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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000668_pilon:39971..44175+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000961 ID=XLOC_000961|Name=XLOC_000961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4205bp|location=Sequence derived from alignment at sc0000668_pilon:39971..44175+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGACTCTAACCAAGGAAGGAATCTCTACCAAGCGCTACAAGATATGAT
TGATGAACGTGTGGCTGAAAAAATGGATCCTAAACATGAATGTAAATTCG
GAGGTCTATGTAACAACGTTTACAGCTATGGATGTCATAAGTATGTGAAG
AAATGTGATGGTTCAGGATGCACAGAAATCGTAAGTAAAATTATAAAAGC
ATTTTGGTTGTGCAGCCCTTTGTAAATGTATTTTGACTACTTGATTGACG
ATCACTTTTGTATTGTTAGTGGCAGAAACTACCCAATAACATCCTATGTA
ATTTACGTTAACTGTGCCTGAAAATATAATCTAGTTTTTCCAAGCACACT
TTTCCCCGGGATTTGAGTTTAATTTCTCATATTAATTTTCGCCCATCATT
TTGCAAGATCCCATAGAAGAAAAGCGAAAGCAATACACTTATTATGAGGC
TCAAACTGCAGTTTTCCTCATGATGTCTTAAGAAACATTTTGTGAGTGGC
AATAACGGTTTAAACGATGTAGAAGCTACAACTTGATATTTTGCCAAAAG
TACTGTAAAGTACTTGCATACATTAAGGTAAATATTATGTCGCGATATTT
AAGCATTTATATAATTCCCGTATACTTTCTGTAACTTTAGGGAACTTGCT
GGCGTCAATGTTACTCAAACACGAAGACATGGTGTAGATTAGCAGACACA
TCCAGACGTGACCAATTCTTTACTTGTCAAAAAGATTCAGATTGTGCACA
CACCAGAGAACGAGGATTGTTAGGAAAACCTGCTAAGGAAGTTTGCGAaa
tgaatttttctctttttagctcTGGGCCAATATGTCATGGATCAAATCCT
TAAATGTTTAAAGTACTTTaaagaggaagaaaatttgACTTTGTCGATGG
TTATGAACAGGATGAAATAAGCTTCTCCCGAAATTATACCTTGATTTCAA
TTCAACTTACACaataattttgtacattttctattatgttttatttaaag
tgttttttgtaatttttggaaaataactttttgaaatattattaattttt
gcaaGTATGGTTATTAGTTCAAGAAAATATAATTGTTGTGGGATATACTC
ATTTTTTGCTGTTGGTGCATGGGTTTTCCAccctttatttattttgtaaa
cTATAGCCCTAGGATATGCTTTGGTACTGTTTAATATTTGGTAAGATTTG
AGCCTCTGGATATGCTAGATCGACTCTTTTACATGGATGGCCCactaatc
taggacttttagacagtctctcgattgttttcacggagTCCACGACTAGC
CGGCTCggttatctatgaactgaaaGGAATATCGGAAGGCGCAGGGATTC
GAACTGCGAAGCCCTAGgttgagacgctgacgcctttgacgaCTTGGCCA
TCGCTGTGCTTATTTTAAGCTCATTAAAAGAACATGTAATCAATTAATAA
TCGTCTGTTCTACGATggagaaaaataactcgagaTCGTTTACATTTTTG
GCTATTGCGGGTGTGCACTTACGTTTGTACTTACattctcggtcaaaata
tattttttagttttcaaaaatttattcgaatattttaatttggcaaggag
ggtttttaAACTTCCatgctatattctgagccttgtactattttgaactt
ttggatcatgACATCCCaagctcctaagtcttaagtctagcgttaaaact
cagagttaaaactttaccttcgaacctacttttgACCACTtaaaaatcga
ttgtggtttcaaaacttcccgatgaatttcccttttttcctcaaatattA
TGATCTTGATTGCAGAACACCACCATTTTTGATACAATGTACAAACTTTT
GTCCACAACCAGATTTTTCGTACCAACCTTTTAGTACAATGTACCAACTC
AAATTTAGCTACGCAATTATAGAAAGAATATTTGAGATAGAGTGGATCTT
CCTGAGAAATtataaacaccacaaatgatatTTAGGCGCCTTAAAcaaca
gttggaaagtagagttttaactctgagttttaacatgagactcaagactt
aggaccttaggatctcagggttcaaaagctcaaatttgctcgaataaggc
ttAGAAACCacaatcgaaatattcaatgaaagaaattggAAGTGCTAAAG
CAGCAATTTTcgtccgaactttaaattcttaaaaaaacgttaaaatacac
ttaaaatctcaaaatatttcgaCCGTGATTGTAGAGGCCTTAtttttttA
CATCAACAAGAAATTTTTAcgttataaaaaaaactaaaagttaGAAGAAC
AatacaaggcttcaaaaatttcggatgttcttatataaaaaaacacgcGT
ACactcctttttataatagaaccttaaaatttttaatgaggTCTTGTCCA
CATTTATTTACGATTTCATcatataaaattattcttatgaaaaaggaTGT
ATTATTGATTGTCattacaatcaaagtcataatatgtgagcgaaaaagaa
aattccaaCGAAaccttacaaccacaaacgatttagAGGAACTCTAAATT
AGAGCCTTTTCATAAACTATTATAAACGCAACAACTGCCTCGTTCTGAAA
