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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:720073..724250- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001073 ID=XLOC_001073|Name=XLOC_001073|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4178bp|location=Sequence derived from alignment at sc0000049_pilon:720073..724250- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTGTTGAAGGTTATGACGTGGAAACAGTGCAAGATATTTCATC
CGATTTATTTTGTGTCATTTGTTTGAAATTGATGAGAAATCCTGTTCAAT
TCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACAC
CGCTCTAAACAAAAGTAAGTCATATTCATGATATTCATGACATAATCTTT
AATACGGAAGCATCTTAAATGACCCGGGCGTTATGAATACAGTGGAGTCC
ATAACTCGAACACGCACGAGGAAATTTTGGAGTTACGGACATTTCGAGTT
ACGGAGTAAGGTACATAAGGGACCATTAAACGAGTTAAGGTGACATTCGA
GTGGTAGAGGTTCGAGATAAAGAGACACCACTGTATCACTATAGACATGG
AAACTTCAGCTATTATTGGATGGCTTATGTTTAAGTATTGGAAACTGAAG
AGATTTAACTCCAAAAGCTTGACAATTACTTGACAAAAGTTATACCTCTA
TACTATCCTCTATCTATTATAAGTATAACGTTAAGCACAAAAGTTTTTTT
AGATGTTAGTAGTTTGCCAAACATTCATTTGAGTCATCTGGTACACGTTT
GTTTTTTATAAGAACATCCAATTTTTTTGCCTCTTAATTTTTTGAGTTTT
AAGCCTAAAAATGTTGTTAACGTTCTTAATGTCACTATTTTTTGAGTATT
TTGGTCCATTTTCCTAATAAATTTCATTCAATATTCACAGAGCCACAACA
CAATGTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGGTTTGTTTGTA
CTGAAGCTCCATTATTGAGCTATTTCATAAAAAAGAATTTTCCCCAACCT
CTCTGTTCAGAGTGTCCTTAAAACCTGGGACAATTTTGGAGAGTTGAAAT
TTGAAAATTTCGTGAAAAGCGAGCTCTTGAAACGTAGAACTTGCTCGAGT
GGTTTGATCTTCTAAATGTGGCCTTCTCAACGCGGGGATAATTATTCTTT
TTCTGGAATAACTAATTCAATTTTTAATGGCTCATTTTCACTTTTAGTTC
AAATTTGAAAATAATTCGAAAAAACATTATCTCATTTTATAGTTGCAAAT
GGAGGCAATTAGATTAGACTTCCCTTTTTTCAAACTGCTTTTAGAATTTG
TTATTAGAATTCATTTCAATTTCAAAACAATCTTACTGTACTGAGGATGG
TTCTCTGTTAAGGACCGAAACATCTATGTAATAAATTAATAAAATTGAAC
GATAAGAAGCTTCTGTTCTATTAACGAACTTTATGATTAAGGAATATGAA
AGGGTTAACCTGCTTAATCGAGAATAGTTTGAATTATAGAAACTTTCCAT
GGCTGAAAGATTCCAATGAATTAGGTCTCTTATTAGAGGTAGTTTGACTT
TTGAAGATGTCCCATACGATCATAGCGGTTGAGAATCAAGACGGGAAAGC
CTAATTAGAACCTAATTCAATGGAATCTTTCAGCCTGGAAAGTCTCTATA
ATTCAAATTATTCTCGATTAGTACTAGTAATCGTCAGTAAATAATCATTA
GTAACATAGTTTTTGTAGAAAAAGGGAAAGTGTCACCCCCGCCGAAGAGT
GCAAAAAGTGTTAATAGTGCAATTAACGATTAATCGCACTCCTCTAAACC
AATCAGATTCGAGTAATTTTGCACGGCTGACGATTAAACATATTAAAAGA
TGTTCTCTTCTAAATTTTAGATTGTATCAAACGTGATGTTGCACCGCATC
ATACTTTCATTGCATGTGCTATGTGGTAACCATGACAACGGATGTAAATG
GACCGGTGAATTGGATCGATTTGATGTAACATTACTGTTTGTTTTTATTA
TTACATTGTAACAGTGGAACTAGCCGGTGGAACTTTTTTCCTCAGTGGGA
ATAAAAACTCCTATTGAAATCCCAACGGGGATCGAAATTCTATTGTTCCA
AGGCTCAAAATTCAGTGGGGATGGTTTTAAAGTGCAATTCTTAAACATTG
AATTTCCGATGGGGATGAAATTTCAAAGTATTTTCCCACCGGGAACGAAA
TTTTCGCCAAATTTTCCAGTGGGGCTGGGGTCCCAGTGGGTGTGTGACAC
AGGGGTGTATTATCGACCGCCGGAGGCGGTTTCTTTCATAGTGGTACGCT
