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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:428845..437081+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001112 ID=XLOC_001112|Name=XLOC_001112|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8237bp|location=Sequence derived from alignment at sc0000049_pilon:428845..437081+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAAATTTAGTAAGAAATTATCACTTGGAGGATGGAAAGAAACCAT
GCAGAAAACTCAACAAGAATTCTCGACAGGGTAAACTTCACAATTATTAT
TATCGCCTAAAAGTAATTAGAAGTTTTCCTTTTTCCCAAAGTGTGTTTTG
CTTTGTTTCTCAGTGCCCTTTTTATTATGAATGAAtgccctgaaaatttc
aatattcaaaataatgaatttttttacagactTCATAAGGGGGCGGCGTA
CGGGTTTGATGGTGTGACGGTATAAACCCTTTTTTCTGTCAGTGTTTCag
tgtttcggtgtttgaagaaaaaagtgacggtattttggtgacaaaaataa
ggattttaccaaattttgctgtcgatgttgacggtaatccaagaaatatg
cgtcggtatttcggtgtctgctacccccgtacgccccctcTCATAACAGG
CAGGGATTAATCACCTTGCTCTACCCTTACCTCTACAACTTAATGTAATC
ACCTGTATAGTTGCAATTATTATCTAAATTAATTGAAATCCATTTTTATT
ATCTCAGGCTACGAAGTTTTACTGAGAAAGCAAAGAAAGAAGCCAAGATT
GCAAATAAAAAAGCCAGGTTTGCGAAAAACATATTACTCAATGACCCTTT
TGCCTTTATATTTTGCACAAAGCTCTTGCTCTTTCCTCCAAGCAAGCAAG
GCACCCTCAACAATTAAAATTTGACCACTTTCAGAATAGTGAAATAAGCT
TTAATAATAATTcagaattctattgtaatttttgtaacttttttattgCC
AGGAAATTAATGGAAGTTGAAGACGGGGGTGAACTGAGGTATATTTacaa
tgaataaaaatgttgtTGTCTACAactaaataaaaagttattagATTTTA
TGCGAATTTGATATGAACATTAGTAACTTTGAGAATCTACAAAGAGAGTT
TCACTGGACAAAAAGTAAACAATTTGAATGCTAATTTATAGGCTGATAAT
ATCATTagaagattttttagaaaaatgtaaaaaggaGGCAGTGAATGATA
AAAAAGACATTTAAATTCTCTTTTTAGGAATGAATATATTTTATCAGTCA
ATTTGAGTGCTGGCCATGACTTGTTCAAAAAGTAAGTCTTTGAAACCCAA
GAATGGACATCTTGGACTTACTCCACTGTTAAATTAAGtcctaaaatatt
tcaatataccAACATTTGAAATGTTATAGTGCTGTTTATCTGATTTGCAT
AGGTAGCGtttttttATAGGTAGGGGCAGACTGAATAAGAAGTTCGTctg
aggaaaaaaattaaaaatatcactGTGGCTAAATTGTTGTGTTGGTAACC
AACAGGCTCTAAGTTGGTAAGGAGTCGGTGTTTCTCCAAGAAATACATAC
AGTAATAAATCATCTCTTTCAAAATAATGTAATTTATTTTCTACTGTAGA
TTTCAGAATAACTGGGCCACAATGCACGAAGAATCTATAATCAATGTGGA
AAAATGTGATGTGAGTTCTTAAAATTCTGTTGTGTTTTCATTTCAATCAA
TCACAATGTTATTTAGCTCGAAAACTTATTGGGCTGGTTTATGATGCTTT
