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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:134860..138150+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001441 ID=XLOC_001441|Name=XLOC_001441|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3291bp|location=Sequence derived from alignment at sc0000287_pilon:134860..138150+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCGccagattttgatatttttgacacTGGTGACATGTGTTGTTCT
GGTGAAGTCACGGTCATCGAGGTTTGGCGCCAAAAAGCGCGAATGGCCGG
TAAGCCATATTGTTTGAAACGCTCCTGTCTAAGTGTCCAAGTAGGTGGGA
AACAAACTGTACTGTCTAGATTGGGTCTTTTTTCTGcctaggggccgtcc
acatagtacgtacgcactaatagttctcaaaagcgtatgtttgcgtacag
ggggaggggaggggtcaaaggaaaatgtacgtatgcagattttataacgt
caaaatcagtttttgaccgatatcttcAGATTgacttaatgtaaattttt
cacccagcacttttcgaaatcctctcgttgatacgattgttttgagctat
atatgagagttaaggaataatgggaagcggtgcgcgccacgcaaaatata
tttgggacatgccttaactcacccgaccatttgcgtacgcttgcgtacag
ggggagggggtactcgattttcgacattttagtgcgtacgtactatgtgg
acggccccctaTGTTAAATTGGCTATTTTCATCAGTCTTTACAGTCCATA
TAGCTTTAGCAATAGCAAGATATCTCATTTTTGGATAGGAATTATTTTGT
TTGGTAATGAAAGGTGTAATTTTGAACCGTGTTTAATTATTTAAGGCTTA
GTTTTTTCCCTattcaatttgaaatgaaacaaGCGATGTAATAGGAATAA
CACAGtactttgaaaaaacaattcttGCAATTCAGCTTTTGCTTGATATA
TCAGAGCTATGGATAGAGcgatataacacccctgtgtcacagacccactg
ggagaCAAAGCCCCACCGaaaaatttggcagaaatttcgtccccggtggg
aaaacaCTCTGgaatttcagctccactgggaaaatgactttgatttcatc
gccattcgaaattcaatgtttaaaaattgcactccaaaagcGTCCCCGCT
GGATTTTTTaataggaacaatagaatttttttaaccccatcggaatttca
ataggaaaaatagtttcacaagggctgtgagacaggggtgtaatatcCCA
TAGTTGATAGTTGTTAATTTTCCGATGTGATAGGCCAATACATATCATAG
TGAAAGTTATTTAGTCAATATGAATAGTAAGACTGGGATATTAGAATTTA
CCGTTGTCAACATAAAATTAGGTGTCTTTATCCCTTTTTCAGTGAGTTTG
GATTCAACCTGGTTAGATATTCAAATCAGAGTTTGATTAGTAGCTATCAG
CACATAGCGAACacttttatttaatttcaaataATCACCTCCAGCAGTGC
ATCGGaataattaatttagttttaaatttaaatatattaataatcatcaa
taatttagctgcttttatatatcctatcaaaatcaaaatcagacCTCAAA
TCAAACTCTAGAAATATATACTAATATTTTAAGCCTTTTGATCACATCGG
CGGGGTACTGTCTCCTTGGTTCCCTCGGATTATTCGATTGTGTCAtgacc
aaaatttatttttttaaagtttttaatggTTTAATAAAACGGTTAAATAC
ATcaataaaatattcaaattttggtgGTCTTTCCATTCTCAAGTATAAAA
TTGTTCTCTGGATTTATCTTTTTGCTGACTTTAGATAAGATAAttcataa
aatatataaaacatgCTCTcccagaaaaacataatttggtTCATTAATAT
CGCGATTTAAAACTAACTGCCAAAATCCAAATGAAAGCAGGTCTAAACgt
caaaaaaattctcttacacCGTGTGAAAAAATACATATCCGAAATCttta
taacacccctttcttcaCAGAACCaaataggatttttttcagccattagG
GATATAAGAATATGTACTAGTTAttgcatgacttcgagtgcattTTTCCG
TAATTTTtctcggtaaaatctcggaacaagtaaaatatcgagtattgcac
gagaagtccacaaagccttagggctctgaccatagtcagaaaacagaaaa
ttgattttagtatctgaacataaaagttatgttttaaattctttaacact
