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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000316_pilon:356130..358149+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000839 ID=XLOC_000839|Name=XLOC_000839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2020bp|location=Sequence derived from alignment at sc0000316_pilon:356130..358149+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCAGTCAAGATGACAAGTGCAGATATAAACCTAACCTTCTTCACAGA
AAATAATGGATCAAGGTCAGAACGAACATTTAGAAAAAGTCAAGTCACAG
TATCAAGACTTTCTACGGTATTTAAGGTGAGCTTTTACTGACCTTCTATC
ACTCATTTTGTAAACAGTTATGGTAATGAccgaaaatttaaaacagtcCA
ACATttaattctaaatattttttgagtccGATTAAAAGCAGAGCGGAAAG
ttgctgactctgcagaaaataagaaatatttattctaaaattttgggTTT
CaaaaaaaGTATTGAATTATTAATGAATTCCAGAGTGAGAAGAACAATTG
TGGCTTGGCTATGTTAAATACAactctctttttttattttttttagatcg
ACCAAGCGTCACTATTCATCACGGAAGAGTTCAGCGGACCATCTGAGTTC
CCAGACTCATCAGGAAATTTTCCCTCTCTTGACAACGTTAGGGTCGAAAC
AGTGTACGAAGTAGAAGGTGATTCTTTGACGATTCGTCCAATACCAAGCA
CGCCAAATACGCCAAGCACATCAGCCTATGAAATCCCATCGTCATCTTCA
GATCGACAAGGATCATCCTCATCTCCAGAATTTGGCGCATTTAGAAGATA
CAATTTGCCTGGGTAAGTCTAATATTTTTTAAGCTAACATTACAGAATCA
CGACTGGGTactgatttttttatgattttctttttgattttttttcaatg
attgcgttatttttacagatttttacattgattttttaactaattagata
cttttgatcataatctgatcataattattttttaaattctttaattggtt
tctatttctttttttgaaatgtttttctgATCATTTAATTAATGGTTCTG
ACTTTTGCAAAAATCTCAGCAAAAGAAGCAAGATTTATGTTGACGGAATT
CACTTCTTTCTTTTAGACCGGCTCACCGAAAAAGAGCAAGAGCTTCTCAA
GATTATTTATTAAAGATCTTTCTTGGCGACTTTGAAGGAAGAAAAATAGG
taattttaatatttctttttctctttttttattagaatactTAAATTTTG
GCATGTCAATTTTCAGTCCGAGTGTTCTTATCTAAACTAGgttctaaaat
caaaaagtatacaTTTTTTCCTTGTTATTATACTTTCCTTGAAAGAACGT
TTTGCAATATAGATAGCCAAATCATTTAAAATCACAGCCAGGTTGGGTTT
AAGTATCAAACATTGtaaatatcattgtttttctctGTTTGTACAGTATC
AACCAACAGAATGCAACATATTTCTATCAACGCATCAAATTCAAACGTTA
ACGCAATAACCGAAATGGCGCGCAATGTGTTTCAAATCGATGATTTGGTA
CTGGCCAGTGCAAGTGGATGTATCATTGAAGACACGGAGGTTACAAGAGG
TAATCATATTTTACTTGAAGTTTGACCAGATTTGGTGAGGGGTAAATCAA
CATGAAAAGTTGTgcgatattttttgattttttgactttatttctgactt
ttttatgttttattttactatttggactttagattttttgactttttcgc
gGAGATGTACTATAATTTAGTAATTTGAGTAATTTACTCCTCCAGATTCG
GTTCCAATTTTTCCTATTATTGTTTGCTCATCTCTTTTTGAAAGATTATA
TCGAATTAATTAATGGAATCTTATCTTTAACACCACGTCTggtaattttt
tctctaaaagatCATATTTGCTTCATaatcatttcaatatttctttCAGA
TTTCACTTTCTGGAGATCGGCTGCCAGGAAAATTTACGCAGTACAGGAGG
AACAATTTCAGAGACAGCCAACGTCTACAGCCCAGAGAGCAAGTTCTGAT
GACAACGCCAATCGAGAAATAATTGAAAAGCTAGATTCAATGGAGCGTAC
