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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:579416..582607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001209 ID=XLOC_001209|Name=XLOC_001209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3192bp|location=Sequence derived from alignment at sc0000059_pilon:579416..582607+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttcaaaaaatgttccgCGCAAGAACGGTTAatccatttctttttttc
catgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCAT
ATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTCT
CTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCGT
TGTCAATCACGTGACTCCAAACTTCATTTCCGTTTCCGTACCAACCGGGC
GCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataatg
gcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATGG
TTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAAg
catttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTTT
TTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCAA
TTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGAC
AATTCTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATCA
AGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAAA
ACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaactc
ctccaaaatcgaaatcaaaTAAACATTCAAAGCACGcttcatcaaaatca
accaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCacc
gaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTGA
AACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCAG
TTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAAA
GAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCCA
ATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCCT
AAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAAT
GCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGACG
GGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCTT
GAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATCG
TTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGTG
TGGTGTTCTCTAGCAATAAAGTGCTACCACCAcccGCCTCCCCACGCCAA
TCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTGT
ATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAGACACCACCGCCTG
TCTCCCTGAAGAACACACAAGAAACAAGTCCAAACACATCAGGGCCATCT
GGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTCC
AGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCCC
CAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGAA
GACGGATCACCGAGAATTGAAAAATACGTACcaatcaaaattggaaaata
ttccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCAC
CAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCCT
CGTATCGAacccaacaacaacaataataaatTTCTGTATTTGCCAGAGCT
AACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAAG
GTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTAAaact
aattttgataaaaaaagagtCAAATAGACTAACTCGCAAAATCCTTTTCT
TAAAGAGTCAAAAAGTCCTTCTCTTAAAGAAATTGCTAAATTCACCGGTT
AAGCCATAAAATTGGAGTTAATAGTACATaattagactagtaaactagtc
ggttattacttataataaaactgtcaatcaaataatgtaaacactaatta
aatattcagcgcgcgtgagagaaaaggaaaatactcgactagaagcttct
tccaacgCCTTATtctcttcacctaaaatcgtaaggagagacatacagat
ttctctatgtctgacccgtgcgagattgtatttatttttctttctgttta
ttgcatttttggaaatgctcatttatttataagttcccatgtttaatgtt
atatgaaatatcatttagtcaaaaaagttggatggattctcaaaaaccta
aaaaaggttgtaaaattaaacaacgtttttcgaggaaagaagcttctagt
cgttgaaattcagaaaagagcgtgtctttttctttgtcctcacctcttcg
attctttttatttggagcttgaattttttgtatatgggtctgttttcaac
gactagtttactagtctagtacATAATGTGCTTTTCGTATGCCTAAATGG
TAGCAATTTCCCTTATTCcgatcattttttaaaaatcatttctttGAATC
CCCGAAATTTATACATCCAAATTGACTGCAATAGGCGACTAGGCTGTTTT
CTCTCTTAAGGTACCTCACCACTTACTGCAAGTTTCCACGAAATCGATGT
TGAACGAATGGTGTCATCAGATGAACCTTCGTCACCATTCGACGAAGAAA
GTTTCTCACCAAAGTCTTCAAGTTCACCAGAACCGAGCAGTTCATCTGCA
GACCAATATGATTCTTCATCACCAGATGGTCATACATCATTAGATGATGT
GGAGGAGAATCAACAAGAAGTGTATCGCATCTACATGTCTAATTCACCCA
AAGAAGCTTACAAGATCTCTCCACATTCTCCAGGaccaaataaacaaaat
ttgggACACTCCCCCGTTATGCACAAACATCATTTTGAACCCTCCTCCGG
AGGGGAACAAGACGATGAAGACACGCAAGCATCGCCTCGAAGGGGGAGAC
CTAGCCTTAAAGGTGCTCAATACGTTGATACTTTTAAACGACAACCTCAA
CACCAAGTTCGTAGAAAACGGCACAGCGCTAATGCTAAGTAA Coding sequence (CDS) from alignment at sc0000059_pilon:579416..582607+ >XLOC_001209 ID=XLOC_001209|Name=XLOC_001209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4848bp|location=Sequence derived from alignment at sc0000059_pilon:579416..582607+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttcaaaaaatgttccgCGCAAGAACGGTTAatccatttctttttttc
catgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCAT
ATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTCT
CTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCGT
TGTCAATCACGTGACTCCAAACTTCATTTCCGTTTCCGTACCAACCGGGC
GCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataatg
gcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATGG
TTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAAg
catttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTTT
TTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCAA
TTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGAC
AATTCTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATCA
AGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAAA
ACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaactc
ctccaaaatcgaaatcaaaTAAACATTCAAAGCACGcttcatcaaaatca
accaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCacc
gaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTGA
AACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCAG
TTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAAA
GAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCCA
ATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCCT
AAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAAT
GCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGACG
GGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCTT
GAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATCG
TTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGTG
TGGTGTTCTCTAGCAATAAAGTGCTACCACCAcccGCCTCCCCACGCCAA
TCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTGT
ATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAGACACCACCGCCTG
TCTCCCTGAAGAACACACAAGAAACAAGTCCAAACACATCAGGGCCATCT
GGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTCC
AGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCCC
CAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGAA
GACGGATCACCGAGAATTGAAAAATACGTACcaatcaaaattggaaaata
ttccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCAC
CAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCCT
CGTATCGAacccaacaacaacaataataaatTTCTGTATTTGCCAGAGCT
AACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAAG
GTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGtttttcaa
aaaatgttccgCGCAAGAACGGTTAatccatttctttttttccatgtcgt
tTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCATATCATCCA
TTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTCTCTGTTTTC
ACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCGTTGTCAATC
ACGTGACTCCAAACTTCATTTCCGTTTCCGTACCAACCGGGCGCTATCAT
GTGATTTTTCGTTATCGATTtcctggaattttgaaaataatggcGTTATT
AGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATGGTTTCACCA
AGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAAgcatttcag
aaaattttcatttggttCTGTATCGATTTAATTGACATCTTTTTGCCGCG
ATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCAATTCTGGTG
ACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGACAATTCTCA
AGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATCAAGCAGTCA
TCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAAAACCATCTA
CAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaactcctccaaaa
tcgaaatcaaaTAAACATTCAAAGCACGcttcatcaaaatcaaccaaacc
atcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCaccgaaaatga
aaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTGAAACAGTAC
CTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCAGTTTGATGG
TTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAAAGAAAAGCT
ACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCCAATAAAACT
CCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCCTAAAGAAGA
CACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAATGCTAGTAA
ATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGACGGGAGAGTC
ACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCTTGAAGATTT
GAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATCGTTCTAGCG
TAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGTGTGGTGTTC
TCTAGCAATAAAGTGCTACCACCAcccGCCTCCCCACGCCAATCTACACC
TCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTGTATCTCCGA
AGCCAACTTTCAAGGTGACAACCAAAAAGACACCACCGCCTGTCTCCCTG
AAGAACACACAAGAAACAAGTCCAAACACATCAGGGCCATCTGGTCTACG
ATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTCCAGACATCA
ACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCCCCAAAGGTT
GGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGAAGACGGATC
ACCGAGAATTGAAAAATACGTACcaatcaaaattggaaaatattccaaac
tgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCACCAAGGAAA
TCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCCTCGTATCGA
acccaacaacaacaataataaatTTCTGTATTTGCCAGAGCTAACAGGAA
CATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAAGGTATTGAA
TATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTACCTCACCACTTAC
TGCAAGTTTCCACGAAATCGATGTTGAACGAATGGTGTCATCAGATGAAC
CTTCGTCACCATTCGACGAAGAAAGTTTCTCACCAAAGTCTTCAAGTTCA
CCAGAACCGAGCAGTTCATCTGCAGACCAATATGATTCTTCATCACCAGA
TGGTCATACATCATTAGATGATGTGGAGGAGAATCAACAAGAAGTGTATC
GCATCTACATGTCTAATTCACCCAAAGAAGCTTACAAGATCTCTCCACAT
TCTCCAGGaccaaataaacaaaatttgggACACTCCCCCGTTATGCACAA
ACATCATTTTGAACCCTCCTCCGGAGGGGAACAAGACGATGAAGACACGC
AAGCATCGCCTCGAAGGGGGAGACCTAGCCTTAAAGGTGCTCAATACGTT
GATACTTTTAAACGACAACCTCAACACCAAGTTCGTAGAAAACGGCACAG
CGCTAATGCTAAGTAAGTACCTCACCACTTACTGCAAGTTTCCACGAAAT
CGATGTTGAACGAATGGTGTCATCAGATGAACCTTCGTCACCATTCGACG
AAGAAAGTTTCTCACCAAAGTCTTCAAGTTCACCAGAACCGAGCAGTTCA
TCTGCAGACCAATATGATTCTTCATCACCAGATGGTCATACATCATTAGA
TGATGTGGAGGAGAATCAACAAGAAGTGTATCGCATCTACATGTCTAATT
CACCCAAAGAAGCTTACAAGATCTCTCCACATTCTCCAGGaccaaataaa
caaaatttgggACACTCCCCCGTTATGCACAAACATCATTTTGAACCCTC
CTCCGGAGGGGAACAAGACGATGAAGACACGCAAGCATCGCCTCGAAGGG
GGAGACCTAGCCTTAAAGGTGCTCAATACGTTGATACTTTTAAACGACAA
CCTCAACACCAAGTTCGTAGAAAACGGCACAGCGCTAATGCTAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:579416..582607 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1945-2424:2713 |
| Aaloc | 1-1941:1 |
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