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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000316_pilon:347344..352076- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000883 ID=XLOC_000883|Name=XLOC_000883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4733bp|location=Sequence derived from alignment at sc0000316_pilon:347344..352076- (Clytia hemisphaerica_ch_hm2_pilon)
ACACATCTTGTAGCACAATTTGAACATCATCAACCGTTTATTTGTTGTCT
AATTTTTGCAATGGAGAAGGTAAACCCTGATGAAATGCTGCAATTCTTCA
ATCAAAAAAAGACTTATGAGGAAATCAAGCACATTTTGCAGAGTAGATTT
CCAGGTGAAAGAGGCTTTTCAATTATATCCATAAAGCGTTTTTGCAAAGA
TCATGGCATTTCACCACGCGTATCCACCAACTATTTGGAACATATCGTGG
CCACAGCAGCTGAAGAGGTAAATGTTCTTAAATGTATTTATTGAAACCCC
TGAGCCCTAACAGCCCTAACCCTAAGCAAGTAGTGGATTTTTTTCCATAC
ACTTCGTTGTTTTTCACACATAAACATAATTGTCTAAAAACCTGATTTTA
GAAGCCGGAAATTTTTAAAAATCACCGGAACAGCCGAGAATCGCCAGAAA
AACTATTTTTATTGAATTTCTCGAGCTGTACTTAATATTTTTTTATGAAA
TTTTTCAAACTGATGTGAAGTGACAATATCTAAAATGTGACGGAGCCCGA
TTTTCAAAAAAGTTTTTTTCCAGCCGAAAATGCCGGAAAAAATAGTTTTA
GGCATTTTCTTGAGATTTTATCATTAGTTTTCTCTGATTTTTTGTAAAAA
GATGCACATTAGCATTGCCCAAAACATGTTCAAGACCGGTTTGAAGAAAA
AATTTTTTTTGGCAGATGATAATGCCGGAAATGGCAGTTTTCGTTTTTTT
TGATGACCATTTGTATTTGTTTTTTTTGGACCTACCTGGACGGAGGTCCT
ATAAATTAAGCTGCGTTTGTTCGTTCGTTCGTTCGTTCTTCTGTTACCAA
CTTTCCTCAGGATTGAATCATAGGCATCTTTTCATTTTTGGTACAAAGGT
GCAAAATGGTGGTGGTCAAAATATGACGGAGCCCAATTTTCGAAAAAATA
ATTTTTGGTGCAAAAAACGGCTAAAAACAGGTTTTTCGGACTTAGTGAAA
AATTGGATCATTTATTTTTTCTGATTTTTTGCATGAAGTAGTGTATGATA
GCATAGGTAAAAGATGGTACGAGCAGATTTTGTATTTTTTAAACAAAGCG
AATGTGACGGAGCCGATTTTCAGAAAAAAGATTTTTTGGGTAAAATTTCA
GCCAAAAAACAGCTATAAAGAGGATTTTTTTCGACTAGGTGTATATTGGA
TCATGGAGTTTTTCTGAATTTCTGCATTAAAGAAGGTCAAAGATGGCTCA
AGCAGATTTTCACAAAATTTCTGCTTGTTCGTTTATTGTAAGGCCGGGGA
GGGGGTACTAGGGTTGGCGAATGAGGGGTGTGTGCGGACAGGACCTCCGA
AAACCGACCCTTAGAGAGACTGATTTTTGCTGAAAAGGTGACCCTTAGAG
AGACTTTTTGGATTAATTTTTTAGATTTTTAGAAAAAGTCATACCCTTAG
AGAGACCAAGGACACTTGTATTACAATTTTTTCTCTGGAAATCAAAAAAT
TTCCTAAAAATCCTGAATTTTCCGACCCTTAGAGAGACTAATTTAAAACT
TTCTGATTTTTCCAACCCTTAGAGAGACTTTGAAAGGTGAAAAAACCGAC
CCTTACCGTCCGCACATACCCATCATCCATTTTTGCCTACAAAAAAATTT
