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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:629771..632303+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001102 ID=XLOC_001102|Name=XLOC_001102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2533bp|location=Sequence derived from alignment at sc0000049_pilon:629771..632303+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTAAATTACCTGTTTTTGTCACTTCTTTTCGTGGTAACACGAAG
CGCTCTTGGGAGCTGGCATAAATATACTCATCATGGCTCAGGTAACTTGG
TAAGCGGTGTAGCTGTTATGCAATCACGAAATACCAAACTGTTTGTTGTA
GGAAGACATGGTCATTTATGGGAAAGGGTTTATACCAGTTCTTGGAAATG
GGTGGATCATGGCGTACCGCCCTTTCTCACTGGGTTCGACAGATTGAAAT
CTATGCCATGCGTTCTAATGGATGGAAAATTGTTCATTGTCACAAACGAT
GGTAAGAGACTTTAAGTCCCAGCAGTGTTGTAATTTGCTCCGGGTATCTC
AATACccttttgtttatcaaagattttgctttttaGCATGCCTTCATCCA
GTTGGGTTGGCTCACAATTACAGCAAAGACTCAGCTCAAGATCATTTTCA
GAGATCATTCCTTTCCCAAATGTGTTATTGACAAGTATAGTTTTATTCAC
GGGATAGTAAGATATAACtacccccttctcgcagacccggtaggattctt
tcagccagtggggataaaaataacggataaaaacttgatggggattgata
ttccaatattttttatgactgaGGATTTCAATTCCTTTGtcttcaagtca
gaaaattcagtaggaatgggaaaaatagcacaatattttgcagtgaggat
tggttttttggttattttcggTGGGTTCAAAAAttagaggataattttcc
accgggacgatattttggccaaattttccagtgggtctgtgagaaggggt
tgttgAATAAGATTATGATATATAGGAGTATACGTTATGAAGAGCTATCC
CCTTCATTTAGGAATTTTGGTCGAGCATGTTTATGGCACGGACGGTAGAT
GGCATTGGGTTGACCACGGAAAACCAACAGATGAAAATGGCCGTATCTTA
GCAACCCTTGATGCAACCAAATGCGTAGCGTCCCAGGGTAACAATAGACA
TCGAGTGTTTGTACTTGGCAGAGATAATCGTCTTTATCAACGATGGTGGG
TTAATGGTGCATGGAATTGGAGAAGCCattacttttcttttcatcGACAG
GTAAGATTCAAAGGATTTCCTTTTCATTAGATTTGCTCCCGtcagggggg
ggtactaggtttgcaaggtgACGGATATGTCCgggccaaaaatcgaaaat
cgatccTTAGAGTGGGAAAAAGTGGCGtttttttttACCCTTGGAGAgac
ttttcttaaaatattttgtagattttcgctcgatttttgtccaaattttt
taaaatcacgaccctttgagaaaggaaattttgatttgtgtgaattttgg
acccttacGGAGATTCaatcaatttgttttttaatattttatgtacccct
ttgagagactttcaagGTCGTGAAAAAAGGACCCTTATGGCttgcacata
cccagcacctaagTACTCCCCTCAGGATTTGCTGTTTTGTTGAAGTCGTT
TATAATCCATGTAATACAGCAATATTGGTGTTATGTAATTATACAATCAT
CGTGACGGgatagtttgtttttttgcgtTGCAATAATCACTTCGTTTGCT
GGATTAATCGTCTGTCATGCTAGACGAGCAGTTTATGAAtgaataccggg
tgacccagaAAAAACGTTACTGCATTGATTTATGCGCTTACAAATTGACG
TCTTTCCATACAGACtttctaaaatttcagacaAAGAAGCTTAACAGCAT
TTTGCTTAGTTTGCAAAAACTTCAGGAGGATATCTCTACTGGATAttttt
ttGCGCACAAAATTCTATTAAAAGGAATTTTGATAGAGTATTTTCTGCTG
ATAGCACATCATAATCTAAGGTTTTGCTGTAgtcttttcattgttttcac
ggggtacACGACCAGCTTTCAGAACTTTAAAGGTTTGGACATTCTAACCC
TTTCAAAACTTTAATTTAGATCTGGCCAGGTGGTTTCGATGTAGGATTTA
CGGGTACACATGTTTACGCTGTTGGAACCAATGGAGAACTTTATCGTTTC
GAGATGAGCCCTAATGGTAACCAAAAATTTGACTGGGATCATTCTCTTGG
TAAACCAGACCACGGATCAACCATTATTCGAAGTTTGTCTGTTAACACCA
TCAATGGTGCAACTAGAGTCTTAGTTGTATCTGCCACTAATCATATTCAC
GAATGGAGGGGCACTGGCGGTAATCCGAATAGCTTTTCATCCGGTACTCA
GCCGGCTGGGGTCAGTTCCTATGGTCCGCAGATGATTCTTTCCAAAGAGT
TTCAGCACACTTGTGGAAGAGGAAATACACCTACGAATATGGTAATGATT
AAAACACCGCATACAATCTACGCCATGACCATTCCGAATTTTGGTGGATT
