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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000202_pilon:246357..251686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001650 ID=XLOC_001650|Name=XLOC_001650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5330bp|location=Sequence derived from alignment at sc0000202_pilon:246357..251686+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaaaaaaacatgatgtCAAGTTGGATAAAGTCATTTATCATTTCTGC
GGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGT
TAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCCAT
TTCAAGTTTCTTCAACAGGTAAAGGTCCATTTATCTAGAATGTGATTGCC
CTTCTCTTATCTGAGCCGCTCTTGTTGCCTGTGGGAGAGGGGCAACCATT
TTAGTGTCAACTATTTACATTCGACTGTCTTTAACTCGAAATTCTGTTAT
TccaatctttctgtaatttgtACTAAAATATGTGGTCCCCTTAGCTAAAG
ACTATagtaaattactctctgtaattcgaatctttctcttattcgaataa
aatttttggtTCCTTTAAGATCAAATTAAAAAGAGTGACTTATATATCCA
ATATGATAACTTTTATTTATCAATCTGACAGGTTTCAGAACCATATCCAA
AGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACA
CACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCA
GATACCTCTAGAAAAATTAGTAAGTATACTTAATTACACATCTAAAAGAA
ATTTGCATTTTTGTTCAACTATACTCACTTCCCCTTCTCATAGAATCAGT
AGGATTTTCCCAGCTGATAATGGGAAAACTAACGGACTGAAACCCGGGAT
TGATAAATGCTTTTTATGgctgggatttgaattccattgttttcaagtca
cgAAATCTAGTTGGAATCGAAAATAGCATAAtactttgcagtgaggattt
gtatatttaattattttcagtggggacaaaaattggtgtacagtttacaa
ctttttttttttttttttttttttttttttttttttttttttctttattg
aaacaaaaacacgtgtacactacgaacatattacaaaacattacttaaac
ataaaatatagtccctccccccgctaggaactaacgttatatcgccagag
gtactagactatgtaaaaataaataaataagtaaataaagaaaaaatctt
ggagaaggaagctacaattgttaggtaaaagcctaaaataaagcaccgct
aaaccttccagcttcgttaagaaattcaacaacagaacaaagaatagatt
tatttagatttgaattcaaactttcatccccatataataaaagccgacag
aaaaaaggagggttaagcggcggatgaaaaataatgcctagggtctgaag
tttgtcgaacaaagaatgtcttgcatgggaatatatagagcagtgcagaa
gaaagtgctgagtgttttcaacagagttagttcggcaaccacagaaaggg
tctaaagtgtcgcggaagccatgtctaaatttatgctcgttgagatggct
gaaaccgacccgaagtcgattaagaaagatcactccttgaatgtcaggaa
catcaaaaacatgagattgcttgggtctcaaaaattcatagattgctttt
ttgaaagttttaattgaaggtagatctcgtatattacctcccagaacatt
ccactgagatatgcagtacggaaaaaaagtgttacggaaacgctcagttc
gtatatttagaggataaataggatttcttgttctaaggccacctggtgct
gtaagtcttactggcaggtagttacgtaaatacgaaggggctaaattgtt
aataattccatagaagaatgtcatttcttctagcaaagcgcctgtcagca
agactttcaagaccaagttctgaatatagtttttcttgagacgttccacg
aaaacagcctgttatagctaaacaggcattatattgaatagattcaagct
tctgcacaaaggtagcatttcccgggcggtcatatacgatatcaccataa
tcaagatgaggcctaatgaaagatttataaatggttagtagagatctcct
aggcacatgcttgcgaagccggttaataagaccaattcctttattggcct
tttttatcttctcgtctagatggcgatcaaaagaaagttttgaatctaag
attagaccaagatgtttctggtactcactggtcgcgatattagaattatt
aaaggagattactggagcattaggaggagtgagtctacaggtaaaataga
cttcaatggcttgcttagatgggtcagggttaaaagacatcttccattga
tgagcccagtcagttatcctggagagatctctgttaagtacttcaaggct
caagagttgatcaatcacaagagagaataaagaggtatcgtcagcaaaaa