TACCCCACCGGTCTTTTTGATAAAGAACTGCGTAGTTATTCCGGACTTAA
CGGTCAATTTGAGATCCAAATTGGTCTAATCGCCAGTAGAACGCTCTCAG
AAGATTAGTTCAAAACTTCATTATTTATTTTTGGTAGGTTGGACCGACTT
ATGGAAGAAAGATGATGACAGGATATATAGCCCATAAACACCAATTACGC
GTTGGACATAACAGGATAGGTCAAGCATTAGCCCACGTTGCTCCACAGAA
TCACTTGGCGAGAAGAACAAACACAGCCCGCTTAGTTAACCCTATTCCAT
ATCGAGCAGATTATTTTGGACACAAAATACATTTTGATCAGAACGAGAAG
CTGGTTATGTATGGAGTAACTCATGTCATAGCCGTTGATGGTCATTCAAG
ATTTATTGTTGGATATACGACAATGCCCGTCAAAAATAATGGTATCATTT
ACAACGAAGTGTATAGGTAAAAAAGTCCAGGAAATAAGTCCATAATAAAC
GTACACGTACTACAGGTTTTGCTTCATAAGAACAAACAATTTAAACTTTT
TTTAAGAACAATTTTATAAGAACAATGAGGCTCAAAATCGCCAAAATACT
GGTTTTCAAAAAGTGTAAGGCTTTTGATGACCAAAATGTTCGGAACAAGT
TAAGAACATTTTAAAGCTTTTGGGAATCATGAACATGGGGAATTAAGGCA
GTCAGGCCAGCTGTGTGGACCTGACTGAATGACGGAAAGGTGCCCAATAG
TAAAACTTCAAATCAATTATCAAATACAAAACTTCGTGTGCAACTGATGA
CGTAATAAACACTCTTCAGACACTAAGGCACCTTTGAGCCAAATTCCAAC
AAAATACTATTTTTCAGGTTTAGGGCACTTTTTGAGCTATTTCCTGCAAA
CTAGTTTTAATAAGTATGCACTTTATAAGAATGTTCCTGAGGAAAATGGC
CAAAAAATTAAAAATGTGCGAAGAATATTACCATCATGAAATTTTGCTAC
AAAAATTCTGCAAAATATTTTATATTTCATTTCCCCAAAAAGTTAAGAAT
ATCCATGATAAAATGTAATGGACACCATTCTTATAAAAAGCGTGTATTTA
GGGGCTCAAATGAGAAACCAATCATGTGGCAATTAAAAACGAGTGCAGCG
AAACAGAAGAACGTTGCAAAATGTAAAATTAAATTAAATTAAATTAAATT
CCTAATTCTTATTTAGAAAAGCAGCGATGGACTTTGGAATATTTCATCAA
ATGAGGGCTGATTGCGGAAAAGAATTTTACCTATCACTTGGTATGCAAGA
ACTCTTCAAAGATTTGAGAAGTAGACATGACATTTTACCATATCGCCAGA
CACAATCAAAGCAGGTAAAATACCTTGTTTTCTACAGTATGATGTCAACA
AAAATTAGGCCTCTATCTTTGAAGCGGTACAGCTTTTTGAATTTTTGGTT
AAATTTGAATTTTTTCAGATTGCAATGTAGATTTTTTTAGCCATTTTGAA
AATATGAAATTTTATTAAAAATGTCAACAATTTTCGACAAAATTCAAGAT
TGAAACCCTGTTAGAGTTCAGTGGTTCCTTTAGCATCAATAATTTCATTT
TGTTTGTAAACCGTTTTAAATAGGAACTTGTCCAAAATGTCCAAAATTTC
CTGTCGATCTAAATTTCTCGTGTGCTCGAACACCCACGAAGGCACCAACC
CACGGACCCACGACACGCACGTAACCAACGTAATTTAGCTCACTCCTTCT
TTTGACAGGTCGTGATCGTAAAACTGTTAAGAACAGAATATTCTATCAGA
ATACTGAATATCTTTCTTCGTTAGGAGTGTAAAACCCCAACTAGAGTATG
GCCTAATAGCCTGGAGCTGTCTATGTGTAGACTACTTTCCTTTTTAACCC
TTTAAGTGCCATAGCTTTATTCAAATATAAAGACACTTTCTGTTTGCTGC
GGTTTTCCAGAAAAACTATTTTTGTTTGCCGATCACTTAAAAATTGGTCA
TTACGAAATGTAGTCAAGTATGCCAGATGCCTTAAAAAATGGTCATTTTC
TGTTATTATTTTATTTTCTGGTAAATGGAAAAAGTTTTCTGAAAAAACTC
