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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:404163..407584+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001114 ID=XLOC_001114|Name=XLOC_001114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3422bp|location=Sequence derived from alignment at sc0000049_pilon:404163..407584+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGGAGCATCATTCCGCAGAGAGTTCCATATGGCGTTTCTTCTTGG
TTTATCCTTCGGCTTCTTTATTGCTGTCATATTTCGTGAATTGCAATCTT
CGTTTTCTGAAACCAAAGATTTGGTCAACAAAGGACCACCATCTGGCAGG
TAAGCGTTTATTCCGATTTTACCATTATATCCCAATTAGCACAGCCTTGA
TTAATCCTTGAGTGAAGCAGTACACCTCAGTACATTCAAGATTTGTAGTG
CTATATTAGACTTAAGAAAAGAAAACGGAGGTCTATTGCAAAAGTTTATA
TACAATCTCCCTGGTAGACGCTGAAGTATAGAATTTACCACCTAGCTCTT
ATCTTAAAGATGGTTTCCACTATCGAAGTTGTTTGACAATATTCAACAAA
GCGTCAAGAGAAAGTACCACTCCTGAGTTGGATAAATCACGATAGCCTGG
ATAAAAGTACCGTTGCACAATAGAAACTATAAGCGTCAATAGTCGCAAAC
TATCTGCCGAACCTTAAATATCTTACCTACCTCTACAAGCTCATTCATTA
CGTATTATCGCATTTTCCATTCTTCCTTATCAcaggaaaaattaaataaa
tcacCTTGTCGGGGAATGTACATGTCACACCTGAGAACATGAATGATTTT
CCCACCCTGGTGGAATTCCTGCACATTCCAAGGCGTGAAATGCTCTTTTC
CCACCCTGGTGATCAGCTCAATTTTTCTTGTTGATAGCTCCAGATGATAA
GCATgcgtccatcagtaacgtaaataaaaccTGGGATAGAAGAGGAGGTT
GCTACCTTCATGGTTGCACGATCTAATGTAATTCTTTCTTGTAATTCTTC
TGATCCAATAGAGCAATGGAAGAAGATTATGCCATGCTATTAAGTGAAGA
ATATGAAGGAAAACATTTGCCACCTCCTTCCAAACCTCAACCTGTTGATA
AACCAATCATATTCAATGATCTAGATTCTATACATCATAAAGGTATATTA
CAGTccctataactcgaacctttatTACTtggaatgtctccttaactcaa
acattattttgaaagatcttatctttccttgatttgaaGTAAAAACTGAT
ACAAACATCCCATCTTACAGCTTTGGTTGGACTTCTTCCCACAAGTAGGA
AGAAAATTTCCATCGAAATCCCGATTGGGATAGAAATCTTATGGTTTAAA
GGACAAAGTCAAAATTAATTCTTTAGTTAATGATATATGATATAGAAGGG
AACATGATCTCTTATGCTaacaaaacattaaaacaatccaatcgaatttc
tcaaagtttgtTCTCGCGCGGtgcagaaagaagaaagaaaagttgatctt
tctttttgtttaaaaatgctgtgtaatcGAATAGTAGGAGGTACGTTAAA
TCATGTCGTATAAGGATAGTCAAATACCAGCGAAACTTTTTTCTCACATT
TTCAGGTGGTGACCGAGTTGCTAAATTACTTTCGAAGAAGGTTCGAATTC
TATGTTGGATCATGACGCAACCGAAAACATTGAAAACCAAAGCACAAGCT
GTCAAGAACACGTGGGGAAAACGTTGTAATACACTGCTGTTCATGAGTTC
AAAGGGTGATAAAGATTTCCCAGTAGTTGGGCTGAACGTACCAGAAGGTA
AAATCTCATTTGATgagaattttatttcaatatattatatatagagaggt
ttatctaaagaatcctgcattactaaaagtaaccaaaagaacgacaaatt