AATCTCTTTTTGCCTTGGCTCATTACTTTGTCTTCCATTTACTTTCGGTT
TTTTTAACTAGATTACCCAGGTGTTTCTCTTTTTTTTCCCTGAATGTCTT
TTATTCGGAATTGAATAATCGAGACATGAAAAATGACTATATTGTAATCT
GTTTTCAATGAATAATCTGAAATGTACTGGAGATGACATGTAGGCGTTAA
TAATGTGCGTGCGCTCTTTCGCGAGCGTGATGCGTGATTATCTGGCACCC
AGATGGTGAAATTTTCATCCGACACACTAAAGCTCTGAAGGTCGGGAAAA
TTTTCAACATCTGGAAGGTTTACATTACGGAATTTTGCAAGACCGGGTCA
AGGATTTTGCAGCGGGAGGTCTGGTAACCCAGCCCTCGTTTTTGGGGATT
GGCGGGTCCAACCGAAATATTTTTAGCTTTACATGCAAGGGCTGTTGAAC
CCGACTGAGGATGCGTCACATCAAAGGCCGACTATCATTCCTCTCCGATG
GGAAATTGGCCCGCTCCCTTTAGAGCTTTAGCGTGGGCGGCCGCCAATCC
GCCATCGGAATATCAGATAAAATGCGTGATGGAAGCCGGTCGTTTCAGTG
TGGTTTAGATCCACACTGTGACCTAGTAATAATGACCAATAAACAAGGAT
TTCAAATTCAATATCTGCCAACCAAAATTTCGTAAGTTTGGTAATTGCTG
ACCCTTGGACCATATAGTACATCGAACTGTGTGGATATCTTTTCCTATCG
ACTTGGTATAAAGAGTTGATTCCCTTTGCATAGCCTGACATAATGCAATG
TTCAAAGTTCTCTCGCCTCAAAGAAGTTAAAAAAAAGAGTAATTTTCGTC
TCAAAACACTATCAAAATAAGCGAAATTTAAAGAATCTCGCCTAACTTTT
TTTGTTGTAAAACTACATGTCTGTCCAACACGAGAATCGCTGCTTTAACC
ACTGAAAATGACGTACCTAGACACATCAAACAGGAAACACCTTTGGGTAG
CTATCAGGAAGGAATCTACTGATCGAGTTCGTGTATTTTCTTTTTGTTTT
TTACTGCTCACAGGAACATTTCGCGCAATGTACGAAACATTCAGAAAATG
CAGCAAACAAAAAGTCCAAAAAGAAAAAGGTTTGTTAATTCGAAGAAACG
TTTCCTCTAAGAGACGACCAGTTTTAAAGGGAAGAATCCTAATTCCACTT
TTGCTTTTAACTTTCTTTTTGCACCCAGTGTCACAAATTACATAAAATAA
GTAATGAATATTTTTTAGAATGTATTTCATTTGAATATTTAAAGCTTCAT
ATTATACCCTTGCTCTTTTGTCGGCTTAAACATAAACTCTATTACTTATT
TTAAGATTTTTGTTGTTCATTCAGAAAAGAGCAGATCAAAATCAACAAGC
ACCACAAAACATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCT
CAAACCTTAAAGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGAC
TCGGACCCAAACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAG
ATTTAACAATAAAAGTGTCACGTCTAGCTGCAAAACTAAAACATTAGCCT
TGATCCTTTTCACTATATCCTTATTGTCTGGAATGCATCTACTGGGCGGA
GGCTTCTCTGATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCC
TGGAATCGATCACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAA
AAATGAATTCCCTAATATACGCACAGCAAAACAATTTTTTTCAACTCCAT
CTCGGCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGAC
ACTCAGGCTAACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATT
TCACTAAGACCTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAG
ATGATGCACCGTAAATTAGGACTGGAACGAACAGCCGGTTTCCAATTGGT
CAACATGAAGGAAGATGCTTACGCAAGG Coding sequence (CDS) from alignment at sc0000049_pilon:720073..724250- >XLOC_001073 ID=XLOC_001073|Name=XLOC_001073|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2076bp|location=Sequence derived from alignment at sc0000049_pilon:720073..724250- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTGTTGAAGGTTATGACGTGGAAACAGTGCAAGATATTTCATC
CGATTTATTTTGTGTCATTTGTTTGAAATTGATGAGAAATCCTGTTCAAT
TCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACAC
CGCTCTAAACAAAAATGGCATTTGTTGAAGGTTATGACGTGGAAACAGTG
CAAGATATTTCATCCGATTTATTTTGTGTCATTTGTTTGAAATTGATGAG
AAATCCTGTTCAATTCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTCA
AAAGCTTGCTACACCGCTCTAAACAAAAAGCCACAACACAATGTCCACAA
TGTCGTGAAGTTGTCAAAGAAGGACAGAGCCACAACACAATGTCCACAAT
GTCGTGAAGTTGTCAAAGAAGGACAGATTGTATCAAACGTGATGTTGCAC
CGCATCATACTTTCATTGCATGTGCTATGTGGTAACCATGACAACGGATG
TAAATGGACCGGTGAATTGGATCGATTTGATATTGTATCAAACGTGATGT
TGCACCGCATCATACTTTCATTGCATGTGCTATGTGGTAACCATGACAAC
GGATGTAAATGGACCGGTGAATTGGATCGATTTGATGAACATTTCGCGCA
ATGTACGAAACATTCAGAAAATGCAGCAAACAAAAAGTCCAAAAAGAAAA
AGGAACATTTCGCGCAATGTACGAAACATTCAGAAAATGCAGCAAACAAA
AAGTCCAAAAAGAAAAAGAAAAGAGCAGATCAAAATCAACAAGCACCACA
AAACATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAACC
TTAAAGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTCGGAC
CCAAACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGATTTAA
CAATAAAAGTGTCACGTCTAGCTGCAAAACTAAAACATTAGCCTTGATCC
TTTTCACTATATCCTTATTGTCTGGAATGCATCTACTGGGCGGAGGCTTC
TCTGATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTGGAAT
CGATCACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAAATGA
ATTCCCTAATATACGCACAGCAAAACAATTTTTTTCAACTCCATCTCGGC
TCCAAGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACACTCAG
GCTAACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTCACTA
AGACCTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGATGATG
CACCGTAAATTAGGACTGGAACGAACAGCCGGTTTCCAATTGGTCAACAT
GAAGGAAGATGCTTACGCAAGGAAAAGAGCAGATCAAAATCAACAAGCAC
CACAAAACATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCA
AACCTTAAAGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTC
GGACCCAAACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGAT
TTAACAATAAAAGTGTCACGTCTAGCTGCAAAACTAAAACATTAGCCTTG
ATCCTTTTCACTATATCCTTATTGTCTGGAATGCATCTACTGGGCGGAGG
CTTCTCTGATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTG
GAATCGATCACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAA
ATGAATTCCCTAATATACGCACAGCAAAACAATTTTTTTCAACTCCATCT
CGGCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACAC
TCAGGCTAACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTC
ACTAAGACCTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGAT
GATGCACCGTAAATTAGGACTGGAACGAACAGCCGGTTTCCAATTGGTCA
ACATGAAGGAAGATGCTTACGCAAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:720073..724250 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 385-1038:655 |
| Aaloc | 319-384:966 |
| Aaloc | 214-318:2459 |
| Aaloc | 166-213:3438 |
| Aaloc | 1-162:4179 |
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