TAAAGAGCAAATAAAGAGAAATTCGAGATGACCAGTTTTTAAGTCATCGG
CATACCTTTTACATTATCGGATGACCAGTTATTAAGTCATCGGCACTTAA
AGGGTTTATTAGATCCTATCATTCTTAGACTATTCTAAATGGATTTCTTT
TGGGCCGAAATTTACGTGAATGTTATTACTCAAAAAGAAATTTTTCAACC
TCGCCCCCGTGTATCCCCAGTCTTTATTTACGTTATTGATTGACCAAAAA
GCTGATGACGAGGGACGAGGTTGTATATTTTTCTGCTTTTAGAATCTACC
AGTTGAGAGAATCTGGCCAGAAGTTAACTCCCGTGTTAATTACCCACTAA
AACGCATATTGGCAGACTTAGATAACCGACATATCATTGACATGACAGAT
GAGACTCAAAGGTTTTGCGTTTCATCTGTAACATGCTTGGTTGCAGCTTT
TGGGTTGAGGACAGTTGTATCTTCTTGGAACGAACATCCAATAGCAGGTT
TGGGATATTCTAATTCTGATTTTATGTTGCAATCTCTACCTCTCTAGCGA
TACAAGAAATAACCAGCTCCTACTATGTTTCTTTTCTTATGCATAGAAAA
CCCTTCCAAACGCGAGAAATCTTTAAGATCCATATCTCCTAAGGAAGTTT
TTATATCACCTTTCAGGTCGAGGAATACCATCTGTTATTAAAACAAGAAC
AAACCGTTTGACTCCGACCCCACAAAATGGTTTACCACCCAAACAAGAAG
CTATAGAATTATACGAGCAGACTTATCAAGGCAGACTAACAGATGAACAT
CCTTTTGGACGTGACCCATTGACTGGACATGATGATATCATTTCCGAGAG
AGACCGATTATTTTTTCAAAGTTTTTCTGTCCAAGATATTTTTACTAATT
GTGTTAACCACAGGGGAAATATGTTTAGAGATGCTATAATGTTTTACATA
CGAACTACTTTACAATTTGAAGGAGCCTTGTAA Coding sequence (CDS) from alignment at sc0000316_pilon:347344..352076- >XLOC_000883 ID=XLOC_000883|Name=XLOC_000883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2532bp|location=Sequence derived from alignment at sc0000316_pilon:347344..352076- (Clytia hemisphaerica_ch_hm2_pilon)
ACACATCTTGTAGCACAATTTGAACATCATCAACCGTTTATTTGTTGTCT
AATTTTTGCAATGGAGAAGGTAAACCCTGATGAAATGCTGCAATTCTTCA
ATCAAAAAAAGACTTATGAGGAAATCAAGCACATTTTGCAGAGTAGATTT
CCAGGTGAAAGAGGCTTTTCAATTATATCCATAAAGCGTTTTTGCAAAGA
TCATGGCATTTCACCACGCGTATCCACCAACTATTTGGAACATATCGTGG
CCACAGCAGCTGAAGAGACACATCTTGTAGCACAATTTGAACATCATCAA
CCGTTTATTTGTTGTCTAATTTTTGCAATGGAGAAGGTAAACCCTGATGA
AATGCTGCAATTCTTCAATCAAAAAAAGACTTATGAGGAAATCAAGCACA
TTTTGCAGAGTAGATTTCCAGGTGAAAGAGGCTTTTCAATTATATCCATA
AAGCGTTTTTGCAAAGATCATGGCATTTCACCACGCGTATCCACCAACTA
TTTGGAACATATCGTGGCCACAGCAGCTGAAGAGGTTGGACCGACTTATG
GAAGAAAGATGATGACAGGATATATAGCCCATAAACACCAATTACGCGTT
GGACATAACAGGATAGGTCAAGCATTAGCCCACGTTGCTCCACAGAATCA
CTTGGCGAGAAGAACAAACACAGCCCGCTTAGTTAACCCTATTCCATATC
GAGCAGATTATTTTGGACACAAAATACATTTTGATCAGAACGAGAAGCTG
GTTATGTATGGAGTAACTCATGTCATAGCCGTTGATGGTCATTCAAGATT