tcaccaTTCATAACCCCGACAGAAAGTGACCACCCTTACATATTCATTCC
TTTTTtattatcacgggaattaactacatgcggtttaaaagaacgacaaa
ttatgcatgcgtgttacaatgcagaaTTCTTTAGAGGGACAGACTGATAT
TATTACCTGATATTATCTGATACCATATAGGTTCTAttcttatttttatg
ttttggaCGTTAGATAGAAATTGTGTTGACGTTAGGCTTGGCTGGTAGTA
TCCTCTTATATGTTCTGTTATAACTTATGATAAAAATTATCTTTGTATTA
TGCGCGGCCAACCTTATTTTGGGCGGGGTTGGTTTCGCTAAGCTTTTCAT
GGTGTTTCAATGCAGATTCTGGAGatgagtttgaaaaaaaaattcacagt
gTACAAGCCAACCCAGTTTCTTAACCACCTAGCCTGGTgtgttggcaaac
gatatcatactccaggatgcaagtgaaatttttcaatccgcggACGTAGA
CGGGggtttggttattatcagttaggattagcgttggagctcgagagtca
caatatcaggccgaaggccttcttaggggcattcgcACCCTGTGACTTAA
CTTTGGATCCcctagggatccttgtaggggcaccggtagggttgggagct
ttcttaattaaggtctgtaaattacacgttataagtatttgtgaatgaca
gctttTTGTCGTGTCTCGATGGCGCAAGCGGTTAGGCTGGTATGTAAACC
AAgattgcttgcatttggtggttcgagccggggtcgatgacctgtttcac
cggtacgggcaaatttcagaaaaatacttagaaaacggttagaaacactt
gagaacgatagaaaatcaggatagaagataagaaagtagaaaataggggg
aaaataagagacgatgcatcctggagtatgatatcgtttgccaacctaGC
CAACCACCTTCCAAACTTAGTCGGCGTCTCTTAGACTGTTTATTACCTGG
CACGTTGGTAAAGTCAGCACTATTTAGCACTTTTTATCTGTGTTTTCTTC
TAATCTtgcttttatttcttttcatccAGGTCGAAAAAACTTGTGGTTGA
AAACACGCGCAGCTTGGAAATATATTTACGAGCACCATTTCTACGACGCT
GATTGGTTCTTAAAAGCCGATGATGACTCATTTGTCGTTCTCGAAAATCT
ACGTTATTTCTTATCAAAGCATAATTCAAGTCAGACTCATTATTTTGGGC
GACATTTCCGCCCTTTTGGCGGCTACAACTCTGGTGGGGCGGGCTATGTT
TTCAGTAAAGCCACCCTGATAGTATTCAACCAAGTACTACGTGATCCAAG
TGTTTGCAAACTAAAAGCAGGCGCCGAGGATGCAGAAGTAGGCGTTTGTT
TACGAATGATGGGCGTTGTGCCCGGTGATACTAGAGACGAATTTGGGCGT
GAAAGTTTCCACCCGTTTGCGCCTGATTATCATTTAGTACCGAATGGTAT
ACCCACTACGAACTGGTTACATAAATATAATAAACATCCGGTCAAATCGG
GACCTGGATGTTGTTCAGACCATAGTATAGCTTTTCATTATATTCCGCCA
AACCGGATGTATGTGAtggaatattttatttatcatttGAGGCCGTTCGG
TGTGCACCACGTACACAACTGA Coding sequence (CDS) from alignment at sc0000049_pilon:404163..407584+ >XLOC_001114 ID=XLOC_001114|Name=XLOC_001114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000049_pilon:404163..407584+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGGAGCATCATTCCGCAGAGAGTTCCATATGGCGTTTCTTCTTGG
TTTATCCTTCGGCTTCTTTATTGCTGTCATATTTCGTGAATTGCAATCTT
CGTTTTCTGAAACCAAAGATTTGGTCAACAAAGGACCACCATCTGGCAGA
TGGTTGGAGCATCATTCCGCAGAGAGTTCCATATGGCGTTTCTTCTTGGT
TTATCCTTCGGCTTCTTTATTGCTGTCATATTTCGTGAATTGCAATCTTC
