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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:568815..572874+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001207 ID=XLOC_001207|Name=XLOC_001207|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4060bp|location=Sequence derived from alignment at sc0000059_pilon:568815..572874+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGTATCAACTTGAAGCTAAAGTTCAAGAAGCTCTTCAAGCAAAACGAAA
ACGGCAGGACATCAATAGCATCTTTGTAGCCCTCATATTTTGTATATCAA
CACTGACAGTTTTTGGTGCTGTTGTCCAACAAAACCTCCCTTTCATCACA
AGCCAAACAACTTTCATCAATGGTAACTATGTACACCATCGCTTCTCAGA
GATTCTGAAATTGAAAGAACTGATTGCGAATCGATCTACCAATTTTTGGT
TTGCTGGTAATTCTCTTGGATATCCGTTTATGACGACACAACCACTTCCT
TTCTTCTCCACTGCTTTCTTTATGACGGTAGcagaaaggtttgttttatt
ttctattaCAAGGTTAAACATATCTTTTGAAATATACCTATCTATTGCAT
CTAACCTGAAAGCTGTCTAACCGTCATGGAGCTTTAACCATTCTAGGTCA
TGTAGACCTAGACTCATGTAGACCGTTATTCCATTGAGCTTACTTTCCGG
GCGGGATGACTTTTCAGACAATACGCATGCACAGTGTATATTTTTGACAT
CATCTGAAATGAAAAACTTCGACTCGTGCccaaaataaaaagtagaacca
ttgtttgttttttctagTCTCAGCTCAGCTGAAAAAACATCCAGTCAGGG
GAAACTAAGATCAATATTGTTTCAATAGAACATGCACTTCCTGGCATTTC
AACATTAAGGTTTCATGCTTTTAAGACTTTCACCATTCTTGTTTTTCAGA
TTTCTTGGATTATCCGCGCTATGTTTCATGAGGAATTACATGCTGATTTT
AGTCATAGCTCTCCCTATATCCTGGTACATTGGTTGCCGTAAAATGAAAG
CATCGCGTGTTCAGAGCTTGTTCACTGGCCTCTCTGTATTCTTGATAACG
AGTCAGCTGCAGAACGGATTTGAGATTCATGAATACTTGATTGAAGGAAA
TGTTTGTTTGCTTTACGCCCATCTGTTGTTCCCACATACAGGtaattttt
ttggacctacctttggggtcctataaattaattATTATGATCCTTGGCTG
AAAGATAGAGGGCAATGTTCCCAAAAAAGTGGCTGAATGAAGCCGttttt
taccggaaaatattttttcggcgttaaaatcgggttattcactttttctt
tttcatattgaaATACCTAATGTTCAAATTTCCAAAGctattcaaaaagt
ctctcaaatCATCCTCAAATATCACAAGAAATGTTTTTCgtctaattttc
cttggaaaatacaactTATTGTTTGAAGGATATTTTCCTTGGAATATACG
ATATTTTCGATGTGATTGTGTTCGATCTTTCAGGATCTTTTTGGTCGAAA
GATCTAAGGGATGATTGTAAAGATtacctttaaaaatatttgccTACTCA
CTATTTTCCCAAGTCgaaagtttttataattttctcgcaaatattttttc
ttaacctATCTTTCTGACAGTGTTTCTGATAATACAATCGACAATTTCGG
CAACAAAACATCCTTTCTTTTTTCCTAGTTGCGCAGATTTATCATCACGC
TTTCCATCCTGACACTACTGAATCTCCATTCTTCTTACTATGCTTAACAT
TCCTTTGTTCAACATTCACTGGCATCTACTGTTCATTACTGAGTCTGACA
TCGAGTCTGGCCGTTAGTTGCAGTGGTATCAACCAAAACATATCCACTAA
AAGTGTAATCAAATCATGGCTTGGAATGAACTGCAAAGTTTTATGCTACA
TCTCATGGATGATTATCCCTACTCTCATTTCTTTACCATATTTCGGTGCA
CAAGTCCGAGAATCAACGGGTGGATTCAACATTCCCAGCTTGGTCAATAT
GCTCATCAATGGTAACCTGTTTGATTATAACCAAGGTCATTATTACATGA
CTCTGCTGGTGACCTCAGGAACAATCTTATCCCTAATCCGTTGTTATTAC