TATTACAGTGGTTAACATTTCAGAAATCTTAGGTAAATCAGAAATGTTCG
GCTATGATCTCCATAAGCggaaaaaaatttacaactctCCAATCAATTAC
CATAtgagttttttctatttttcagaaagtaGATGCTACAATCAACTCGT
TTTCACGAGACTATTACAAATCTAAAGACTTGTTggaagaatttcaaaac
aaccTTGTTGCTCTGCCTGAGGTCTTGTCTAAAGTTGAAATTGCTCAACG
TCGCATCGGTATGTGTACACTCAAAGAAATCCTATGACATTATCTATCAA
GGTTCTGTGATAACCAATAATTTATTTGTCAGGGTTACAAAAATATAGAG
CACACTCAACAGAagtggaacaataaaatttaaacatggtATTCAATCAG
CTATTTTTCATGTATATGACGAAGCTTTTCATGTTTAGTTAAGTTTcatg
ttttagttaaatttccgccattatggaaacaaaTGTCTGATCCCTTACAC
AAATCGAACATttgtttccataatggtggaagtttttaacaaaacatgaa
tCACCTCTCTATACAATGCATTTGAAATAAATAATCACCAGATACAAGAC
GAAGCATGAAACTGCCATTAGcaggttaaaaatatttcgtcttttgtttt
tttagtcgAAGAGCTTGGAAATATcgtggaaattagaaaaatgtTAACTG
GATTAATCGAGAAATTCAGATGGCTTTTATGATTCGATAAAACTTTTACA
CTTTAGGAAAACTCAAAAATCACGTTTGATTTATTGCAAAATAAGAGCGA
GAGCTATATGAATTAATCTTTTTTGTAGATGGCTACTCTATCTCAGTCTC
TGATTTTCctataaaagatatataattcaattttttctcatcttcgTTCT
TTTAGATTCTATTGCAAAACAAGTGAAACAAATCGAAAGAGCTTTTCTAG
ACTACGAAGATGCGTGTGACAGATTGGaattagaaaaacaaaagaatgaa
tTGAAAATCAAACTCAGTCAATTGGTGGAGACGAAACAGTTAGTACAACG
TCCCTTAATgacataatatttttattttttttatttgtgggCTTGTGTGG
AGGTCCATGTGGTATAATTTGTTATACCACATCCCATTGAATTTCAACAT
AAACCACTGTCATCGATTACTTATTCGGGTCAAATTCCTTGTTCTTGGAA
ATTCTTTGCCGGAGCtttcaaggaaaaaaaattcgatGGATACCCTACAG
AATGATTTCACATTAACATCATAATATTATTTCATCATAACTTCAAAGTT
AATGAAGATCTGACCAGTCTGGTAAGCACTGAAcgtttttaaacaaattt
attcaaaaactaTATCATGCCTATTTTCCAGTGCCGAATACACCCTTAAG
AAGAGTATAGTGGAAGGCAAGAATTCACAGGCCTCTAAACAAGCAGCAGA
CAAAGTGACGTCACCTTCCAGAATCATTGCCGGTCCgaagaaaacgaaag
cgaaagtagaACTAGAAAAGAGGTCCTCTATGGAGAGACAAAAAGCATAC
CAAGATGCATTCATGGAGCAAATGAATCAATACATACAGCATGGTGAAGT
TGAAAGTAAGTTAGGATAAGTTTTAAAGACATATCGAGTGAATATCAATG
GTAAAAATCAGTTCATATAGCTCATATATATATAGAAGAACAGAGTTTGT
GTTTTCTTTGAATATATAATAATTGATTCATATTGAGTCACTTTTATTTg
tgtttaattttactttttggacctaccgggaggtcctttaatttgaccgt
tgtccgttcgtctgttacaagcttttctcgggattggctcattagttttt
ttaaattttttgcacaatgatacaaaatggcaatgcctgaaaagtaacgg
agcccgatttttgaaaaaaaattttggggggcaaatttgggccaaaaact
acctaaaaataaggttttttggactttgtgcaaaattgcttcattagttt
