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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:252587..254419- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001410 ID=XLOC_001410|Name=XLOC_001410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1833bp|location=Sequence derived from alignment at sc0000287_pilon:252587..254419- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGGCATTTTCTGCAAAATCTGCAAAAGGCTTGAAGTCAAAACAAA
GCCTATTGATGATAATATCATACCTCTTATTCAAAATCGTGGTCCAGATA
GTTGTCAATCATTGACACGCATTGTCAAGGTTGGATCAGATGAATTGGAA
CTAACATTTTGTAGTACAGTTCTACACTTACGAGGAGAGAGTGTTACCAA
ACAACCATTAATAAATTCAAATGGTGATGTTTTGTTGTGGAATGGTGAGA
TATTTGGTGGACTTGATGTTGGACTACATGAAAATGATACTGAAATCCTC
ATGCGACATTTGACCGCAATCTCTCAAGAAATGCTTGAAAATGTTGAACC
AGCTGAAAAGAATATGGCTGATTTGTTTACAAAGATACAAGGTCCGTGGG
CTTTTGTATTTTATCAAAAATCACTGAATAAACTCTGGTATGGTAGAGAT
TATTTTGGTAGAAGAAGTCTTATACAATCTTCTATTGATGGTAATTTCCT
GCTAACATCAGCTATTTGTGGAGATTTTAGAGAAGAAAGTGAGGAAATCA
AAGCTAAGAGTATTTATTGTTTGAATCTTGTTGATTTGAAAATTGATGAT
TTGTCATTGCCAGCTTTTAAAGAAGCAGCAAAACCGTTTGAAATAAAAAT
ACTGCCTCCAAAACCCAACAAGCACTCTCTTCTTGGATCTATACATAGAT
GTACAATTAATTACCCTCCAAGCGAAAATAAAATTTCAGAGGGGTTAGAA
CATTTGGCAAATATCACTTGCTTTGAGAACGACTCAACGATAGATTTAGC
TGACTGTGTTGGGAATCTTTCAATCAATGACAGTTCTATAGAAAAAATAC
AGGAACAATTTTTACAAGTTCTTAGTGACTCAGTTCGAACTCGAGTTGAA
ACCATCCCTCGACCACTTTTGCAAGATGGTAATCCAGAAACAAGTCTTGG
AATCCTTTTTTCAGGAGGGATTGACTCTGTAGTTTTGGCAGCTCTTGCTC
ATAGACATGTTCCCCCAAATGAAAGTATTGATCTTATCAATGTCGCTTTT
GAAGAGAAAAAGAAAATACCTCAAAATATGAAAAAGAAGTATGCTAATAA
ACCTGGTAATGATAATACTGATGTTAAAAGTTTTAATGTTCCTGATCGAT
TGACAGGAAAAGAAGCTGTTAAGGAACTGCCAGAGGATCGACAATGGAAT
TTCATTGAAGTAGACGTCACTTTAGAGGAACTACAAGCTGAAAGAAAATC
TCGCATAAATGATCTTGTATGTCCCTTAAATACTGTTCTTGACGATAGCA
TTGGTTGTGCCATCTGGTTCGCTGCTAGAGGTATGGGAAAGAGGTATGGT
TTGAATGATGAAAATGAGCTGGAACTTGTAGATGAATGTTACAAATCGAA
AGTGAAAGTATTATTTACAGGAATGGGTGCGGACGAACAGCTTGGTGGGT
ACGCTAGACACCGCACAAAGTATGAGCATGGCGGTTGGACTGCATTACGT
AACGAAATGAAAATGGAAGTGGATAGAATTTCTTCTCGTAATTTAGGTCG
AGATGATAGATGCATTTCAGATCATGGGCGTGAAACTCGTTTTCCATTTT
TGGATGAAAATGTTGTTAGGTTTTTGGATTCACTTCCGGTTTGTGTTAAA
AGTGATCCAAGATTGGAACGAGGTTATGGGGAGAAAATTCTTTTACGTGA
AGTGGCTGAACATCATTTAAAGTTGAATTTCGCTAGTCGATTACCTAAAC