TACTACAAATCGAATCTGGCAATCAAGCTTTTGAACCGTCAAGCAACTTT
TATATGCTGGATCTTGGGAATGTCATTTTTCTCCATCTTACTTTATGTGG
ATCAAAAGGTCTGGACAATGCTAACCAACATGTTGCCGGTGAACTTCAGT
CTCAATAAAAGTGCATCCATCATTGGCCTTCAAGCTTTTGGATGTTTCTT
ATCTGGTATTTTCCTTGAAAAGCTTGTTGAGCTGTTTTGCACGAGCTCTA
TTGAATTTGATAACTGGTCCAAAGGGAATTTAGCTTCACCTCCTGACTTG
TACAATTACAAATGGAAGAAAATCACCGCAGTAGTGTTTATTGGGTTGGT
CATGATTAAGAGTGGAGCTGACCGTGTCTGTGAGAAGACAGCGTTGTTGG
AGATGAATGAGACATTCGAACAGGCAATCGAGGAAATGACATCTAAAAGT
AACAACAAAGAGGGTAGAATCTTAACCAATATCAAACTAGGTATGCCGTC
TGTtggttttttattataagatcaatggaaaaaaagacaataaatcCAAG
GTTCTTTTATAGATCTTTCCTTTCTTTTAAAACAATGAGATATGATTGAT
TTTTGATGTTGATCATTTTTATCATATAGATATTCTCATGTTATGACCAG
TGTTGTGGACCTCAGTATAACGATTTTCCGATGCATAACGTCAACGTCAC
TTCGAAAACGTGTGTTGTACCCTGTACCCTGGCTCAATCACTAATCAGCA
ATATTATTTCAATGTTTGATTCTCTTTTGTTAGGTTCAGGAAACTCATGG
GATTTGTCAAATATTCCAATCCAAACAAAATTACCAGGTATTCATTTTCT
TATTAAAATCGTTCAACAGATTTATATTAACACAGATTAAATATGCTTGT
AAATCGTTTTTACTGTCCAGTAGAATCTAACAGTCCAAAGTGTCTTTAAA
ATAGTTATTTATTAAAACCATTCGCAAAAAAGTGATTGCATCGAAAGTTA
CAACCTCTTAAGGTGGCTCGTTGGAGTGGGAAAACTTTTTCTTGCTATTT
CTTTGCACTTAAACGGACCCCCTTTTAGAGACAGTaacttttttctatat
ttttaggGGCGATGTCTTACTCATCTGAGTGGTATGACAGTCTATCAGTG
TTCTATGTCGATTCCATCAAATTCCACAATGTTAATATCATGGACATGAA
AAAGATCTTACAGCTATATAACATTCGATATTTGGTTCTATCCACTCATA
TTCTGAATGCAAAGTTCCAGGACTTATCTCATTTCAAGACGCTGGCACAG
TCTGATGATATCACCTTCCTAGAGGTTGTGTATGATTTCACCAAGAGGCG
TCCGTCATACTTCGACATGGTTCACCTACCCGGCTTTGTCAATGGGAATC
TGAATAATATGCGAGAGACAGTACAAAGGACGCTTGAGTTGTATAAAGAT
AACGCCTTGTTGTATTTGAATCCAAGACAAGGCAATCGTGTCAAAAATGA
AGGCATTATCAATGTCCAGGTCAGTACTTTATCCAATAAATGATAGTATC
GAACAAAGTTGTTCAAAAACGGAAAGTTTTAAAGCTCTTTAAGGGCTTTC
TAGCTGGCTCCAGAACATGTTTGATTTATTTAGGATTAttgtaaaaaatc
tggaaatgaGTTTTTTCGAGAACACTGTAGGCTTATCACtcagaaaaata
ttgttaactCACCACTCAAACTACTCAAAGCGCACCAAAAATAGaaggtt
tttaaaaactttgacgtTCTTATTACTTGTATAGCGCTTGGTGTCCATAC
GCCCATTTATTTAATTGATTGAGTGAAAACCTCTTTTTATCAGAACTTTG
ATAGCCCGGaaaaaaaTAAGACTGCAAGATCCCCCCGTCTTTTCCAGGTG
ATGAGGATCCCAACAAACAATGATGCATCATTGGTGACGTGGCGAATGAA
CGGTCAAGGGATGAACTCTGAAGAAATCATCAAACAAATGCATTCTTCAT
ACGAAGATCATTATGAAGAAGAGTATGACGTCATCCAATCCAAAATCATT
GAAGAAAAGAATAATGGACTTGAATATCATGTTATTGTTGAGGTCAATCA
TAATCCATCG Coding sequence (CDS) from alignment at sc0000059_pilon:568815..572874+ >XLOC_001207 ID=XLOC_001207|Name=XLOC_001207|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4344bp|location=Sequence derived from alignment at sc0000059_pilon:568815..572874+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGTATCAACTTGAAGCTAAAGTTCAAGAAGCTCTTCAAGCAAAACGAAA
