaatttatgttttgaagCTAACCTTTC
Ccttgcctgtaccagacgaccacggctttttcccatagatttataagccg
aaagggctagatgtcgggctttaaaaatccgcgaagcttctgattgatca
agcgctgaaattctattgtaatgtcacgtgacttaggtaggatttcctaa
cTAACCACGACACACATTCCAGCAAATGcttgacatctagcccttcgggc
tttataaatctatgctttttcctcgacaccgttCCGTATGTTTCATTTAT
CCCCTAGAGATCCTTTGGGGAATAAAAATACTCGGCTTCAAGCCAATGGA
CCGTAGCAAAAACTCTACCAATAAAATTTGTCACCGCGAATACTATTTTA
ACCTTTCAAGTGAAATAACCTGTTAGTGagctaagggactgggttcgagc
tTAGTTGTTTGTtactatttgtttttttaaggaCGGATTAAATTTTCGTG
AGATCGATAATTTTGGTTCCACGTTTGACCTTTTGACTCTCCGAATGTTG
AACGAAGCAGTATCCAAATATCTTGGTGAAGATGAACCATTTCATGGGAC
AGGTGGTCTGGTCATTACTTTCAACAGTATAAACAAAATGGTATACCAAG
TGGCGATCGTCTCCAACTATACACAAACCTTTGTTGTGATGAATTTGCTG
GAGCTAGGTAAAGGACAAAAGTTTGTGCTTTACACGGAGCTGTCTCCAAC
TATACACAAAGCTAACCAACGGGAAACCGTTATCAGGGTGCAATTAGTCC
TGATTACCAATAaaatccatttcgactgtgaagtAGCCTATGCTaaaaaa
aGCTACGCTCTACGACAGAGACATCCAGAGATTTGCGTAAAAATATCTTG
CAGACACCGAATGATGCCTAACCGTAACAAACAAACTTTGCGCTATAttt
tcagtcagcgaagaagagtttggtataTGCTAACTGTAGCTTATTTCTCT
ACCTTTTACACTGATACTTTTACCTCAGGTCCGTACGGTTTCCACGGAGT
ATCAAATCCGCATTGTCCTTACCCCATGGTGAATTTCATTTCTCAATATG
CAGACGTAGTGGCTTTGAAAGATGGCTCAAATAATGGTGTCTCTGGACAA
TATGTGTATCCCCTGACGGACAGGTTGTGTATAGGTATGTCAAGTTCTCA
TATCTCAATTAGTACAAAGTGTCGCTTCAACATTAATCTTTATATTTCCC
GTTTGTGAAATTTAAACTAACGTTAGAATAATGTCATGTGTGTCCTTTGG
TCgctcttttacttttttttctggACGTGGCATCATCATACATTCAATTC
ATGgcgaatttttcttttttttagattgTGTATTAGTCAAAAATTAATCT
GTTGCATAACCAAAGCTTAAggtcttgttttgaatattatcCCTCAGTAT
ACCAGCAGATTATTTATCATAAAGCTTCAAGAcatttcatatatattata
cagaactttcatatatcattattgttgttattattagcttattataAACA
CTATTTCATTAAGACCCATCTACgatcacaacaacaacaacaacaacaac
aacaaccacgaCCACGACCACGACCTTCAACACCTCTACTCATACTAATA
AACCATCTTTAACTTCAACACTATCGCTTCACAACAATACTGTCCCACCT
CAAACAACAGAGGACAAAGAAGAagataatcaccatggtaatgaTTCACT
CGCAACAACACAAACGCCATTGCTGTATTCAACATTATCACCAACCACAT
CGGGCACCACTTCAACCACGCCCTTCAAACGCCCTGGAAATGATGGTAAT
GGTGGTGAAAATCGAGTCAAAAGTAAACGAGGTGAGCACAccacgttgtt
tcaacgtttattcaatgcaatattcacaacgtccatataacgttaagtGA
AACGTTGAAATATCGTTGTGTTCAACTTGGGTGACAATACAATTGCTTTG
TTACTTCAATCTTATCAGCACACTTTTAGAAGTAGGATAGCAGACTTTGT
GGTCTTTACATTGTTCATAAAAGGTACACAATTTCCACATAACTTTAGAT
GGACGTTTATACAATGTAGCCAGATGGAAGATATGATATTTCTTTGTACA
ATAGATAGGCACTGTGTGTTCACAGAACTCCCTTTCAAGTATGTTTGACT
GTTAAGTCAGCTAGTTGTTTTAGCTTCACTAAATTTACGAAGTGACGGTG
ACACCAGACATTTTTAGAACCTGAATGGTCAATGAAATGGTCAATTTTCA
CTCGCTGCTCTAGAGCAGCGTTGaaaaaaaGTGGCATTAGgttccctctt
ttttctttcccGGCACCATTATCAGCTActcaatgaaaatatatttttag
tccATCCAGTTTCATTTGAATAATGTTTTTCAATGCATTTTATTTTCGTT
GATTTCGATAGTGaaaaaaaTGGTTTGTTCTTAAACCATTAACTTTCACT
AGCATCGTGTTACTTTCTTCGGTCCTGTACTAATAcaggcgcagtagtgt
agtggccATCGTTCTTGACATCCGTGCTGGAGGTCAGGGCATGATtccta
ctggaaaatttagcaaatatTTCGTCTCTGGTGGAAacatacccttgaat
ttcagcccaacTGAGAAATCAACTTTCATtttatccccactcgaaatCCA
ATATTCGAAAATTGTGCTCCgaaaccattcccactggattCTTTAACCTT