ttcctgatttttggcagaaagatagagtgcaaggtaccctaaaatgtggc
tgaagtaatttttctcagaaaattttttttcgtcgtcaaatacggatttt
cgcaaatttgggccaaaagctacctaaaaataaggttttttggactttgt
gcaaaattgcttcattagtttttcctgatttttggcagaaagatagagta
caaggtaccctaaaatgtggctgaagtaatttttcttggaaaattttttt
tcgtcgtcaaatacggattttcgcttttttggggaaattcccttttacca
ttttcctgttagcagctcttctagggattggctcattagtttttcctgat
ttttggcagaaagatagagtgcaaggcatcctaaaatgtggctgaagtaa
tttttctcggaaaatttcttttcgtcgtcaaatacggattttcgcaaatt
tgggccaaaaactacctaaaaataaggtctttttttggacttggtgcaaa
attgcttcattagtttttcctgatttttggcagaaagatagagtgcaagg
taccttaaaatgtggctgaagtaatttttctcggaaaattttttttcgtc
gtaaaatacaaattttcttttttggggaaaattctgttttaccaagtttt
ggttttaccattttcctgttagcagcttttctcgggctttttattttatt
tttttttcattttttgcacaatgatacaaaatagcaatgcctataagtga
cggagcccgattttgaaaaaaaaatttggggtaaatttgggccaaaaact
acctaaaaataaggttttttggacttggtgcaaaattgcttcattagttt
ttcctgatttttgtcagaaagatagagtgctaggtaccttaaaatgtggc
tgaagtattTTCtaagggaaatttttttttgtcataaaattttcaaaaaa
agacgaccaagttacacaatgataaaagaaaataaatcagacgtttttgc
attgttctaaaacttattgtgtttgctcaataccaatagtaaaatgAAGA
Atacctacttttatctgattttgatcaaggtaggtccattcagcatgttg
cttgttctcaCATTGAGTTGCTTCTTTCCTTTTGGTCGATTTAGATCATG
ATGTGCATTTTTGCTTTTGAGATACTTCCGAAGAATACACCATTGTCCCA
TTTCTGTTTTTCTGCTCCATCAGAATTATGTACAAATAGTTTAGATCTTT
TGTCATCATTTGATATCACATACCTGGTTTccattttatgaatattcaTC
CTGAccatgttgtgttgttgtgtcctcttgttggtattgttttgtttctt
tttgtttattacattttttgaatagttgaaggttcaatacttctttgact
atatatatatagtcaaaGAATTATTGAGCCTTCGactattcaaaaaatgt
aataattGGGGgctgcatttttcaaaaaatactgggggctaACTTGCTAG
GGGGACTGAGTGTTGTGTAAAAGAACTGGGGGCAGAGATGATAGATTACA
TATATTTagattatgttaaaaatctatggtgTGGGGAAGGTTTAACCCTC
TTAACTATGGGTTTTGAATACTTGATGGAGGAGGCCTAGCTGCTAAATGG
ATTTATTTTCCTTGGGTTTCACTTCCTCGACCCATCAAGATCTTCTTTTA
ATCAAGGATAACGCTTGTTTTTTACCCTCAATAAGTGAAGTAGCCTCTCC
CATAGCTTGACCTCATTGTTAGCATAGCTCCTTCACGTGTTCAAACTTTG
CATATTCTTTGATTTTCAGAGCCAATTGCTGGTTCCGCAAACTCACAAAA
TGTGTCCATGGACTTTGAGATTGGCGAATCTGATTTTTCAGCACTTAGCG
AATTCCTTGGACCAGAGGTAAGATTTTATCTTGTCGAAAATAAAGGGTGT
CGTCATTTGCATTGAATCGTCCAGCAtttttttGGGTCTACCTATGGCGT