ACGGCAGGACATCAATAGCATCTTTGTAGCCCTCATATTTTGTATATCAA
CACTGACAGTTTTTGGTGCTGTTGTCCAACAAAACCTCCCTTTCATCACA
AGCCAAACAACTTTCATCAATGGTAACTATGTACACCATCGCTTCTCAGA
GATTCTGAAATTGAAAGAACTGATTGCGAATCGATCTACCAATTTTTGGT
TTGCTGGTAATTCTCTTGGATATCCGTTTATGACGACACAACCACTTCCT
TTCTTCTCCACTGCTTTCTTTATGACGGTAGcagaaagAGGTATCAACTT
GAAGCTAAAGTTCAAGAAGCTCTTCAAGCAAAACGAAAACGGCAGGACAT
CAATAGCATCTTTGTAGCCCTCATATTTTGTATATCAACACTGACAGTTT
TTGGTGCTGTTGTCCAACAAAACCTCCCTTTCATCACAAGCCAAACAACT
TTCATCAATGGTAACTATGTACACCATCGCTTCTCAGAGATTCTGAAATT
GAAAGAACTGATTGCGAATCGATCTACCAATTTTTGGTTTGCTGGTAATT
CTCTTGGATATCCGTTTATGACGACACAACCACTTCCTTTCTTCTCCACT
GCTTTCTTTATGACGGTAGcagaaagATTTCTTGGATTATCCGCGCTATG
TTTCATGAGGAATTACATGCTGATTTTAGTCATAGCTCTCCCTATATCCT
GGTACATTGGTTGCCGTAAAATGAAAGCATCGCGTGTTCAGAGCTTGTTC
ACTGGCCTCTCTGTATTCTTGATAACGAGTCAGCTGCAGAACGGATTTGA
GATTCATGAATACTTGATTGAAGGAAATGTTTGTTTGCTTTACGCCCATC
TGTTGTTCCCACATACAGATTTCTTGGATTATCCGCGCTATGTTTCATGA
GGAATTACATGCTGATTTTAGTCATAGCTCTCCCTATATCCTGGTACATT
GGTTGCCGTAAAATGAAAGCATCGCGTGTTCAGAGCTTGTTCACTGGCCT
CTCTGTATTCTTGATAACGAGTCAGCTGCAGAACGGATTTGAGATTCATG
AATACTTGATTGAAGGAAATGTTTGTTTGCTTTACGCCCATCTGTTGTTC
CCACATACAGTTGCGCAGATTTATCATCACGCTTTCCATCCTGACACTAC
TGAATCTCCATTCTTCTTACTATGCTTAACATTCCTTTGTTCAACATTCA
CTGGCATCTACTGTTCATTACTGAGTCTGACATCGAGTCTGGCCGTTAGT
TGCAGTGGTATCAACCAAAACATATCCACTAAAAGTGTAATCAAATCATG
GCTTGGAATGAACTGCAAAGTTTTATGCTACATCTCATGGATGATTATCC
CTACTCTCATTTCTTTACCATATTTCGGTGCACAAGTCCGAGAATCAACG
GGTGGATTCAACATTCCCAGCTTGGTCAATATGCTCATCAATGGTAACCT
GTTTGATTATAACCAAGGTCATTATTACATGACTCTGCTGGTGACCTCAG
GAACAATCTTATCCCTAATCCGTTGTTATTACTACTACAAATCGAATCTG
GCAATCAAGCTTTTGAACCGTCAAGCAACTTTTATATGCTGGATCTTGGG
AATGTCATTTTTCTCCATCTTACTTTATGTGGATCAAAAGGTCTGGACAA
TGCTAACCAACATGTTGCCGGTGAACTTCAGTCTCAATAAAAGTGCATCC
ATCATTGGCCTTCAAGCTTTTGGATGTTTCTTATCTGGTATTTTCCTTGA
AAAGCTTGTTGAGCTGTTTTGCACGAGCTCTATTGAATTTGATAACTGGT
CCAAAGGGAATTTAGCTTCACCTCCTGACTTGTACAATTACAAATGGAAG
AAAATCACCGCAGTAGTGTTTATTGGGTTGGTCATGATTAAGAGTGGAGC
TGACCGTGTCTGTGAGAAGACAGCGTTGTTGGAGATGAATGAGACATTCG
AACAGGCAATCGAGGAAATGACATCTAAAAGTAACAACAAAGAGGGTAGA
ATCTTAACCAATATCAAACTAGTTGCGCAGATTTATCATCACGCTTTCCA
TCCTGACACTACTGAATCTCCATTCTTCTTACTATGCTTAACATTCCTTT
GTTCAACATTCACTGGCATCTACTGTTCATTACTGAGTCTGACATCGAGT
CTGGCCGTTAGTTGCAGTGGTATCAACCAAAACATATCCACTAAAAGTGT
AATCAAATCATGGCTTGGAATGAACTGCAAAGTTTTATGCTACATCTCAT