GTGCAATTCAATTTGGTTCGCGTATTGCTAAGCTTGAAAGTGGGAAAGAA
AAAGGAAGTGAAAAGTGTGAACGTTTGAAATAA Coding sequence (CDS) from alignment at sc0000287_pilon:252587..254419- >XLOC_001410 ID=XLOC_001410|Name=XLOC_001410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3666bp|location=Sequence derived from alignment at sc0000287_pilon:252587..254419- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGGCATTTTCTGCAAAATCTGCAAAAGGCTTGAAGTCAAAACAAA
GCCTATTGATGATAATATCATACCTCTTATTCAAAATCGTGGTCCAGATA
GTTGTCAATCATTGACACGCATTGTCAAGGTTGGATCAGATGAATTGGAA
CTAACATTTTGTAGTACAGTTCTACACTTACGAGGAGAGAGTGTTACCAA
ACAACCATTAATAAATTCAAATGGTGATGTTTTGTTGTGGAATGGTGAGA
TATTTGGTGGACTTGATGTTGGACTACATGAAAATGATACTGAAATCCTC
ATGCGACATTTGACCGCAATCTCTCAAGAAATGCTTGAAAATGTTGAACC
AGCTGAAAAGAATATGGCTGATTTGTTTACAAAGATACAAGGTCCGTGGG
CTTTTGTATTTTATCAAAAATCACTGAATAAACTCTGGTATGGTAGAGAT
TATTTTGGTAGAAGAAGTCTTATACAATCTTCTATTGATGGTAATTTCCT
GCTAACATCAGCTATTTGTGGAGATTTTAGAGAAGAAAGTGAGGAAATCA
AAGCTAAGAGTATTTATTGTTTGAATCTTGTTGATTTGAAAATTGATGAT
TTGTCATTGCCAGCTTTTAAAGAAGCAGCAAAACCGTTTGAAATAAAAAT
ACTGCCTCCAAAACCCAACAAGCACTCTCTTCTTGGATCTATACATAGAT
GTACAATTAATTACCCTCCAAGCGAAAATAAAATTTCAGAGGGGTTAGAA
CATTTGGCAAATATCACTTGCTTTGAGAACGACTCAACGATAGATTTAGC
TGACTGTGTTGGGAATCTTTCAATCAATGACAGTTCTATAGAAAAAATAC
AGGAACAATTTTTACAAGTTCTTAGTGACTCAGTTCGAACTCGAGTTGAA
ACCATCCCTCGACCACTTTTGCAAGATGGTAATCCAGAAACAAGTCTTGG
AATCCTTTTTTCAGGAGGGATTGACTCTGTAGTTTTGGCAGCTCTTGCTC
ATAGACATGTTCCCCCAAATGAAAGTATTGATCTTATCAATGTCGCTTTT
GAAGAGAAAAAGAAAATACCTCAAAATATGAAAAAGAAGTATGCTAATAA
ACCTGGTAATGATAATACTGATGTTAAAAGTTTTAATGTTCCTGATCGAT
TGACAGGAAAAGAAGCTGTTAAGGAACTGCCAGAGGATCGACAATGGAAT
TTCATTGAAGTAGACGTCACTTTAGAGGAACTACAAGCTGAAAGAAAATC
TCGCATAAATGATCTTGTATGTCCCTTAAATACTGTTCTTGACGATAGCA
TTGGTTGTGCCATCTGGTTCGCTGCTAGAGGTATGGGAAAGAGGTATGGT
TTGAATGATGAAAATGAGCTGGAACTTGTAGATGAATGTTACAAATCGAA
AGTGAAAGTATTATTTACAGGAATGGGTGCGGACGAACAGCTTGGTGGGT
ACGCTAGACACCGCACAAAGTATGAGCATGGCGGTTGGACTGCATTACGT
AACGAAATGAAAATGGAAGTGGATAGAATTTCTTCTCGTAATTTAGGTCG
AGATGATAGATGCATTTCAGATCATGGGCGTGAAACTCGTTTTCCATTTT
TGGATGAAAATGTTGTTAGGTTTTTGGATTCACTTCCGGTTTGTGTTAAA
AGTGATCCAAGATTGGAACGAGGTTATGGGGAGAAAATTCTTTTACGTGA