CCTATAGTTTTAGGACCTCAAAgattttcgtttgttttttcattactttt
gatttgCTGGGTATACCAAAATTTAAACTTGGCTCTtctcgaaaaaataa
ttttatgatgaaacaatttaatttcaaatgaaataacaaagggaactttt
tttaataagagagCCTGGAAGCTAGctgtaattgattttgcttttcatca
aaaaaaaaaaggaaaataaggaattgtgaaaaatacttgataaaccattg
aaaataatatttgaaaataaataaatcaaatttcaaagttcaaattaaaa
ttTCGAGAATGGATAATTTTATACTATGTGTTCACTTGACCATCGATGAA
ATTCTCTATACAAACAATACGCCAAATGTCACAAACCCAAAACAATCTCG
AAATGCAGAAGACACAATTATCTATTTTTCAGCCAGCATTCTTGTGTCTC
TTTTCTCAACATTGGCCAACTTTGGATTGGTTATTGGTTTGACAAAAACT
AACAAGGAATTAACATTGTCTCAGAAACTCTATATTTATTTATCATTAAC
GGACGGTATTGTTGCTCTAATCATGCCTTATTATTCGTCCCTtgagatgt
taaaattttcggATTGTTTGGCGCTTAATATCGGAACAGCTGTATCAATA
TACGCTCAATTAACAAGCTTTGGAACACTCATCACGATCTCATATCTTCG
GAACCTTGCCATTCGAAGACCATTTTACACTGTCCCTCAAAGAAATGTTT
ATTATGCTCTGATTTGCTGGAATTTGTTTGCGGTTTTGGCGGCTGTTAAG
GCGTATCTCACATACACGTTGCCCTATTTGTCACAAATTCATTGGCTTCT
TGCGGGCCTAATAACAGGACTCGTCGTCACTctggctaccattttgaata
tttggTCCAAGAGAATTTTGGGAAAACGGTCACGTGTGTCGTCAACAGAC
ATCGAAGTACAACAACACAAACGTAACAAAGCAGCCGTTAAAATCTTGAA
CGTAATATTGCTAATCTACGCTGTTTGTATTATGCCGTTCAGTATCTATA
TGATTATACTTGGTGTCGTAATGGTCGAGTACAAGGGCAAGGAAGACTTG
TTACGCTTTGTTTACGGTttattttcttacgtgcacctCCCGATTTTCCC
ATGCTCTGGTTTAAACGCTTTGGCATACTCACTGAAAGACAAAAAGatca
agaattattttaaaCGTTTATTACGATGTAgtaaaaaataaagtgaaaat
taagtaaagcatttgaacaaaaactgtgtttaggtaaaataaagCtggtt
ttcatttttgaatttctgattagttcgatttttttcagatttcagcTCAG
CCTTGGCTGGATATATTTGGATTCTCGAATCTTCGAAATCTAGGTTCCTA
TCGggatttgttgttttattttagaaaatttttagtttgaaaattgtgaa
tgtcTCGTTTGAACTTACTAGAAATTTTAGTGGTTGGTAGCACTCCACTT
GATTGCAGGATGTGTGAATTAACGACTCACACTGGTAAATTTTGGTTAAA
GAAGTCCATTCGTATTGATATAATatgttttttatgttcaaattcgTCAT
TTCCTTCTTCTCTTTTATTCGTACGGCGACTCGgatacggcacgccgaac
cgggttctaggccaacttttcaaacttttcaatattGCGTCTTTCCTAAT
CTCTCCTCTTCTAGATTGTGCTTGATCAacactttcttctcttttggtTA
GATGACGGGTGACTTAAGTAGCAGAACATgcttactcatggccacacctg
atgccagacttCGGTCTTCATCTATCCACACTCAATtaatttctcaactt
tttttatgTTGACTTACCGGTTTTCTCTTCGCTCAATTTGTCTAAttgta
agtttgtttgttttttcgttttttagtcGCGTTTTGACGACCATAATACA
CGGGTTTGGAATCAgctctttgtttatttttttttataagtaggatcaaa