GGATGATTATCCCTACTCTCATTTCTTTACCATATTTCGGTGCACAAGTC
CGAGAATCAACGGGTGGATTCAACATTCCCAGCTTGGTCAATATGCTCAT
CAATGGTAACCTGTTTGATTATAACCAAGGTCATTATTACATGACTCTGC
TGGTGACCTCAGGAACAATCTTATCCCTAATCCGTTGTTATTACTACTAC
AAATCGAATCTGGCAATCAAGCTTTTGAACCGTCAAGCAACTTTTATATG
CTGGATCTTGGGAATGTCATTTTTCTCCATCTTACTTTATGTGGATCAAA
AGGTCTGGACAATGCTAACCAACATGTTGCCGGTGAACTTCAGTCTCAAT
AAAAGTGCATCCATCATTGGCCTTCAAGCTTTTGGATGTTTCTTATCTGG
TATTTTCCTTGAAAAGCTTGTTGAGCTGTTTTGCACGAGCTCTATTGAAT
TTGATAACTGGTCCAAAGGGAATTTAGCTTCACCTCCTGACTTGTACAAT
TACAAATGGAAGAAAATCACCGCAGTAGTGTTTATTGGGTTGGTCATGAT
TAAGAGTGGAGCTGACCGTGTCTGTGAGAAGACAGCGTTGTTGGAGATGA
ATGAGACATTCGAACAGGCAATCGAGGAAATGACATCTAAAAGTAACAAC
AAAGAGGGTAGAATCTTAACCAATATCAAACTAGGTTCAGGAAACTCATG
GGATTTGTCAAATATTCCAATCCAAACAAAATTACCAGGTTCAGGAAACT
CATGGGATTTGTCAAATATTCCAATCCAAACAAAATTACCAGgGGCGATG
TCTTACTCATCTGAGTGGTATGACAGTCTATCAGTGTTCTATGTCGATTC
CATCAAATTCCACAATGTTAATATCATGGACATGAAAAAGATCTTACAGC
TATATAACATTCGATATTTGGTTCTATCCACTCATATTCTGAATGCAAAG
TTCCAGGACTTATCTCATTTCAAGACGCTGGCACAGTCTGATGATATCAC
CTTCCTAGAGGTTGTGTATGATTTCACCAAGAGGCGTCCGTCATACTTCG
ACATGGTTCACCTACCCGGCTTTGTCAATGGGAATCTGAATAATATGCGA
GAGACAGTACAAAGGACGCTTGAGTTGTATAAAGATAACGCCTTGTTGTA
TTTGAATCCAAGACAAGGCAATCGTGTCAAAAATGAAGGCATTATCAATG
TCCAGgGGCGATGTCTTACTCATCTGAGTGGTATGACAGTCTATCAGTGT
TCTATGTCGATTCCATCAAATTCCACAATGTTAATATCATGGACATGAAA
AAGATCTTACAGCTATATAACATTCGATATTTGGTTCTATCCACTCATAT
TCTGAATGCAAAGTTCCAGGACTTATCTCATTTCAAGACGCTGGCACAGT
CTGATGATATCACCTTCCTAGAGGTTGTGTATGATTTCACCAAGAGGCGT
CCGTCATACTTCGACATGGTTCACCTACCCGGCTTTGTCAATGGGAATCT
GAATAATATGCGAGAGACAGTACAAAGGACGCTTGAGTTGTATAAAGATA
ACGCCTTGTTGTATTTGAATCCAAGACAAGGCAATCGTGTCAAAAATGAA
GGCATTATCAATGTCCAGGTGATGAGGATCCCAACAAACAATGATGCATC
ATTGGTGACGTGGCGAATGAACGGTCAAGGGATGAACTCTGAAGAAATCA
TCAAACAAATGCATTCTTCATACGAAGATCATTATGAAGAAGAGTATGAC
GTCATCCAATCCAAAATCATTGAAGAAAAGAATAATGGACTTGAATATCA
TGTTATTGTTGAGGTCAATCATAATCCATCGGTGATGAGGATCCCAACAA
ACAATGATGCATCATTGGTGACGTGGCGAATGAACGGTCAAGGGATGAAC
TCTGAAGAAATCATCAAACAAATGCATTCTTCATACGAAGATCATTATGA
AGAAGAGTATGACGTCATCCAATCCAAAATCATTGAAGAAAAGAATAATG
GACTTGAATATCATGTTATTGTTGAGGTCAATCATAATCCATCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:568815..572874 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1984-2196:3848 |
| Aaloc | 1573-1983:3059 |
| Aaloc | 1519-1569:2736 |
| Aaloc | 607-1515:1531 |
| Aaloc | 364-603:751 |
| Aaloc | 25-360:1 |
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