tcttcggttttgactcaaggttttttggaagatcattaatataaattaag
aagaacacAATGGACCAAGgatcgagccttgaggtaccccagcattgatt
cgctttccactcagatgtttttccatttaacacaactctctgatgcctat
cgttaagaaagctgcgaattaaggaaaacaacggtccagtcaccccataa
gatttgagtttttttttttaagagtaagccatcgtgccacaacccgatcg
aatgcctttgaaatatctaaaacaccccccctggtatctagagaaggatc
tttgtcaaaccctgtataaatatcatgcgttatggataacaactgagaaa
tgcaggaatccccctcccgaaaaaccagactgacaaggagaaaataagtt
attgttttcaaaatacctgtaaagtgtatcgtaaatacacttttcatata
tttttccaaacacaggaagaagagacactggtctgtagtttttggctatg
ctcctgtctccctttttatagacaggaaccacgttacctttcttccactg
tgatgggaagatgccagagttgatgatagaaagattgaatatgctaagca
aaggttttactagagacttaccacagattctgaccatacgagtagaaata
ttatcccacccatgggccttgttaacattcaaagaattaataatagactc
gattttttcttcttcaaatacaagaTTATCCCAGTCtagagttagtaaga
aattgttcaggtggcaaaacactgccagtatcgataagtgagcattggtt
tgagaaaaaagagttaaaaatatcggccttctcagaaacatcacttacaa
ggacgtttctttcatttcgaataggtggaattttcggggttttacgtatg
ttcagaaactgcttcagcgtagaccagtatttcttacttcctatgtttgg
atcatttaaagagttgccaagacgagaaaaataactatccTTGGCAGTCT
TGATGGCCAATCTGCACCTGTCAACCATGTTATCAAGTGTCTGACCATCT
AAAGGATTTCCCCATTTTCTCCAACGACGATTTACAACTGGGGACAACTG
CTCATTCAGGAGATTTGAGTTGCAGTGCAGATGTATTCGCTGAGTACTGT
AAACTGGCTGTGAATATAGAGACAGGGTAAGGCTGTATATGGACTGAAGG
GAGATTAATTATCTTGATATGCTATTATTCAGGTTGGTCCGCCGTATATA
ATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTACATTACAAC
CCAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGAT
CTATCTTATTGATACACACAGGTTTGGATACAATTGTTATAACTTTTCTC
GTGGGTACTGGTAAAGTCGAAAATTCTACAGATATATCACCACGTTACTA
ACCGGCAAGTTGTCTAGCTTGACCCCCCTGCATCAATAGTTGTTTTTTag
cctttttcacaaaattttatctTCTAAGAGGTTCTACCCCAGATTTCCAG
GGCAGGGCAGTATAATTTGTTCATCAAAATTTCCAGGGAGAGTTGGTGTC
GGTACTCCTGTttgaatgttgtttttttttggaataaccCATTAAACGAA
GTCCAAAACTACATATTCTTAATGAGGTGGAGATCGCCTACaataaaggt
cataatattttgataattttggttattttaacgttcttcaagatttaaag
ttccggcgagaaagtcgattttgggctatctctttaatttaatcgaatat
ttcaattcggaaggggttggcagacttacaggctatattctgagccttat
tggactatttttgaacttttggatcctcagatcttaAGTTTCATATTAAa
attcagagttaaaactctacccttccaacctactttagagcatttacaaa
tcgcttgtggttcaaaaacttcccggtgtatttccctcttttctcaaata
ttatgaccttgattgtagcaAGAATTCAAATTTGTTCGGCGTAATGGTTT
GCTAAAATTTACTGTATTCTTGCTAGTCTAGCAGGACAGGCTATGCGTGA
TTAGGgctattaaaggttttgttttgaataagaCTGATATCGTTTGCTGG
CTCATTAATTTTATagtacaagcttttttatattgaattgacacggatgt
ggatcaggattggtcagaaagagaaaaagaaaaacatttttcgcttatat
cagcataatataacaataggcagtcactgtcctgatatgaaatatgtgtg
tGATATCAGACGGAAACActtattctaaaaataaaaccttagaTAAAACT
TAAAAGTTTACTATTTGTGTcctaattttcaggttttagcAAGAGAGTTT
CAAATTTTACTGACTATTATGGTGGCAACCATTCCGACCCATCAACTTAT
GATTTTCCTGGCATGACTGGGGAGGCTGCTCAATGGATCGTTGACAATCG
AGAGGTATAACAGAGAACTTAGATATTCGTAATCTTTGAACCCTAACCCA
AGTGTTAACACAAATGCAAGGTCTTGACAGATCTCACTACAACCTCGCAA
AAACATTGCGCAATGAGTATCATAGATTAACAAACTTTCTCTCATATTTA
TAGATTGCCTCCTTTGGCGTCGACACGCCATCTTTCGATCACGCCAAGGG
CGCCGATGACTGGTATCCAGTGCATCGAGTTTTTCTGAACAAAAACATCT
CTGGATTCGAAAATATGGATTTGTCCAAAATCAATGAATTTCGTGATAAG
AAGGGCGTCTTGATTATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGG
TGGACCCACCCGTATTGTTGCTATGTATGATGACTCGGTGACAGTATCAG
CCTCGTTTTCGTACTGCTATGTTGCTATGGTATCAATCATAGTCCCAGTC
CTGGTTGCATTGGTTAATATGCTGTATTAA Coding sequence (CDS) from alignment at sc0000202_pilon:246357..251686+ >XLOC_001650 ID=XLOC_001650|Name=XLOC_001650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1788bp|location=Sequence derived from alignment at sc0000202_pilon:246357..251686+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaaaaaaacatgatgtCAAGTTGGATAAAGTCATTTATCATTTCTGC
GGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGT
TAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCCAT
TTCAAGTTTCTTCAACAGagaaaaaaaaacatgatgtCAAGTTGGATAAA
GTCATTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATTAC
GTTTCGTTGATTTGTCGTTAAAATATGATGAGAAAAATACACCTTACTAT
GGTATCTATAAAAGCCATTTCAAGTTTCTTCAACAGGTTTCAGAACCATA
TCCAAAGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGG
GAACACACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTT
GATCAGATACCTCTAGAAAAATTAGTTTCAGAACCATATCCAAAGTTTCA
ACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTG
ATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCT
CTAGAAAAATTAGTTGGTCCGCCGTATATAATTGACGTAGAGGCTGAGGT
TGAAAAGAATCGAAGTATGTACATTACAACCCAACATATAATGGATGCTG
AGCAGAAGCAGGGCAAAATTGAAAGTGGATCTATCTTATTGATACACACA
GGTTGGTCCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATC
GAAGTATGTACATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAG
GGCAAAATTGAAAGTGGATCTATCTTATTGATACACACAGgttttagcAA
GAGAGTTTCAAATTTTACTGACTATTATGGTGGCAACCATTCCGACCCAT
CAACTTATGATTTTCCTGGCATGACTGGGGAGGCTGCTCAATGGATCGTT
GACAATCGAGAGgttttagcAAGAGAGTTTCAAATTTTACTGACTATTAT
GGTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCATGACTGG
GGAGGCTGCTCAATGGATCGTTGACAATCGAGAGATTGCCTCCTTTGGCG
TCGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTATCCA
GTGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATATGGA
TTTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATTATCG
CTCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTATTGTT
GCTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACTGCTA
TGTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTTAATA
TGCTGTATTAAATTGCCTCCTTTGGCGTCGACACGCCATCTTTCGATCAC
GCCAAGGGCGCCGATGACTGGTATCCAGTGCATCGAGTTTTTCTGAACAA
AAACATCTCTGGATTCGAAAATATGGATTTGTCCAAAATCAATGAATTTC
GTGATAAGAAGGGCGTCTTGATTATCGCTCTTCCGATGAAAATTGCGGGC
GGAACGGGTGGACCCACCCGTATTGTTGCTATGTATGATGACTCGGTGAC
AGTATCAGCCTCGTTTTCGTACTGCTATGTTGCTATGGTATCAATCATAG
TCCCAGTCCTGGTTGCATTGGTTAATATGCTGTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000202_pilon | genome | sc0000202_pilon:246357..251686 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 568-894:5004 |
| Aaloc | 448-567:4735 |
| Aaloc | 307-444:3583 |
| Aaloc | 169-306:482 |
| Aaloc | 1-168:1 |
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