XLOC_001550.2 (mRNA) -

Overview
NameXLOC_001550.2
Unique NameXLOC_001550.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000058_pilon:1454510..1455705+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001550.2 ID=XLOC_001550.2|Name=XLOC_001550.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1196bp|location=Sequence derived from alignment at sc0000058_pilon:1454510..1455705+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAAAGTTGATGAAGAATATAAAGATATTGAGGTTACAACAAAGGTTGA AATAGTTCTATTCTCCTTTAAACAAAACTATTACAAATACACTTTGCCAA AACTAAATTTAGACAAATCTAAGATATTTGCTTATATGCTTTCAAGGCAT TTTTCATACTTATTTTAATCAtttatgaaaaaactttaactttgagccct ttttttaaagagagcTGAACATCAAATGAGTGGAGGAAAGGAAAATTGGA TAAATGCAGATGAAAACATCCAGGTTATATCTAAGCTTATTGGTTTTatt ctcttttaaaaaatttcatttgataatgtttagcaaaaaaagtttttatt aacAAACAATCTGTTTCTTTTCCATGCATTCAAAGGCATTCTTTGTctta tttattgaattttgagcCTTTTTTATCTAAGATGACTGATCACCAAATGG AccaagaaagtgaaagtgagaTAACTCCagatgaagaaattgaagacATC GAGGTTATTACCCACCTATTATTCTTTTCTTGTCAAAGTTATTTATTGTT TAGAAATAGGCAATATTTCTATCATCGCGTTGAGGAAGATATGGCTGACC ATGAGCTTGGTGAACTAAACATCTAGCACTCAATGAGAACTgacataaaa aagcaaaaaataattaatctCATGTTTCATGCTTTAGAGGCATATTTTAT GTTGACAAGAGGCAGGCAATTTGAGTTCAATATCTCATGCACATACAAAA GCATTaattaattttgcatttttaagaCCACTGGAGCACGAAAAAGATTC AGATGGACAATCAAAGAGGATCCTTCAAAAGAcggcaaacaaaaacaaat tgacAGGCTCAAAAGAGTAAATGCAAGCCAAGCTTATACAATCGACTTac tcaaagaaaaaaatgcttCTTTGACTCTGCGAAATGCTAATTACACGCAT TTGAGAATGCTCGAGCAGTTAGGAGAAACACGCTCTTCGTTAATGGTAGA CGCCTCCCTTTTCTCCAACTCCTTTCATTCTGGTGATGCCATCTTACAGC AGCAAAGTTCAGATATTCTTGACCCTTCGACTTTTCAGGATTTAGCAGTA AAAATATTACCCTGTGGTACTTTTTCTTCCATCAAAAAATTATCCTTTTC AACCAAAGAATCTGTAATATTGAAAACTCTGAAACCAGATAGTTTT

Coding sequence (CDS) from alignment at sc0000058_pilon:1454510..1455705+

>XLOC_001550.2 ID=XLOC_001550.2|Name=XLOC_001550.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000058_pilon:1454510..1455705+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAAAGTTGATGAAGAATATAAAGATATTGAGGTTACAACAAAGGACAA
AGTTGATGAAGAATATAAAGATATTGAGGTTACAACAAAGagagcTGAAC
ATCAAATGAGTGGAGGAAAGGAAAATTGGATAAATGCAGATGAAAACATC
CAGagagcTGAACATCAAATGAGTGGAGGAAAGGAAAATTGGATAAATGC
AGATGAAAACATCCAGATGACTGATCACCAAATGGAccaagaaagtgaaa
gtgagaTAACTCCagatgaagaaattgaagacATCGAGATGACTGATCAC
CAAATGGAccaagaaagtgaaagtgagaTAACTCCagatgaagaaattga
agacATCGAGaCCACTGGAGCACGAAAAAGATTCAGATGGACAATCAAAG
AGGATCCTTCAAAAGAcggcaaacaaaaacaaattgacAGGCTCAAAAGA
GTAAATGCAAGCCAAGCTTATACAATCGACTTactcaaagaaaaaaatgc
ttCTTTGACTCTGCGAAATGCTAATTACACGCATTTGAGAATGCTCGAGC
AGTTAGGAGAAACACGCTCTTCGTTAATGGTAGACGCCTCCCTTTTCTCC
AACTCCTTTCATTCTGGTGATGCCATCTTACAGCAGCAAAGTTCAGATAT
TCTTGACCCTTCGACTTTTCAGGATTTAGCAGTAAAAATATTACCCTGTG
GTACTTTTTCTTCCATCAAAAAATTATCCTTTTCAACCAAAGAATCTGTA
ATATTGAAAACTCTGAAACCAGATAGTTTTaCCACTGGAGCACGAAAAAG
ATTCAGATGGACAATCAAAGAGGATCCTTCAAAAGAcggcaaacaaaaac
aaattgacAGGCTCAAAAGAGTAAATGCAAGCCAAGCTTATACAATCGAC
TTactcaaagaaaaaaatgcttCTTTGACTCTGCGAAATGCTAATTACAC
GCATTTGAGAATGCTCGAGCAGTTAGGAGAAACACGCTCTTCGTTAATGG
TAGACGCCTCCCTTTTCTCCAACTCCTTTCATTCTGGTGATGCCATCTTA
CAGCAGCAAAGTTCAGATATTCTTGACCCTTCGACTTTTCAGGATTTAGC
AGTAAAAATATTACCCTGTGGTACTTTTTCTTCCATCAAAAAATTATCCT
TTTCAACCAAAGAATCTGTAATATTGAAAACTCTGAAACCAGATAGTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_001550.2XLOC_001550.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000058_pilongenomesc0000058_pilon:1454510..1455705 +
Properties
Property NameValue
Aaloc181-600:777
Aaloc109-180:432
Aaloc46-108:211
Aaloc1-45:1