TGATCCTCCTGTGGCTATTGGTACTAATAGCAATTCATTTATTGATGCGA
TGCCAGCCGTTTTGCAGAATCCGAGATGTCCTAAAGTATTCCTTGTAACA
AGCAATAAAAAATTAGTGGAATTTTACGTTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:629771..632303+ >XLOC_001102 ID=XLOC_001102|Name=XLOC_001102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000049_pilon:629771..632303+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTAAATTACCTGTTTTTGTCACTTCTTTTCGTGGTAACACGAAG
CGCTCTTGGGAGCTGGCATAAATATACTCATCATGGCTCAGGTAACTTGG
TAAGCGGTGTAGCTGTTATGCAATCACGAAATACCAAACTGTTTGTTGTA
GGAAGACATGGTCATTTATGGGAAAGGGTTTATACCAGTTCTTGGAAATG
GGTGGATCATGGCGTACCGCCCTTTCTCACTGGGTTCGACAGATTGAAAT
CTATGCCATGCGTTCTAATGGATGGAAAATTGTTCATTGTCACAAACGAT
GATGAAAGTAAATTACCTGTTTTTGTCACTTCTTTTCGTGGTAACACGAA
GCGCTCTTGGGAGCTGGCATAAATATACTCATCATGGCTCAGGTAACTTG
GTAAGCGGTGTAGCTGTTATGCAATCACGAAATACCAAACTGTTTGTTGT
AGGAAGACATGGTCATTTATGGGAAAGGGTTTATACCAGTTCTTGGAAAT
GGGTGGATCATGGCGTACCGCCCTTTCTCACTGGGTTCGACAGATTGAAA
TCTATGCCATGCGTTCTAATGGATGGAAAATTGTTCATTGTCACAAACGA
TGGAATTTTGGTCGAGCATGTTTATGGCACGGACGGTAGATGGCATTGGG
TTGACCACGGAAAACCAACAGATGAAAATGGCCGTATCTTAGCAACCCTT
GATGCAACCAAATGCGTAGCGTCCCAGGGTAACAATAGACATCGAGTGTT
TGTACTTGGCAGAGATAATCGTCTTTATCAACGATGGTGGGTTAATGGTG
CATGGAATTGGAGAAGCCattacttttcttttcatcGACAGGAATTTTGG
TCGAGCATGTTTATGGCACGGACGGTAGATGGCATTGGGTTGACCACGGA
AAACCAACAGATGAAAATGGCCGTATCTTAGCAACCCTTGATGCAACCAA
ATGCGTAGCGTCCCAGGGTAACAATAGACATCGAGTGTTTGTACTTGGCA
GAGATAATCGTCTTTATCAACGATGGTGGGTTAATGGTGCATGGAATTGG
AGAAGCCattacttttcttttcatcGACAGATCTGGCCAGGTGGTTTCGA
TGTAGGATTTACGGGTACACATGTTTACGCTGTTGGAACCAATGGAGAAC
TTTATCGTTTCGAGATGAGCCCTAATGGTAACCAAAAATTTGACTGGGAT
CATTCTCTTGGTAAACCAGACCACGGATCAACCATTATTCGAAGTTTGTC
TGTTAACACCATCAATGGTGCAACTAGAGTCTTAGTTGTATCTGCCACTA
ATCATATTCACGAATGGAGGGGCACTGGCGGTAATCCGAATAGCTTTTCA
TCCGGTACTCAGCCGGCTGGGGTCAGTTCCTATGGTCCGCAGATGATTCT
TTCCAAAGAGTTTCAGCACACTTGTGGAAGAGGAAATACACCTACGAATA
TGGTAATGATTAAAACACCGCATACAATCTACGCCATGACCATTCCGAAT
TTTGGTGGATTTGATCCTCCTGTGGCTATTGGTACTAATAGCAATTCATT
TATTGATGCGATGCCAGCCGTTTTGCAGAATCCGAGATGTCCTAAAGTAT
TCCTTGTAACAAGCAATAAAAAATTAGTGGAATTTTACGTTTAAATCTGG
CCAGGTGGTTTCGATGTAGGATTTACGGGTACACATGTTTACGCTGTTGG
AACCAATGGAGAACTTTATCGTTTCGAGATGAGCCCTAATGGTAACCAAA
AATTTGACTGGGATCATTCTCTTGGTAAACCAGACCACGGATCAACCATT
ATTCGAAGTTTGTCTGTTAACACCATCAATGGTGCAACTAGAGTCTTAGT
TGTATCTGCCACTAATCATATTCACGAATGGAGGGGCACTGGCGGTAATC
CGAATAGCTTTTCATCCGGTACTCAGCCGGCTGGGGTCAGTTCCTATGGT
CCGCAGATGATTCTTTCCAAAGAGTTTCAGCACACTTGTGGAAGAGGAAA
TACACCTACGAATATGGTAATGATTAAAACACCGCATACAATCTACGCCA
TGACCATTCCGAATTTTGGTGGATTTGATCCTCCTGTGGCTATTGGTACT
AATAGCAATTCATTTATTGATGCGATGCCAGCCGTTTTGCAGAATCCGAG
ATGTCCTAAAGTATTCCTTGTAACAAGCAATAAAAAATTAGTGGAATTTT
ACGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:629771..632303 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 541-1104:1970 |
| Aaloc | 304-540:864 |
| Aaloc | 1-300:1 |
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