CATCGAGCGAAATTCTCTGATACCTAATATTCGAAACATCAGTGGACTTG
AAAACGCCATCTGGTCAACC Coding sequence (CDS) from alignment at sc0000316_pilon:356130..358149+ >XLOC_000839 ID=XLOC_000839|Name=XLOC_000839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000316_pilon:356130..358149+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCAGTCAAGATGACAAGTGCAGATATAAACCTAACCTTCTTCACAGA
AAATAATGGATCAAGGTCAGAACGAACATTTAGAAAAAGTCAAGTCACAG
TATCAAGACTTTCTACGGTATTTAAGGATGCAGTCAAGATGACAAGTGCA
GATATAAACCTAACCTTCTTCACAGAAAATAATGGATCAAGGTCAGAACG
AACATTTAGAAAAAGTCAAGTCACAGTATCAAGACTTTCTACGGTATTTA
AGatcgACCAAGCGTCACTATTCATCACGGAAGAGTTCAGCGGACCATCT
GAGTTCCCAGACTCATCAGGAAATTTTCCCTCTCTTGACAACGTTAGGGT
CGAAACAGTGTACGAAGTAGAAGGTGATTCTTTGACGATTCGTCCAATAC
CAAGCACGCCAAATACGCCAAGCACATCAGCCTATGAAATCCCATCGTCA
TCTTCAGATCGACAAGGATCATCCTCATCTCCAGAATTTGGCGCATTTAG
AAGATACAATTTGCCTGGatcgACCAAGCGTCACTATTCATCACGGAAGA
GTTCAGCGGACCATCTGAGTTCCCAGACTCATCAGGAAATTTTCCCTCTC
TTGACAACGTTAGGGTCGAAACAGTGTACGAAGTAGAAGGTGATTCTTTG
ACGATTCGTCCAATACCAAGCACGCCAAATACGCCAAGCACATCAGCCTA
TGAAATCCCATCGTCATCTTCAGATCGACAAGGATCATCCTCATCTCCAG
AATTTGGCGCATTTAGAAGATACAATTTGCCTGGACCGGCTCACCGAAAA
AGAGCAAGAGCTTCTCAAGATTATTTATTAAAGATCTTTCTTGGCGACTT
TGAAGGAAGAAAAATAGACCGGCTCACCGAAAAAGAGCAAGAGCTTCTCA
AGATTATTTATTAAAGATCTTTCTTGGCGACTTTGAAGGAAGAAAAATAG
TATCAACCAACAGAATGCAACATATTTCTATCAACGCATCAAATTCAAAC
GTTAACGCAATAACCGAAATGGCGCGCAATGTGTTTCAAATCGATGATTT
GGTACTGGCCAGTGCAAGTGGATGTATCATTGAAGACACGGAGGTTACAA
GAGTATCAACCAACAGAATGCAACATATTTCTATCAACGCATCAAATTCA
AACGTTAACGCAATAACCGAAATGGCGCGCAATGTGTTTCAAATCGATGA
TTTGGTACTGGCCAGTGCAAGTGGATGTATCATTGAAGACACGGAGGTTA
CAAGAGATTTCACTTTCTGGAGATCGGCTGCCAGGAAAATTTACGCAGTA
CAGGAGGAACAATTTCAGAGACAGCCAACGTCTACAGCCCAGAGAGCAAG
TTCTGATGACAACGCCAATCGAGAAATAATTGAAAAGCTAGATTCAATGG
AGCGTACCATCGAGCGAAATTCTCTGATACCTAATATTCGAAACATCAGT
GGACTTGAAAACGCCATCTGGTCAACCATTTCACTTTCTGGAGATCGGCT
GCCAGGAAAATTTACGCAGTACAGGAGGAACAATTTCAGAGACAGCCAAC
GTCTACAGCCCAGAGAGCAAGTTCTGATGACAACGCCAATCGAGAAATAA
TTGAAAAGCTAGATTCAATGGAGCGTACCATCGAGCGAAATTCTCTGATA
CCTAATATTCGAAACATCAGTGGACTTGAAAACGCCATCTGGTCAACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000316_pilon | genome | sc0000316_pilon:356130..358149 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 631-849:1802 |
| Aaloc | 478-627:1299 |
| Aaloc | 394-474:968 |
| Aaloc | 127-390:397 |
| Aaloc | 1-126:1 |
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