CCATTGCCAAAgtgatcatatcccttgagactTTAAGTGTTACTTTTTGA
ATAGAGTGAACTTCTTATaaactcctctgggaatcaattaccataagaat
attttaaaaatgaggtaagcgttgctcctgatgtaatttatgaaaaggtc
tattgggagACAGAAACGCttttttttGTACCACGCTGAGATGCTGTGGC
GGAGATTtgtctgagaaaaaaaaggtcATCATATGCATCTTGGGATTTGA
GCATTATGTTACATTAATATTTAATTTAGTATATTGGTGAAAAAGTTGTT
ACGGTAATTATGATGGGAATTATCAAACGTGATACATTTTATTCCGAGCA
CCTCATTggatgaattttaaaataaatgaatCCCAAATAGCTCTCATTAT
AAAGCCTCAGTATAAAAGGAGATCAAAGTAGTacatgaaaatcaaaccaa
aagcAAATTTAAAGCGAAGTACAGTGCAATAGTGAAATTGCCGACAACAG
AAAGTAAGTACAAATTTAATTGATCAGCTCTTTGAAACTACTGAATGCGA
ATAAGTTTTACCACTACACTTTTTCAATAACTCGCTAAACAACTAAAACT
CTGAATCTGAGTGACTAGATTGAAGCAAATTTTATAGTTGAGCAAAATAA
ACAGAAACTTTATTCTTCACTTTTCTTCAGGCAATGGGCATCAAAATACT
CATTTTATTCACCGCGGTTTTGGCAATTGCTTATTCCTATCGCATAAGCA
ATGACGACTCTAACCAAGAAAGGAATCTCTACCAAGCGCTACAAGATATG
ATTGATGAACGTGTGGCTGAAAAAATGGATCCTAAACATGAATGTAAATT
CGGAGGTCTATGTAACAACGTTTACAGCTATGGATGTCATAAGTATGTGA
AGAAATGTGATGGTTCAGGATGCACAGAAATCGTAAGTAAAATTATAAAA
GCATTTTGGTTGTGCAGCCCTTTGTAAATGTATTTTGACTACTTGATTGA
CGATCACTTTTGTATTGTTAGTGGCAGAAACTACCCAATAACATCCTATG
TAATTTACGTTAACTGTGCCTGAAAATATAATCTAGTTTTTCCAAGCACA
CTTTTCCCCGGGATTTGAGTTTAATTTCTCATATTAATTTTCGCCCATCA
TTTTGCAAGATCCCATAGAAGAAAAGCGAAAGCAATACACTTATTATGAG
GCTCAAACTGCAGTTTTCCTCATGATGTCTTAAGAAACATTTTGTGAGTG
GCAATAACGGTTTAAACGATGTAGAAGCTACAACTTGATATTTTGCCAAA
AGTACTGTAAAGTACTTGCATACATTAAGGTAAATATTATGTCGCGATAT
TTAAGCATTTATATAATTCCCGTATACTTTCTGTAACTTTAGGGAACTTG
CTGGCGTCAATGTTACTCAAACACGAAGACATGGTGTAGATTAGCAGACA
CATCCAGACGTGACCAATTCTTTACTTGTCAAAAAGATTCAGATTGTGCA
CACACCAGAGAACGAGGATTGTTAGGAAAACCTGCTAAGGAAGTTTGCGA
aatgaatttttctctttttagctcTGGGCCAATATGTCATGGATCAAATC
CTTAA Coding sequence (CDS) from alignment at sc0000668_pilon:39971..44175+ >XLOC_000961 ID=XLOC_000961|Name=XLOC_000961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=788bp|location=Sequence derived from alignment at sc0000668_pilon:39971..44175+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGACTCTAACCAAGGAAGGAATCTCTACCAAGCGCTACAAGATATGAT
TGATGAACGTGTGGCTGAAAAAATGGATCCTAAACATGAATGTAAATTCG
GAGGTCTATGTAACAACGTTTACAGCTATGGATGTCATAAGACGACTCTA
ACCAAGGAAGGAATCTCTACCAAGCGCTACAAGATATGATTGATGAACGT
GTGGCTGAAAAAATGGATCCTAAACATGAATGTAAATTCGGAGGTCTATG
TAACAACGTTTACAGCTATGGATGTCATAAAGTATGTGAAGAAATGTGAT
GGTTCAGGATGCACAGAAATCAGTATGTGAAGAAATGTGATGGTTCAGGA
TGCACAGAAATCGGAACTTGCTGGCGTCAATGTTACTCAAACACGAAGAC
ATGGTGTAGATTAGCAGACACATCCAGACGTGACCAATTCTTTACTTGTC
AAAAAGATTCAGATTGTGCACACACCAGAGAACGAGGATTGTTAGGAAAA
CCTGCTAAGGAAGTTTGCGAaatgaatttttctctttttagctcTGGGCC
AATATGTCATGGATCAAATCCTTAAGGAACTTGCTGGCGTCAATGTTACT
CAAACACGAAGACATGGTGTAGATTAGCAGACACATCCAGACGTGACCAA
TTCTTTACTTGTCAAAAAGATTCAGATTGTGCACACACCAGAGAACGAGG
ATTGTTAGGAAAACCTGCTAAGGAAGTTTGCGAaatgaatttttctcttt
ttagctcTGGGCCAATATGTCATGGATCAAATCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000668_pilon | genome | sc0000668_pilon:39971..44175 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 181-393:3993 |
| Aaloc | 142-180:3494 |
| Aaloc | 79-138:80 |
| Aaloc | 1-78:1 |
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