aaaatacaagaaaacaaACTCTCTGATTGAGCAGTTTTCAACAAGCATTT
GATCCTCCCCAGGAATCAATTTGTGTCTAGAAGGGTGAATATTTTAAGAT
AAGTGATcaagaaaaaacgaaaaatcttgctttcaatttttgctcatttt
tcaGGAATTAAGTTCGTTCAAGAAGCAGAGtgcaaaacaaaaaccaaaac
acGAGAAAACAACCCCTCAAGTGAATACCAACACCACCACGACGCTAGCC
GAAACAGCTGAAAGCTATTCTGAGATGTCTCCTGAAGATATTTTGAACAG
GGAGCTAGCAAAAGGTCTGGATATTAGTTCAACCTGTGACGgcgtcaaaa
atgaagaaaacaatgAAGGAAATACAGAAGATTCACCAGAAGATTCACCA
GAAGGTTCACCAGAACCACAGCAAAGTAACCAAAAGATTCATCCAGAAAC
TGAAAGTAATAAAGAAGACGCTAGAGAGGAGAAAAGTGATAATTCAGAAA
CTGCAGAATTGATAAACAAAGACAATAGTGTGGAGGATCAAGATGAAGTT
GGTAATACTGATGGTGGTGGACCAGTTGTTGCTGAGGATATTGCACCTGG
TGGCAGTGATGATGAGTTTTATGATGCAGATCCTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:428845..437081+ >XLOC_001112 ID=XLOC_001112|Name=XLOC_001112|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2724bp|location=Sequence derived from alignment at sc0000049_pilon:428845..437081+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAAATTTAGTAAGAAATTATCACTTGGAGGATGGAAAGAAACCAT
GCAGAAAACTCAACAAGAATTCTCGACAGGATGGATAAATTTAGTAAGAA
ATTATCACTTGGAGGATGGAAAGAAACCATGCAGAAAACTCAACAAGAAT
TCTCGACAGGGCTACGAAGTTTTACTGAGAAAGCAAAGAAAGAAGCCAAG
ATTGCAAATAAAAAAGCCAGGCTACGAAGTTTTACTGAGAAAGCAAAGAA
AGAAGCCAAGATTGCAAATAAAAAAGCCAGGAAATTAATGGAAGTTGAAG
ACGGGGGTGAACTGAGGAAATTAATGGAAGTTGAAGACGGGGGTGAACTG
AGGAATGAATATATTTTATCAGTCAATTTGAGTGCTGGCCATGACTTGTT
CAAAAAGAATGAATATATTTTATCAGTCAATTTGAGTGCTGGCCATGACT
TGTTCAAAAAATTTCAGAATAACTGGGCCACAATGCACGAAGAATCTATA
ATCAATGTGGAAAAATGTGATATTTCAGAATAACTGGGCCACAATGCACG
AAGAATCTATAATCAATGTGGAAAAATGTGATaaagtaGATGCTACAATC
AACTCGTTTTCACGAGACTATTACAAATCTAAAGACTTGTTggaagaatt
tcaaaacaaccTTGTTGCTCTGCCTGAGGTCTTGTCTAAAGTTGAAATTG
CTCAACGTCGCATCGaaagtaGATGCTACAATCAACTCGTTTTCACGAGA
CTATTACAAATCTAAAGACTTGTTggaagaatttcaaaacaaccTTGTTG
CTCTGCCTGAGGTCTTGTCTAAAGTTGAAATTGCTCAACGTCGCATCGAT
TCTATTGCAAAACAAGTGAAACAAATCGAAAGAGCTTTTCTAGACTACGA
AGATGCGTGTGACAGATTGGaattagaaaaacaaaagaatgaatTGAAAA
TCAAACTCAGTCAATTGGTGGAGACGAAACAATTCTATTGCAAAACAAGT
GAAACAAATCGAAAGAGCTTTTCTAGACTACGAAGATGCGTGTGACAGAT