tttaacaaagaattgcctttataaattgctttttaatcaaaccccttaag
agtagttaagaacttaattgcaaaaatgacgttatgaactttaaaaatac
gTTAATattatgttgcatcaccttcttttataaaaagtgctaagttttaa
tgggtaattaacctttttgtttcgaacttttttcaaactgtccgcaaaga
attgaactattttaaattttgcggaaaattgttctaaaaagatgtgtcaa
aagttatgactgtttttttaagcaaaatccagatgcaaaattgatgaaaa
accactattttgaagattttgagacaaagaagcatttacaaaaatttccg
caaaaatttttattgttcggtaaaagatacaccatctactgcgaaaaaat
tttcaaaatgttttatcttagccgaaactaagctcttcaaagttgaaata
ctctcgcaaaagtcttcattttcttcttcatcaaattttttcaatgcaat
ttttgagttttcagattcaggaatagtttgtctaacagaaaatgtataac
atgccatagttgtattggttacatcagtcagaaaattttaaacacggcaa
ttatgaaaaattcactatggtcagagcccttaagttaacatgttaacatg
ttcttaacttgttcttaatatttaatattttgttgCATTACTTAGGATAG
AAACATGTATtccactttttttctttcagatcaAATTATGTACAGCAGAT
GAAGACTGTGAAGGAGGGTGTTGCAAaggattgttttgttttcgatATCT
CACTGAAGACGAACGCTGTCTCTTTGGGGTAAGTTGGACCTAATCCAATA
AAATtaggtttttttgaaaaaaTaatatatagcaAGCTGGAATTTTGTCC
AGCTTTTTGTTGCCTTGGAAACAAAACAAATCCTATCAATCTTTATTTGT
ATTTCAGCATCATTTGAAAGTTGGGTGTGGTTGTGAAGCCGGGTTATCAT
GCGAACGAAAGAAATTTTCCTACTCCTGTCAAAAACCTGAAGATGAAGAC
GAAAGTGAAGATAATTTCAATCGAGAATTGGAGGAAATTTTAATGAGAGC
TGAAACACGACGTGCTGTGGCGGATGAAGGTGAAAATGCTGACAATGCAA
GTATTGACAATGAAACAAAGAGAAATGTATCACAATTTTAA Coding sequence (CDS) from alignment at sc0000287_pilon:134860..138150+ >XLOC_001441 ID=XLOC_001441|Name=XLOC_001441|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000287_pilon:134860..138150+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCGccagattttgatatttttgacacTGGTGACATGTGTTGTTCT
GGTGAAGTCACGGTCATCGAGGTTTGGCGCCAAAAAGCGCGAATGGCCGA
TGAATCGccagattttgatatttttgacacTGGTGACATGTGTTGTTCTG
GTGAAGTCACGGTCATCGAGGTTTGGCGCCAAAAAGCGCGAATGGCCGat
caAATTATGTACAGCAGATGAAGACTGTGAAGGAGGGTGTTGCAAaggat
tgttttgttttcgatATCTCACTGAAGACGAACGCTGTCTCTTTGGGatc
aAATTATGTACAGCAGATGAAGACTGTGAAGGAGGGTGTTGCAAaggatt
gttttgttttcgatATCTCACTGAAGACGAACGCTGTCTCTTTGGGCATC
ATTTGAAAGTTGGGTGTGGTTGTGAAGCCGGGTTATCATGCGAACGAAAG
AAATTTTCCTACTCCTGTCAAAAACCTGAAGATGAAGACGAAAGTGAAGA
TAATTTCAATCGAGAATTGGAGGAAATTTTAATGAGAGCTGAAACACGAC
GTGCTGTGGCGGATGAAGGTGAAAATGCTGACAATGCAAGTATTGACAAT
GAAACAAAGAGAAATGTATCACAATTTTAACATCATTTGAAAGTTGGGTG
TGGTTGTGAAGCCGGGTTATCATGCGAACGAAAGAAATTTTCCTACTCCT
GTCAAAAACCTGAAGATGAAGACGAAAGTGAAGATAATTTCAATCGAGAA
TTGGAGGAAATTTTAATGAGAGCTGAAACACGACGTGCTGTGGCGGATGA
AGGTGAAAATGCTGACAATGCAAGTATTGACAATGAAACAAAGAGAAATG
TATCACAATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:134860..138150 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 199-432:3058 |
| Aaloc | 100-198:2830 |
| Aaloc | 1-99:1 |
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