AGTGGCTGAACATCATTTAAAGTTGAATTTCGCTAGTCGATTACCTAAAC
GTGCAATTCAATTTGGTTCGCGTATTGCTAAGCTTGAAAGTGGGAAAGAA
AAAGGAAGTGAAAAGTGTGAACGTTTGAAATAAATGTGTGGCATTTTCTG
CAAAATCTGCAAAAGGCTTGAAGTCAAAACAAAGCCTATTGATGATAATA
TCATACCTCTTATTCAAAATCGTGGTCCAGATAGTTGTCAATCATTGACA
CGCATTGTCAAGGTTGGATCAGATGAATTGGAACTAACATTTTGTAGTAC
AGTTCTACACTTACGAGGAGAGAGTGTTACCAAACAACCATTAATAAATT
CAAATGGTGATGTTTTGTTGTGGAATGGTGAGATATTTGGTGGACTTGAT
GTTGGACTACATGAAAATGATACTGAAATCCTCATGCGACATTTGACCGC
AATCTCTCAAGAAATGCTTGAAAATGTTGAACCAGCTGAAAAGAATATGG
CTGATTTGTTTACAAAGATACAAGGTCCGTGGGCTTTTGTATTTTATCAA
AAATCACTGAATAAACTCTGGTATGGTAGAGATTATTTTGGTAGAAGAAG
TCTTATACAATCTTCTATTGATGGTAATTTCCTGCTAACATCAGCTATTT
GTGGAGATTTTAGAGAAGAAAGTGAGGAAATCAAAGCTAAGAGTATTTAT
TGTTTGAATCTTGTTGATTTGAAAATTGATGATTTGTCATTGCCAGCTTT
TAAAGAAGCAGCAAAACCGTTTGAAATAAAAATACTGCCTCCAAAACCCA
ACAAGCACTCTCTTCTTGGATCTATACATAGATGTACAATTAATTACCCT
CCAAGCGAAAATAAAATTTCAGAGGGGTTAGAACATTTGGCAAATATCAC
TTGCTTTGAGAACGACTCAACGATAGATTTAGCTGACTGTGTTGGGAATC
TTTCAATCAATGACAGTTCTATAGAAAAAATACAGGAACAATTTTTACAA
GTTCTTAGTGACTCAGTTCGAACTCGAGTTGAAACCATCCCTCGACCACT
TTTGCAAGATGGTAATCCAGAAACAAGTCTTGGAATCCTTTTTTCAGGAG
GGATTGACTCTGTAGTTTTGGCAGCTCTTGCTCATAGACATGTTCCCCCA
AATGAAAGTATTGATCTTATCAATGTCGCTTTTGAAGAGAAAAAGAAAAT
ACCTCAAAATATGAAAAAGAAGTATGCTAATAAACCTGGTAATGATAATA
CTGATGTTAAAAGTTTTAATGTTCCTGATCGATTGACAGGAAAAGAAGCT
GTTAAGGAACTGCCAGAGGATCGACAATGGAATTTCATTGAAGTAGACGT
CACTTTAGAGGAACTACAAGCTGAAAGAAAATCTCGCATAAATGATCTTG
TATGTCCCTTAAATACTGTTCTTGACGATAGCATTGGTTGTGCCATCTGG
TTCGCTGCTAGAGGTATGGGAAAGAGGTATGGTTTGAATGATGAAAATGA
GCTGGAACTTGTAGATGAATGTTACAAATCGAAAGTGAAAGTATTATTTA
CAGGAATGGGTGCGGACGAACAGCTTGGTGGGTACGCTAGACACCGCACA
AAGTATGAGCATGGCGGTTGGACTGCATTACGTAACGAAATGAAAATGGA
AGTGGATAGAATTTCTTCTCGTAATTTAGGTCGAGATGATAGATGCATTT
CAGATCATGGGCGTGAAACTCGTTTTCCATTTTTGGATGAAAATGTTGTT
AGGTTTTTGGATTCACTTCCGGTTTGTGTTAAAAGTGATCCAAGATTGGA
ACGAGGTTATGGGGAGAAAATTCTTTTACGTGAAGTGGCTGAACATCATT
TAAAGTTGAATTTCGCTAGTCGATTACCTAAACGTGCAATTCAATTTGGT
TCGCGTATTGCTAAGCTTGAAAGTGGGAAAGAAAAAGGAAGTGAAAAGTG
TGAACGTTTGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:252587..254419 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1833:1834 |
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