TATTGTTGGATATACGACAATGCCCGTCAAAAATAATGGTATCATTTACA
ACGAAGTGTATAGGTTGGACCGACTTATGGAAGAAAGATGATGACAGGAT
ATATAGCCCATAAACACCAATTACGCGTTGGACATAACAGGATAGGTCAA
GCATTAGCCCACGTTGCTCCACAGAATCACTTGGCGAGAAGAACAAACAC
AGCCCGCTTAGTTAACCCTATTCCATATCGAGCAGATTATTTTGGACACA
AAATACATTTTGATCAGAACGAGAAGCTGGTTATGTATGGAGTAACTCAT
GTCATAGCCGTTGATGGTCATTCAAGATTTATTGTTGGATATACGACAAT
GCCCGTCAAAAATAATGGTATCATTTACAACGAAGTGTATAGAAAAGCAG
CGATGGACTTTGGAATATTTCATCAAATGAGGGCTGATTGCGGAAAAGAA
TTTTACCTATCACTTGGTATGCAAGAACTCTTCAAAGATTTGAGAAGTAG
ACATGACATTTTACCATATCGCCAGACACAATCAAAGCAGAAAAGCAGCG
ATGGACTTTGGAATATTTCATCAAATGAGGGCTGATTGCGGAAAAGAATT
TTACCTATCACTTGGTATGCAAGAACTCTTCAAAGATTTGAGAAGTAGAC
ATGACATTTTACCATATCGCCAGACACAATCAAAGCAGAATCTACCAGTT
GAGAGAATCTGGCCAGAAGTTAACTCCCGTGTTAATTACCCACTAAAACG
CATATTGGCAGACTTAGATAACCGACATATCATTGACATGACAGATGAGA
CTCAAAGGTTTTGCGTTTCATCTGTAACATGCTTGGTTGCAGCTTTTGGG
TTGAGGACAGTTGTATCTTCTTGGAACGAACATCCAATAGCAGAATCTAC
CAGTTGAGAGAATCTGGCCAGAAGTTAACTCCCGTGTTAATTACCCACTA
AAACGCATATTGGCAGACTTAGATAACCGACATATCATTGACATGACAGA
TGAGACTCAAAGGTTTTGCGTTTCATCTGTAACATGCTTGGTTGCAGCTT
TTGGGTTGAGGACAGTTGTATCTTCTTGGAACGAACATCCAATAGCAGGT
CGAGGAATACCATCTGTTATTAAAACAAGAACAAACCGTTTGACTCCGAC
CCCACAAAATGGTTTACCACCCAAACAAGAAGCTATAGAATTATACGAGC
AGACTTATCAAGGCAGACTAACAGATGAACATCCTTTTGGACGTGACCCA
TTGACTGGACATGATGATATCATTTCCGAGAGAGACCGATTATTTTTTCA
AAGTTTTTCTGTCCAAGATATTTTTACTAATTGTGTTAACCACAGGGGAA
ATATGTTTAGAGATGCTATAATGTTTTACATACGAACTACTTTACAATTT
GAAGGAGCCTTGTAAGTCGAGGAATACCATCTGTTATTAAAACAAGAACA
AACCGTTTGACTCCGACCCCACAAAATGGTTTACCACCCAAACAAGAAGC
TATAGAATTATACGAGCAGACTTATCAAGGCAGACTAACAGATGAACATC
CTTTTGGACGTGACCCATTGACTGGACATGATGATATCATTTCCGAGAGA
GACCGATTATTTTTTCAAAGTTTTTCTGTCCAAGATATTTTTACTAATTG
TGTTAACCACAGGGGAAATATGTTTAGAGATGCTATAATGTTTTACATAC
GAACTACTTTACAATTTGAAGGAGCCTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000316_pilon | genome | sc0000316_pilon:347344..352076 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1266:316 |
| Aaloc | 745-948:692 |
| Aaloc | 598-744:1867 |
| Aaloc | 268-594:2947 |
| Aaloc | 1-267:4734 |
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