AATCCCTAtagggatttcaataggaatttttatccccatttgaggaaaaa
gttccaccgggtctgtgaggtAGGGATGTGAGACTGGGCATACTTCAGGA
CAAAGTTTTTTACATTCTCTTTTCTTAACTTTCGATTTTAGAAAGTCAAG
TATCATCTGAAACAACGTCGATCATTGGTTGGTCTGTTGGAGCTTTTTCT
TTACTCATTTTCTGTATTATTGTGTACGTCGTTTTGAAAAGAAGACCACG
TGATCAGTTCGAACAAGCCTGA Coding sequence (CDS) from alignment at sc0000202_pilon:237167..240288+ >XLOC_001651 ID=XLOC_001651|Name=XLOC_001651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000202_pilon:237167..240288+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGGGTTGATTACGTTAAATCAAGATCTTGCTGCTGAAGATGTTTGGAA
GATCAACCAGTACAGTGTAATAACCGGTTTCGTTGATCCAGGATGGAAGG
ACTTCAGAAAAAATAATGGGTTGATTACGTTAAATCAAGATCTTGCTGCT
GAAGATGTTTGGAAGATCAACCAGTACAGTGTAATAACCGGTTTCGTTGA
TCCAGGATGGAAGGACTTCAGAAAAAATgaCGGATTAAATTTTCGTGAGA
TCGATAATTTTGGTTCCACGTTTGACCTTTTGACTCTCCGAATGTTGAAC
GAAGCAGTATCCAAATATCTTGGTGAAGATGAACCATTTCATGGGACAGG
TGGTCTGGTCATTACTTTCAACAGTATAAACAAAATGGTATACCAAGTGG
CGATCGTCTCCAACTATACACAAACCTTTGTTGTGATGAATTTGCTGGAG
CTAGgaCGGATTAAATTTTCGTGAGATCGATAATTTTGGTTCCACGTTTG
ACCTTTTGACTCTCCGAATGTTGAACGAAGCAGTATCCAAATATCTTGGT
GAAGATGAACCATTTCATGGGACAGGTGGTCTGGTCATTACTTTCAACAG
TATAAACAAAATGGTATACCAAGTGGCGATCGTCTCCAACTATACACAAA
CCTTTGTTGTGATGAATTTGCTGGAGCTAGGTCCGTACGGTTTCCACGGA
GTATCAAATCCGCATTGTCCTTACCCCATGGTGAATTTCATTTCTCAATA
TGCAGACGTAGTGGCTTTGAAAGATGGCTCAAATAATGGTGTCTCTGGAC
AATATGTGTATCCCCTGACGGACAGGTTGTGTATAGGTCCGTACGGTTTC
CACGGAGTATCAAATCCGCATTGTCCTTACCCCATGGTGAATTTCATTTC
TCAATATGCAGACGTAGTGGCTTTGAAAGATGGCTCAAATAATGGTGTCT
CTGGACAATATGTGTATCCCCTGACGGACAGGTTGTGTATAGACCCATCT
ACgatcacaacaacaacaacaacaacaacaacaaccacgaCCACGACCAC
GACCTTCAACACCTCTACTCATACTAATAAACCATCTTTAACTTCAACAC
TATCGCTTCACAACAATACTGTCCCACCTCAAACAACAGAGGACAAAGAA
GAagataatcaccatggtaatgaTTCACTCGCAACAACACAAACGCCATT
GCTGTATTCAACATTATCACCAACCACATCGGGCACCACTTCAACCACGC
CCTTCAAACGCCCTGGAAATGATGGTAATGGTGGTGAAAATCGAGTCAAA
AGTAAACGAGACCCATCTACgatcacaacaacaacaacaacaacaacaac
aaccacgaCCACGACCACGACCTTCAACACCTCTACTCATACTAATAAAC
CATCTTTAACTTCAACACTATCGCTTCACAACAATACTGTCCCACCTCAA
ACAACAGAGGACAAAGAAGAagataatcaccatggtaatgaTTCACTCGC
AACAACACAAACGCCATTGCTGTATTCAACATTATCACCAACCACATCGG
GCACCACTTCAACCACGCCCTTCAAACGCCCTGGAAATGATGGTAATGGT
GGTGAAAATCGAGTCAAAAGTAAACGAGAAAGTCAAGTATCATCTGAAAC
AACGTCGATCATTGGTTGGTCTGTTGGAGCTTTTTCTTTACTCATTTTCT
GTATTATTGTGTACGTCGTTTTGAAAAGAAGACCACGTGATCAGTTCGAA
CAAGCCTGAAAAGTCAAGTATCATCTGAAACAACGTCGATCATTGGTTGG
TCTGTTGGAGCTTTTTCTTTACTCATTTTCTGTATTATTGTGTACGTCGT
TTTGAAAAGAAGACCACGTGATCAGTTCGAACAAGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000202_pilon | genome | sc0000202_pilon:237167..240288 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 817-945:2994 |
| Aaloc | 499-813:1666 |
| Aaloc | 343-495:1131 |
| Aaloc | 115-339:582 |
| Aaloc | 1-114:1 |
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