TGGaattagaaaaacaaaagaatgaatTGAAAATCAAACTCAGTCAATTG
GTGGAGACGAAACATGCCGAATACACCCTTAAGAAGAGTATAGTGGAAGG
CAAGAATTCACAGGCCTCTAAACAAGCAGCAGACAAAGTGACGTCACCTT
CCAGAATCATTGCCGGTCCgaagaaaacgaaagcgaaagtagaACTAGAA
AAGAGGTCCTCTATGGAGAGACAAAAAGCATACCAAGATGCATTCATGGA
GCAAATGAATCAATACATACAGCATGGTGAAGTTGAAATGCCGAATACAC
CCTTAAGAAGAGTATAGTGGAAGGCAAGAATTCACAGGCCTCTAAACAAG
CAGCAGACAAAGTGACGTCACCTTCCAGAATCATTGCCGGTCCgaagaaa
acgaaagcgaaagtagaACTAGAAAAGAGGTCCTCTATGGAGAGACAAAA
AGCATACCAAGATGCATTCATGGAGCAAATGAATCAATACATACAGCATG
GTGAAGTTGAAAAGCCAATTGCTGGTTCCGCAAACTCACAAAATGTGTCC
ATGGACTTTGAGATTGGCGAATCTGATTTTTCAGCACTTAGCGAATTCCT
TGGACCAGAGAGCCAATTGCTGGTTCCGCAAACTCACAAAATGTGTCCAT
GGACTTTGAGATTGGCGAATCTGATTTTTCAGCACTTAGCGAATTCCTTG
GACCAGAGGAATTAAGTTCGTTCAAGAAGCAGAGtgcaaaacaaaaacca
aaacacGAGAAAACAACCCCTCAAGTGAATACCAACACCACCACGACGCT
AGCCGAAACAGCTGAAAGCTATTCTGAGATGTCTCCTGAAGATATTTTGA
ACAGGGAGCTAGCAAAAGGTCTGGATATTAGTTCAACCTGTGACGgcgtc
aaaaatgaagaaaacaatgAAGGAAATACAGAAGATTCACCAGAAGATTC
ACCAGAAGGTTCACCAGAACCACAGCAAAGTAACCAAAAGATTCATCCAG
AAACTGAAAGTAATAAAGAAGACGCTAGAGAGGAGAAAAGTGATAATTCA
GAAACTGCAGAATTGATAAACAAAGACAATAGTGTGGAGGATCAAGATGA
AGTTGGTAATACTGATGGTGGTGGACCAGTTGTTGCTGAGGATATTGCAC
CTGGTGGCAGTGATGATGAGTTTTATGATGCAGATCCTTAAGAATTAAGT
TCGTTCAAGAAGCAGAGtgcaaaacaaaaaccaaaacacGAGAAAACAAC
CCCTCAAGTGAATACCAACACCACCACGACGCTAGCCGAAACAGCTGAAA
GCTATTCTGAGATGTCTCCTGAAGATATTTTGAACAGGGAGCTAGCAAAA
GGTCTGGATATTAGTTCAACCTGTGACGgcgtcaaaaatgaagaaaacaa
tgAAGGAAATACAGAAGATTCACCAGAAGATTCACCAGAAGGTTCACCAG
AACCACAGCAAAGTAACCAAAAGATTCATCCAGAAACTGAAAGTAATAAA
GAAGACGCTAGAGAGGAGAAAAGTGATAATTCAGAAACTGCAGAATTGAT
AAACAAAGACAATAGTGTGGAGGATCAAGATGAAGTTGGTAATACTGATG
GTGGTGGACCAGTTGTTGCTGAGGATATTGCACCTGGTGGCAGTGATGAT
GAGTTTTATGATGCAGATCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:428845..437081 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 880-1362:7755 |
| Aaloc | 784-879:5422 |
| Aaloc | 559-780:2983 |
| Aaloc | 427-555:2508 |
| Aaloc | 292-423:1726 |
| Aaloc | 232-291:1451 |
| Aaloc | 178-228:1079 |
| Aaloc | 142-174:804 |
| Aaloc | 82-138:559 |
| Aaloc | 1-78:1 |
|