GTTTTCTGAAACCAAAGATTTGGTCAACAAAGGACCACCATCTGGCAGAG
CAATGGAAGAAGATTATGCCATGCTATTAAGTGAAGAATATGAAGGAAAA
CATTTGCCACCTCCTTCCAAACCTCAACCTGTTGATAAACCAATCATATT
CAATGATCTAGATTCTATACATCATAAAGAGCAATGGAAGAAGATTATGC
CATGCTATTAAGTGAAGAATATGAAGGAAAACATTTGCCACCTCCTTCCA
AACCTCAACCTGTTGATAAACCAATCATATTCAATGATCTAGATTCTATA
CATCATAAAGGTGGTGACCGAGTTGCTAAATTACTTTCGAAGAAGGTTCG
AATTCTATGTTGGATCATGACGCAACCGAAAACATTGAAAACCAAAGCAC
AAGCTGTCAAGAACACGTGGGGAAAACGTTGTAATACACTGCTGTTCATG
AGTTCAAAGGGTGATAAAGATTTCCCAGTAGTTGGGCTGAACGTACCAGA
AGGTGGTGACCGAGTTGCTAAATTACTTTCGAAGAAGGTTCGAATTCTAT
GTTGGATCATGACGCAACCGAAAACATTGAAAACCAAAGCACAAGCTGTC
AAGAACACGTGGGGAAAACGTTGTAATACACTGCTGTTCATGAGTTCAAA
GGGTGATAAAGATTTCCCAGTAGTTGGGCTGAACGTACCAGAAGGTCGAA
AAAACTTGTGGTTGAAAACACGCGCAGCTTGGAAATATATTTACGAGCAC
CATTTCTACGACGCTGATTGGTTCTTAAAAGCCGATGATGACTCATTTGT
CGTTCTCGAAAATCTACGTTATTTCTTATCAAAGCATAATTCAAGTCAGA
CTCATTATTTTGGGCGACATTTCCGCCCTTTTGGCGGCTACAACTCTGGT
GGGGCGGGCTATGTTTTCAGTAAAGCCACCCTGATAGTATTCAACCAAGT
ACTACGTGATCCAAGTGTTTGCAAACTAAAAGCAGGCGCCGAGGATGCAG
AAGTAGGCGTTTGTTTACGAATGATGGGCGTTGTGCCCGGTGATACTAGA
GACGAATTTGGGCGTGAAAGTTTCCACCCGTTTGCGCCTGATTATCATTT
AGTACCGAATGGTATACCCACTACGAACTGGTTACATAAATATAATAAAC
ATCCGGTCAAATCGGGACCTGGATGTTGTTCAGACCATAGTATAGCTTTT
CATTATATTCCGCCAAACCGGATGTATGTGAtggaatattttatttatca
tttGAGGCCGTTCGGTGTGCACCACGTACACAACTGAGTCGAAAAAACTT
GTGGTTGAAAACACGCGCAGCTTGGAAATATATTTACGAGCACCATTTCT
ACGACGCTGATTGGTTCTTAAAAGCCGATGATGACTCATTTGTCGTTCTC
GAAAATCTACGTTATTTCTTATCAAAGCATAATTCAAGTCAGACTCATTA
TTTTGGGCGACATTTCCGCCCTTTTGGCGGCTACAACTCTGGTGGGGCGG
GCTATGTTTTCAGTAAAGCCACCCTGATAGTATTCAACCAAGTACTACGT
GATCCAAGTGTTTGCAAACTAAAAGCAGGCGCCGAGGATGCAGAAGTAGG
CGTTTGTTTACGAATGATGGGCGTTGTGCCCGGTGATACTAGAGACGAAT
TTGGGCGTGAAAGTTTCCACCCGTTTGCGCCTGATTATCATTTAGTACCG
AATGGTATACCCACTACGAACTGGTTACATAAATATAATAAACATCCGGT
CAAATCGGGACCTGGATGTTGTTCAGACCATAGTATAGCTTTTCATTATA
TTCCGCCAAACCGGATGTATGTGAtggaatattttatttatcatttGAGG
CCGTTCGGTGTGCACCACGTACACAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:404163..407584 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 475-1065:2832 |
| Aaloc | 283-471:1458 |
| Aaloc | 151-279:863 |
| Aaloc | 1-147:1 |
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